BLASTX nr result

ID: Cimicifuga21_contig00028733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028733
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281016.2| PREDICTED: protein PLASTID MOVEMENT IMPAIRED...    95   5e-18
emb|CAN79831.1| hypothetical protein VITISV_041029 [Vitis vinifera]    95   5e-18
ref|XP_003554833.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED...    91   1e-16
ref|XP_003551836.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED...    89   4e-16
ref|XP_002528078.1| Myosin heavy chain, putative [Ricinus commun...    87   2e-15

>ref|XP_002281016.2| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Vitis
           vinifera]
          Length = 639

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 16/103 (15%)
 Frame = +2

Query: 59  STMENNKNKMKEIIHEIDRTKELETKLAVTTSDVDVLQNELKLVKAMGE----------- 205
           S ME  + KM +II EI+++K+LETKL+VTTSD+DVLQNELKL K + +           
Sbjct: 223 SAMEKTRKKMSDIIQEIEQSKDLETKLSVTTSDIDVLQNELKLAKKIDKSVQNNDSLKHT 282

Query: 206 --SFKRK---EISAEAGQDTEELEAANKELASIKEEGFQFMAS 319
             SF+R+   E SA     TEEL+AA KELASIKEEGF FM+S
Sbjct: 283 KGSFRRQEGSETSALLQSVTEELKAAKKELASIKEEGFDFMSS 325


>emb|CAN79831.1| hypothetical protein VITISV_041029 [Vitis vinifera]
          Length = 752

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 16/103 (15%)
 Frame = +2

Query: 59  STMENNKNKMKEIIHEIDRTKELETKLAVTTSDVDVLQNELKLVKAMGE----------- 205
           S ME  + KM +II EI+++K+LETKL+VTTSD+DVLQNELKL K + +           
Sbjct: 305 SAMEKTRKKMSDIIQEIEQSKDLETKLSVTTSDIDVLQNELKLAKKIDKSVQNNDSLKHT 364

Query: 206 --SFKRK---EISAEAGQDTEELEAANKELASIKEEGFQFMAS 319
             SF+R+   E SA     TEEL+AA KELASIKEEGF FM+S
Sbjct: 365 KGSFRRQEGSETSALLQSVTEELKAAKKELASIKEEGFDFMSS 407


>ref|XP_003554833.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Glycine max]
          Length = 610

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/99 (50%), Positives = 65/99 (65%), Gaps = 13/99 (13%)
 Frame = +2

Query: 62  TMENNKNKMKEIIHEIDRTKELETKLAVTTSDVDVLQNELKLVKAMGESFKRK------E 223
           T+EN +NK+KE I EID TKELE KLA T SD+D+L+NELK VK  G+    +       
Sbjct: 230 TVENTRNKLKEAIEEIDETKELEMKLATTLSDIDMLKNELKFVKKTGKRVHERGGESMEH 289

Query: 224 ISAEAGQDT-------EELEAANKELASIKEEGFQFMAS 319
           I  +  +D        EE+EAA K+LASI+E+GF+FMAS
Sbjct: 290 IEEDQSRDVGVLEATKEEIEAAKKDLASIREQGFKFMAS 328


>ref|XP_003551836.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Glycine max]
          Length = 615

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 16/101 (15%)
 Frame = +2

Query: 65  MENNKNKMKEIIHEIDRTKELETKLAVTTSDVDVLQNELKLVKAMGE------SFKRKEI 226
           +E+ + K+KE I EID +KELE KLAVT SDVD LQNELK VK M +      S K+ E 
Sbjct: 209 LESTRRKLKEAIEEIDESKELEMKLAVTISDVDFLQNELKSVKEMDKRVQGDGSAKQLEG 268

Query: 227 SAEAGQD----------TEELEAANKELASIKEEGFQFMAS 319
             + G++          TEELEAA KELA ++EEGFQFMAS
Sbjct: 269 RFKKGEESEDSIVLQTITEELEAARKELALVREEGFQFMAS 309


>ref|XP_002528078.1| Myosin heavy chain, putative [Ricinus communis]
           gi|223532539|gb|EEF34328.1| Myosin heavy chain, putative
           [Ricinus communis]
          Length = 650

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 53/101 (52%), Positives = 64/101 (63%), Gaps = 16/101 (15%)
 Frame = +2

Query: 65  MENNKNKMKEIIHEIDRTKELETKLAVTTSDVDVLQNELKLVKAM-------------GE 205
           ME  + KMK    EID +KEL++KLAVT +DVDVLQNELK+VK +             G 
Sbjct: 227 MEKTREKMKVANEEIDHSKELQSKLAVTLTDVDVLQNELKVVKEIEKKVLRNDSLKHSGG 286

Query: 206 SFKRK---EISAEAGQDTEELEAANKELASIKEEGFQFMAS 319
           SF+R    E S       EELEAA +EL+S+KEEGFQFMAS
Sbjct: 287 SFQRSNELEDSRPLSSIAEELEAAKEELSSVKEEGFQFMAS 327


Top