BLASTX nr result

ID: Cimicifuga21_contig00028640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028640
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Sela...    96   3e-18
ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Sela...    96   3e-18
ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
gb|ELR22110.1| Rrm3p helicase [Acanthamoeba castellanii str. Neff]     79   3e-13

>ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|222840828|gb|EEE78375.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/70 (71%), Positives = 58/70 (82%)
 Frame = +3

Query: 3   AVSIHKCQGMTLDCLHTDLARAFGYGMVYVALSRARSLKGIYLSGFDSLKIKAHPKVLEF 182
           A+SIHKCQGMTLD   TDL+RAFGYGMVYVALSR RSL+G++LSGF   KIKAHPKVL F
Sbjct: 412 AISIHKCQGMTLDHAQTDLSRAFGYGMVYVALSRVRSLEGLHLSGFTPSKIKAHPKVLLF 471

Query: 183 YENHLVS*IS 212
           Y++   S +S
Sbjct: 472 YKSFTSSNLS 481


>ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Selaginella moellendorffii]
           gi|300156832|gb|EFJ23459.1| hypothetical protein
           SELMODRAFT_451567 [Selaginella moellendorffii]
          Length = 580

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = +3

Query: 3   AVSIHKCQGMTLDCLHTDLARAFGYGMVYVALSRARSLKGIYLSGFDSLKIKAHPKVLEF 182
           A+S+HKCQGMTLDC+ TDL+R F YGMVYVALSR RSL G+ L GFD LKI+ HP+V+ F
Sbjct: 514 ALSVHKCQGMTLDCVETDLSRTFEYGMVYVALSRVRSLHGLRLLGFDPLKIRVHPEVVTF 573

Query: 183 YE 188
           Y+
Sbjct: 574 YD 575


>ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Selaginella moellendorffii]
           gi|300144841|gb|EFJ11522.1| hypothetical protein
           SELMODRAFT_451566 [Selaginella moellendorffii]
          Length = 580

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = +3

Query: 3   AVSIHKCQGMTLDCLHTDLARAFGYGMVYVALSRARSLKGIYLSGFDSLKIKAHPKVLEF 182
           A+S+HKCQGMTLDC+ TDL+R F YGMVYVALSR RSL G+ L GFD LKI+ HP+V+ F
Sbjct: 514 ALSVHKCQGMTLDCVETDLSRTFEYGMVYVALSRVRSLHGLRLLGFDPLKIRVHPEVVTF 573

Query: 183 YE 188
           Y+
Sbjct: 574 YD 575


>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
           gi|223540444|gb|EEF42013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 512

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/62 (69%), Positives = 53/62 (85%)
 Frame = +3

Query: 3   AVSIHKCQGMTLDCLHTDLARAFGYGMVYVALSRARSLKGIYLSGFDSLKIKAHPKVLEF 182
           A+SIHKCQGMT+DCL+TDL+R+F YGMVY  LSR R++KGI LSGF+   IKA+PKVL F
Sbjct: 396 ALSIHKCQGMTIDCLYTDLSRSFIYGMVYAVLSRGRTMKGIQLSGFEPSMIKANPKVLHF 455

Query: 183 YE 188
           Y+
Sbjct: 456 YD 457


>gb|ELR22110.1| Rrm3p helicase [Acanthamoeba castellanii str. Neff]
          Length = 805

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/61 (57%), Positives = 49/61 (80%)
 Frame = +3

Query: 3   AVSIHKCQGMTLDCLHTDLARAFGYGMVYVALSRARSLKGIYLSGFDSLKIKAHPKVLEF 182
           A+SIHK QGMTL  +  +L+  F YG  YVALSRA++L+G+YL GF++ K++AHP+VLE+
Sbjct: 673 ALSIHKSQGMTLSKVEMNLSHVFAYGQAYVALSRAQNLEGLYLMGFEAGKVRAHPRVLEY 732

Query: 183 Y 185
           Y
Sbjct: 733 Y 733


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