BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028708
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...   114   6e-24
ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22
ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat...   109   3e-22
ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   108   3e-22

>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/102 (56%), Positives = 76/102 (74%)
 Frame = -1

Query: 322 VEDALSLFDQMLQRKPSPSIWSFNQLLGSLSRMKQYSTVFSMYNRMTHSLELQPDFYTLN 143
           ++DALSLF++ML+ +P PSI  F++LL S++RMK YSTV S+Y +M  S  +  + YTLN
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMD-SFGIPHNTYTLN 93

Query: 142 YLINCLCYLGRVDCGFSVLGDILKRGHEPSIVTLTTLIRGLC 17
            LIN  C+L R+   FSVLGDILK G++PS  T TTLIRGLC
Sbjct: 94  ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLC 135


>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
           gi|297735515|emb|CBI17955.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/100 (50%), Positives = 75/100 (75%)
 Frame = -1

Query: 316 DALSLFDQMLQRKPSPSIWSFNQLLGSLSRMKQYSTVFSMYNRMTHSLELQPDFYTLNYL 137
           +A S+F+ ++  +P+P I SFN LLG+++++K+Y  V S+Y RM+  + L PDF TLN L
Sbjct: 75  EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMS-LIGLAPDFITLNIL 133

Query: 136 INCLCYLGRVDCGFSVLGDILKRGHEPSIVTLTTLIRGLC 17
           INC C L +VD G +VLG++L+RGH P+ VT T+L++GLC
Sbjct: 134 INCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLC 173


>ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/102 (54%), Positives = 70/102 (68%)
 Frame = -1

Query: 322 VEDALSLFDQMLQRKPSPSIWSFNQLLGSLSRMKQYSTVFSMYNRMTHSLELQPDFYTLN 143
           ++DALS F++ML   P PS   FN+LL S+++ KQY TVFS+ N+M  S  + PD YTLN
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMD-SFGIPPDVYTLN 108

Query: 142 YLINCLCYLGRVDCGFSVLGDILKRGHEPSIVTLTTLIRGLC 17
            LIN  C+L R+   FSVL  ILK GH+P   T TTLIRGLC
Sbjct: 109 ILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLC 150



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/107 (28%), Positives = 63/107 (58%)
 Frame = -1

Query: 322 VEDALSLFDQMLQRKPSPSIWSFNQLLGSLSRMKQYSTVFSMYNRMTHSLELQPDFYTLN 143
           V +A +LF +M+ +  SP I+++  L+ SL  + ++  V ++ N+M +S ++ PD    +
Sbjct: 225 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS-KIMPDVVIFS 283

Query: 142 YLINCLCYLGRVDCGFSVLGDILKRGHEPSIVTLTTLIRGLCSVNEV 2
            +++ LC  G++     V+  ++ RG EP++VT   L+ G C  +E+
Sbjct: 284 TVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 330


>ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/110 (51%), Positives = 77/110 (70%), Gaps = 3/110 (2%)
 Frame = -1

Query: 322 VEDALSLFDQMLQRKPSPSIWSFNQLLGSLSRMKQYSTVFSMYNRMTHSLEL---QPDFY 152
           V+DA+S F++ML  + +P I  FN++L S ++MK YSTV      ++H LEL   QPD +
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTV-----SLSHRLELKGIQPDLF 94

Query: 151 TLNYLINCLCYLGRVDCGFSVLGDILKRGHEPSIVTLTTLIRGLCSVNEV 2
           TLN LINC C++G++  GFSVL  ILKRG+ PS VTL TLI+GLC   +V
Sbjct: 95  TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQV 144


>ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/110 (49%), Positives = 77/110 (70%), Gaps = 3/110 (2%)
 Frame = -1

Query: 322 VEDALSLFDQMLQRKPSPSIWSFNQLLGSLSRMKQYSTVFSMYNRMTHSLEL---QPDFY 152
           V+DA+S F+ ML  + +P +  FN++L S + MK YST  S+    +H LEL   QPDF+
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSL----SHRLELKGIQPDFF 106

Query: 151 TLNYLINCLCYLGRVDCGFSVLGDILKRGHEPSIVTLTTLIRGLCSVNEV 2
           TLN L+NC C++G+++ GFSVL  ILKRG++P  +T TTLI+GLC   +V
Sbjct: 107 TLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQV 156