BLASTX nr result

ID: Cimicifuga21_contig00028643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028643
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880096.1| hypothetical protein ARALYDRAFT_903838 [Arab...   115   5e-24
ref|XP_004135896.1| PREDICTED: uncharacterized protein LOC101218...   114   1e-23
ref|NP_181951.3| uncharacterized protein [Arabidopsis thaliana] ...   113   1e-23
gb|AAC16073.1| hypothetical protein [Arabidopsis thaliana]            113   1e-23
ref|XP_004167021.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   111   5e-23

>ref|XP_002880096.1| hypothetical protein ARALYDRAFT_903838 [Arabidopsis lyrata subsp.
           lyrata] gi|297325935|gb|EFH56355.1| hypothetical protein
           ARALYDRAFT_903838 [Arabidopsis lyrata subsp. lyrata]
          Length = 241

 Score =  115 bits (287), Expect = 5e-24
 Identities = 65/142 (45%), Positives = 83/142 (58%), Gaps = 3/142 (2%)
 Frame = +2

Query: 56  MRRNTLFLAMVVFIVFNASSVLGGRTALEEHLDVKEELESLNKPAVKTIKSEDGDIIDCI 235
           MR     +A++V  V     V G        + V   L+  NKP VK+IKSEDGD+IDC+
Sbjct: 1   MRMTGFIVAVMVTAVIFVICVDGNEFFDHREIKVLRHLKRFNKPTVKSIKSEDGDVIDCV 60

Query: 236 DIYKQPALDHPLLQNHTIRMRPSAYPKAGKRF---PLKSINQHLLRNGESCPAGTVPILR 406
            I  QPA DHPLL+NHTI+MRPS YP +   +     K+I Q   + GE CP  TVPI R
Sbjct: 61  PITNQPAFDHPLLKNHTIQMRPSFYPVSDSTYTKKEAKAITQVWHKTGE-CPKNTVPIRR 119

Query: 407 TKEHDLLLDASFKSFGTRNVMS 472
           TK+ DLL   S +SFG ++  S
Sbjct: 120 TKKEDLLRPKSIRSFGRKSHQS 141


>ref|XP_004135896.1| PREDICTED: uncharacterized protein LOC101218833 [Cucumis sativus]
          Length = 418

 Score =  114 bits (284), Expect = 1e-23
 Identities = 66/156 (42%), Positives = 91/156 (58%), Gaps = 15/156 (9%)
 Frame = +2

Query: 71  LFLAMVVFIVFNASSVLGGRTALEEH------LDVKEELESLNKPAVKTIKSEDGDIIDC 232
           LFL M+V +       +GG+T L  H      L+V   L+ LNKPAVK+IKS DGDIIDC
Sbjct: 9   LFLLMLVSLTL---PTVGGKTTLHRHRHRRRRLEVHSHLKKLNKPAVKSIKSPDGDIIDC 65

Query: 233 IDIYKQPALDHPLLQNHTIRMRPSAYPKAG---------KRFPLKSINQHLLRNGESCPA 385
           + +  QPA DHPLL+NHTI+MRP+ +P+ G         K    + I Q     G+ CP 
Sbjct: 66  VRMAHQPAFDHPLLKNHTIQMRPTFHPEGGILSDSKVSIKGSKSEDITQLWHLKGK-CPK 124

Query: 386 GTVPILRTKEHDLLLDASFKSFGTRNVMSSLDSTDV 493
           GT+PI RTK+ D+L   S KS+G +   +++    +
Sbjct: 125 GTIPIRRTKKEDILRGNSVKSYGKKKPYATVKPNSI 160


>ref|NP_181951.3| uncharacterized protein [Arabidopsis thaliana]
           gi|330255299|gb|AEC10393.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 403

 Score =  113 bits (283), Expect = 1e-23
 Identities = 62/142 (43%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
 Frame = +2

Query: 56  MRRNTLFLAMVVFIVFNASSVLGGRTALEEHLDVKEELESLNKPAVKTIKSEDGDIIDCI 235
           MR     +AM++      + V G +      + V   L+  NKPA+K+IKSEDGD+IDC+
Sbjct: 2   MRMTGFIVAMMIAAAIFTTCVDGNKFFYHREIKVLRHLKRFNKPALKSIKSEDGDVIDCV 61

Query: 236 DIYKQPALDHPLLQNHTIRMRPSAYPKAGKRF---PLKSINQHLLRNGESCPAGTVPILR 406
            I  QPA DH LL+NHTI+MRPS YP +   +     K++ Q   + GE CP  TVPI R
Sbjct: 62  PITNQPAFDHHLLKNHTIQMRPSFYPVSDSTYTKREAKAVTQVWHKAGE-CPKNTVPIRR 120

Query: 407 TKEHDLLLDASFKSFGTRNVMS 472
           TK+ DLL   S +SFG ++  S
Sbjct: 121 TKKEDLLRPKSIRSFGRKSHQS 142


>gb|AAC16073.1| hypothetical protein [Arabidopsis thaliana]
          Length = 402

 Score =  113 bits (283), Expect = 1e-23
 Identities = 62/142 (43%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
 Frame = +2

Query: 56  MRRNTLFLAMVVFIVFNASSVLGGRTALEEHLDVKEELESLNKPAVKTIKSEDGDIIDCI 235
           MR     +AM++      + V G +      + V   L+  NKPA+K+IKSEDGD+IDC+
Sbjct: 1   MRMTGFIVAMMIAAAIFTTCVDGNKFFYHREIKVLRHLKRFNKPALKSIKSEDGDVIDCV 60

Query: 236 DIYKQPALDHPLLQNHTIRMRPSAYPKAGKRF---PLKSINQHLLRNGESCPAGTVPILR 406
            I  QPA DH LL+NHTI+MRPS YP +   +     K++ Q   + GE CP  TVPI R
Sbjct: 61  PITNQPAFDHHLLKNHTIQMRPSFYPVSDSTYTKREAKAVTQVWHKAGE-CPKNTVPIRR 119

Query: 407 TKEHDLLLDASFKSFGTRNVMS 472
           TK+ DLL   S +SFG ++  S
Sbjct: 120 TKKEDLLRPKSIRSFGRKSHQS 141


>ref|XP_004167021.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101230521, partial [Cucumis sativus]
          Length = 244

 Score =  111 bits (278), Expect = 5e-23
 Identities = 64/156 (41%), Positives = 92/156 (58%), Gaps = 15/156 (9%)
 Frame = +2

Query: 71  LFLAMVVFIVFNASSVLGGRTALEEH------LDVKEELESLNKPAVKTIKSEDGDIIDC 232
           LFL +++ +  +  +V GG+T L  H      L+V   L+ LNKPAVK+IKS DGDIIDC
Sbjct: 7   LFLFLLMLVSLSLPTV-GGKTTLHRHRLRRRRLEVHSHLKKLNKPAVKSIKSPDGDIIDC 65

Query: 233 IDIYKQPALDHPLLQNHTIRMRPSAYPKAG---------KRFPLKSINQHLLRNGESCPA 385
           + +  QPA DHPLL+NHTI+MRP+ +P+ G         K    + I Q     G+ CP 
Sbjct: 66  VRMAHQPAFDHPLLKNHTIQMRPTFHPEGGILSDSKVSLKGSKSEDITQLWHLKGK-CPK 124

Query: 386 GTVPILRTKEHDLLLDASFKSFGTRNVMSSLDSTDV 493
           GT+PI R K+ D+L   S KS+G +   +++    +
Sbjct: 125 GTIPIRRXKKEDILRGNSVKSYGKKKPYATVKPNSI 160


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