BLASTX nr result

ID: Cimicifuga21_contig00028672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028672
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532343.1| LIGULELESS1 protein, putative [Ricinus commu...    62   6e-08
ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vi...    58   7e-07
gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]          58   7e-07
emb|CBI30036.3| unnamed protein product [Vitis vinifera]               58   7e-07
emb|CAN63786.1| hypothetical protein VITISV_000286 [Vitis vinifera]    58   7e-07

>ref|XP_002532343.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223527960|gb|EEF30045.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 349

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -2

Query: 321 GLGQVSQPVTNHFSGELELAQHGDRQYMELGNSRDFGSSTQ-MHWS 187
           GLGQ+SQP   HF+GELEL+Q   RQYMEL +SR + SSTQ M+WS
Sbjct: 303 GLGQISQPPNGHFAGELELSQQNRRQYMELDHSRAYDSSTQHMNWS 348


>ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vitis vinifera]
          Length = 379

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = -2

Query: 321 GLGQVSQPVTNHFSGELELAQHGDRQYMELGNSRDFGSST-QMHWS 187
           GLGQ+SQP+ + FSG  EL Q   RQYMEL +SR + SST QMHWS
Sbjct: 333 GLGQISQPINSQFSGGGELPQQSGRQYMELEHSRAYDSSTQQMHWS 378


>gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]
          Length = 378

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = -2

Query: 321 GLGQVSQPVTNHFSGELELAQHGDRQYMELGNSRDFGSST-QMHWS 187
           GLGQ+SQP+ + FSG  EL Q   RQYMEL +SR + SST QMHWS
Sbjct: 332 GLGQISQPINSQFSGGGELPQQSGRQYMELEHSRAYDSSTQQMHWS 377


>emb|CBI30036.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = -2

Query: 321 GLGQVSQPVTNHFSGELELAQHGDRQYMELGNSRDFGSST-QMHWS 187
           GLGQ+SQP+ + FSG  EL Q   RQYMEL +SR + SST QMHWS
Sbjct: 303 GLGQISQPINSQFSGGGELPQQSGRQYMELEHSRAYDSSTQQMHWS 348


>emb|CAN63786.1| hypothetical protein VITISV_000286 [Vitis vinifera]
          Length = 52

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = -2

Query: 321 GLGQVSQPVTNHFSGELELAQHGDRQYMELGNSRDFGSST-QMHWS 187
           GLGQ+SQP+ + FSG  EL Q   RQYMEL +SR + SST QMHWS
Sbjct: 6   GLGQISQPINSQFSGGGELPQQSGRQYMELEHSRAYDSSTQQMHWS 51


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