BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028743
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282625.1| PREDICTED: transcription factor bHLH106 [Vit...   248   2e-63
gb|ADL36594.1| BHLH domain class transcription factor [Malus x d...   236   5e-60
ref|XP_002517323.1| DNA binding protein, putative [Ricinus commu...   234   3e-59
gb|AFK46671.1| unknown [Medicago truncatula]                          232   1e-58
ref|XP_003624955.1| Transcription factor bHLH106 [Medicago trunc...   228   1e-57

>ref|XP_002282625.1| PREDICTED: transcription factor bHLH106 [Vitis vinifera]
           gi|297741653|emb|CBI32785.3| unnamed protein product
           [Vitis vinifera]
          Length = 239

 Score =  248 bits (633), Expect = 2e-63
 Identities = 142/234 (60%), Positives = 166/234 (70%), Gaps = 6/234 (2%)
 Frame = +2

Query: 95  MQPEYFPATSEFYRLVTSNNGMEQQFGPYCFVGD------PSFCGSSYYPFESSDITDLP 256
           MQPE  P  SEF R +  N  +    G Y F G+       SFC SS+YP E S I D+P
Sbjct: 1   MQPENTPEGSEFCRFLAGN--VLSDVGWYGFPGNCDFPAIQSFCSSSFYPSEVSGIADVP 58

Query: 257 QEAKALTASKNHREAEKRRRERINSHLNHLRSLLPCNSKTDKASLLAKVIQHVKELKQQA 436
           Q ++ALTAS NH+EAEKRRRERINSHL+ LRSLLPC+SKTDKASLLAKVIQ VKELK+Q 
Sbjct: 59  Q-SRALTASINHKEAEKRRRERINSHLDKLRSLLPCSSKTDKASLLAKVIQRVKELKEQT 117

Query: 437 MEISECELFPSETDEITXXXXXXXXXXXXXXXKASLCCEDRSDLLPELIETLKSLRLKTL 616
            EI++ E  PSETDEI                KASLCCEDR++LLPELIE LKSLRLKTL
Sbjct: 118 SEITQLETLPSETDEINVILSGDYSDDGKSIFKASLCCEDRTELLPELIEILKSLRLKTL 177

Query: 617 RAEMATLGGRIRNVLIVTGEEEDDQCNELIGFLREALKNLVDRSSSCDRLKRRR 778
           +AEMA+LGGRIRN+L+V+G  + D  +E +  LR+ALK LVD SSS  R KRRR
Sbjct: 178 KAEMASLGGRIRNILVVSG--DGDHSDESVHSLRDALKTLVDHSSSSGRSKRRR 229


>gb|ADL36594.1| BHLH domain class transcription factor [Malus x domestica]
          Length = 240

 Score =  236 bits (603), Expect = 5e-60
 Identities = 133/232 (57%), Positives = 161/232 (69%), Gaps = 8/232 (3%)
 Frame = +2

Query: 119 TSEFYRLVTSNNGMEQQFGPYCFVGDPSFCGSS-----YYPFESSDIT---DLPQEAKAL 274
           + E YR + + NG+      +      SFC SS     YYP E S ++   D   + +AL
Sbjct: 8   SQELYRFL-AQNGLISVNNDHQLSAMQSFCSSSSNNYSYYPLELSGVSTEHDASPQDRAL 66

Query: 275 TASKNHREAEKRRRERINSHLNHLRSLLPCNSKTDKASLLAKVIQHVKELKQQAMEISEC 454
            A KNH+EAEKRRRERINSHL+ LR LLPCNSKTDKASLLAKV+Q VKELKQQ  EI+E 
Sbjct: 67  AALKNHKEAEKRRRERINSHLDKLRGLLPCNSKTDKASLLAKVVQRVKELKQQTSEIAEL 126

Query: 455 ELFPSETDEITXXXXXXXXXXXXXXXKASLCCEDRSDLLPELIETLKSLRLKTLRAEMAT 634
           E FPSETDEIT               KASLCCEDRSDLLP+LIE LKSL LKT++AE+AT
Sbjct: 127 ETFPSETDEITVLSSNDYTNDGRIVFKASLCCEDRSDLLPDLIEILKSLHLKTIKAEIAT 186

Query: 635 LGGRIRNVLIVTGEEEDDQCNELIGFLREALKNLVDRSSSCDRLKRRRIVDG 790
           LGGRIRNVLIV  ++  D   E + FL+ ALK+L++RS+S +R KRRR++DG
Sbjct: 187 LGGRIRNVLIVAADK--DHTIESVNFLQNALKSLLERSNSSERSKRRRVLDG 236


>ref|XP_002517323.1| DNA binding protein, putative [Ricinus communis]
           gi|223543586|gb|EEF45116.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 237

 Score =  234 bits (597), Expect = 3e-59
 Identities = 134/236 (56%), Positives = 158/236 (66%), Gaps = 5/236 (2%)
 Frame = +2

Query: 95  MQPEYFPATSEFYRLVTSNNGMEQQFGPYCFVGDPSFCGSSY-----YPFESSDITDLPQ 259
           MQP+  P  S+ YR +  N       G        S C SS      YP E S ITD+  
Sbjct: 1   MQPDNSPEISQLYRFLAENGVFN--VGSCGLPAMQSLCSSSSSSYHNYPLEGSVITDMTP 58

Query: 260 EAKALTASKNHREAEKRRRERINSHLNHLRSLLPCNSKTDKASLLAKVIQHVKELKQQAM 439
           + +AL A KNH+EAEKRRRERINSHL+ LR LLPCNSKTDKASLLAKV+Q V+ELKQQ  
Sbjct: 59  QDRALAALKNHKEAEKRRRERINSHLDKLRGLLPCNSKTDKASLLAKVVQRVRELKQQTS 118

Query: 440 EISECELFPSETDEITXXXXXXXXXXXXXXXKASLCCEDRSDLLPELIETLKSLRLKTLR 619
           +I   + FPSETDEIT               KASLCCEDRSDLLP+LIE LKSL LKTL+
Sbjct: 119 QIPGLDSFPSETDEIT-VLSGEYSSDGQLIFKASLCCEDRSDLLPDLIEILKSLHLKTLK 177

Query: 620 AEMATLGGRIRNVLIVTGEEEDDQCNELIGFLREALKNLVDRSSSCDRLKRRRIVD 787
           AEM TLGGRIRNVLI+  E+  D   E + FL+ ALK+L++RS+S DR KRRR++D
Sbjct: 178 AEMVTLGGRIRNVLIIAAEK--DHSIESVHFLQTALKSLIERSNSSDRSKRRRVLD 231


>gb|AFK46671.1| unknown [Medicago truncatula]
          Length = 213

 Score =  232 bits (591), Expect = 1e-58
 Identities = 130/207 (62%), Positives = 155/207 (74%), Gaps = 9/207 (4%)
 Frame = +2

Query: 200 SFCGSS------YYPFESSDITDLP-QEAKALTASKNHREAEKRRRERINSHLNHLRSLL 358
           SFC SS      Y+PFE S+ITD P Q+ +AL A KNH+EAEKRRRERINSHL+HLR+LL
Sbjct: 5   SFCSSSDNNNNYYHPFEVSEITDTPSQQDRALAALKNHKEAEKRRRERINSHLDHLRTLL 64

Query: 359 PCNSKTDKASLLAKVIQHVKELKQQAMEISECELFPSETDEIT-XXXXXXXXXXXXXXXK 535
           PCNSKTDKASLLAKV++ VKELKQQ  +I++ E  PSETDEIT                +
Sbjct: 65  PCNSKTDKASLLAKVVERVKELKQQTSQITQLETVPSETDEITVISAGSDISGEGRLIFE 124

Query: 536 ASLCCEDRSDLLPELIETLKSLRLKTLRAEMATLGGRIRNVLIVTGEEEDDQCNELIGFL 715
           ASLCCEDRSDL+P+LIE LKSL LKTL+AEMATLGGR RNVL+V  E+E +   E I FL
Sbjct: 125 ASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATLGGRTRNVLVVAAEKEHNSI-ESIHFL 183

Query: 716 REALKNLVDRSSSC-DRLKRRRIVDGR 793
           + +L++L+DRSS C DR KRRR +D R
Sbjct: 184 QNSLRSLLDRSSGCNDRSKRRRGLDRR 210


>ref|XP_003624955.1| Transcription factor bHLH106 [Medicago truncatula]
           gi|355499970|gb|AES81173.1| Transcription factor bHLH106
           [Medicago truncatula]
          Length = 255

 Score =  228 bits (582), Expect = 1e-57
 Identities = 134/239 (56%), Positives = 167/239 (69%), Gaps = 15/239 (6%)
 Frame = +2

Query: 122 SEFYRLVTSNNGMEQQFG-PYCFVGDPSFCGSS------YYPFESSDITDLP-QEAKALT 277
           SE ++ + +NN    ++  P   +   SFC SS      Y+PFE S+ITD P Q+ +AL 
Sbjct: 15  SELFQFLVANNPSFFEYSTPSSTMMQQSFCSSSDNNNNYYHPFEVSEITDTPSQQDRALA 74

Query: 278 ASKNHREAEKRRRERINSHLNHLRSLLPCNSKT-----DKASLLAKVIQHVKELKQQAME 442
           A KNH+EAEKRRRERINSHL+HLR+LLPCNSK+     DKASLLAKV++ VK+LKQQ  +
Sbjct: 75  ALKNHKEAEKRRRERINSHLDHLRTLLPCNSKSLIITQDKASLLAKVVERVKDLKQQTSQ 134

Query: 443 ISECELFPSETDEITXXXXXXXXXXXXXXX-KASLCCEDRSDLLPELIETLKSLRLKTLR 619
           I++ E  PSETDEIT                KASLCCEDRSDL+P+LIE LKSL LKTL+
Sbjct: 135 ITQLETVPSETDEITVISAGSDISGEGRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLK 194

Query: 620 AEMATLGGRIRNVLIVTGEEEDDQCNELIGFLREALKNLVDRSSSC-DRLKRRRIVDGR 793
           AEMATLGGR RNVL+V  E+E +   E I FL+ +L++L+DRSS C DR KRRR +D R
Sbjct: 195 AEMATLGGRTRNVLVVAAEKEHNSI-ESIHFLQNSLRSLLDRSSGCNDRSKRRRGLDRR 252