BLASTX nr result

ID: Cimicifuga21_contig00028518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028518
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271597.1| PREDICTED: protein SENSITIVITY TO RED LIGHT ...   365   1e-98
emb|CAN76600.1| hypothetical protein VITISV_012927 [Vitis vinifera]   362   1e-97
emb|CBI24338.3| unnamed protein product [Vitis vinifera]              347   4e-93
ref|XP_002297744.1| predicted protein [Populus trichocarpa] gi|2...   339   9e-91
ref|XP_002304791.1| predicted protein [Populus trichocarpa] gi|2...   338   1e-90

>ref|XP_002271597.1| PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Vitis
            vinifera]
          Length = 269

 Score =  365 bits (937), Expect = 1e-98
 Identities = 176/267 (65%), Positives = 212/267 (79%), Gaps = 1/267 (0%)
 Frame = +3

Query: 378  MAASTKSLKPKHTNAFGDWTIVTPRRGKQKTRILH-KTETVEQQPWAPTDYDLDPKRESN 554
            MAAS K++  + ++A  DWT+V PRRGK++   L  K     QQPWAPTD ++D  RES 
Sbjct: 1    MAASAKTITLESSDAISDWTVVLPRRGKRRRNFLKSKHPEQHQQPWAPTDLEMDLHRESK 60

Query: 555  LTQKMQTCLTKLEKSEFYQAFLDRIQTPEVLNSFSRILASENKMQMVIYGIGSIESYETP 734
            L QK+Q C+ KL  S FY   LD++QTP +L +F R+L SE KMQMV+YGIGSIESYE P
Sbjct: 61   LMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLRVLGSELKMQMVVYGIGSIESYEPP 120

Query: 735  RLQLSLAILIKRRFDWIGDIEVFDPVLSTTETRVLEALGCSVLLVNEQGRRQALKPTMFF 914
            RLQLSLAIL+KR+F WIGDI+VFDP+LS TE+RVLEALGCSVL VNEQGRRQA KPT+FF
Sbjct: 121  RLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQASKPTLFF 180

Query: 915  MPHCEAVLYDNLLQANWGAEQLNQMVLFGNSFATYEEHMSEFKNSTLVDSTRYILGARRF 1094
            MPHCEA LYDNLLQ NW  E++N +VLFGNSF TYE+H+SEF++STLVDS+R+IL  R+F
Sbjct: 181  MPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHILAVRKF 240

Query: 1095 AVEVGINIVSDDFFRAFHDSSWHFFNL 1175
              E  I  VSDD+F AFHDSSWHFF+L
Sbjct: 241  TREFAIKTVSDDYFGAFHDSSWHFFSL 267


>emb|CAN76600.1| hypothetical protein VITISV_012927 [Vitis vinifera]
          Length = 269

 Score =  362 bits (929), Expect = 1e-97
 Identities = 175/267 (65%), Positives = 210/267 (78%), Gaps = 1/267 (0%)
 Frame = +3

Query: 378  MAASTKSLKPKHTNAFGDWTIVTPRRGKQKTRILH-KTETVEQQPWAPTDYDLDPKRESN 554
            MAAS K++  + ++A  DWT+V P RGK +   L  K     QQPWAPTD ++D  RES 
Sbjct: 1    MAASAKTITLESSDAISDWTVVLPXRGKXRRNFLKSKHPEQHQQPWAPTDLEMDLHRESK 60

Query: 555  LTQKMQTCLTKLEKSEFYQAFLDRIQTPEVLNSFSRILASENKMQMVIYGIGSIESYETP 734
            L QK+Q C+ KL  S FY   LD++QTP +L +F R+L SE KMQMV+YGIGSIESYE P
Sbjct: 61   LMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLRVLGSELKMQMVVYGIGSIESYEPP 120

Query: 735  RLQLSLAILIKRRFDWIGDIEVFDPVLSTTETRVLEALGCSVLLVNEQGRRQALKPTMFF 914
            RLQLSLAIL+KR+F WIGDI+VFDP+LS TE+RVLEALGCSVL VNEQGRRQA KPT+FF
Sbjct: 121  RLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQASKPTLFF 180

Query: 915  MPHCEAVLYDNLLQANWGAEQLNQMVLFGNSFATYEEHMSEFKNSTLVDSTRYILGARRF 1094
            MPHCEA LYDNLLQ NW  E++N +VLFGNSF TYE+H+SEF++STLVDS+R+IL  R+F
Sbjct: 181  MPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHILAVRKF 240

Query: 1095 AVEVGINIVSDDFFRAFHDSSWHFFNL 1175
              E  I  VSDD+F AFHDSSWHFF+L
Sbjct: 241  TREFAIKTVSDDYFGAFHDSSWHFFSL 267


>emb|CBI24338.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  347 bits (889), Expect = 4e-93
 Identities = 170/267 (63%), Positives = 205/267 (76%), Gaps = 1/267 (0%)
 Frame = +3

Query: 378  MAASTKSLKPKHTNAFGDWTIVTPRRGKQKTRILH-KTETVEQQPWAPTDYDLDPKRESN 554
            MAAS K++  + ++A  DWT+V PRRGK++   L  K     QQPWAPTD ++D  RES 
Sbjct: 1    MAASAKTITLESSDAISDWTVVLPRRGKRRRNFLKSKHPEQHQQPWAPTDLEMDLHRESK 60

Query: 555  LTQKMQTCLTKLEKSEFYQAFLDRIQTPEVLNSFSRILASENKMQMVIYGIGSIESYETP 734
            L QK+Q C+ KL  S FY   LD++QTP +L +F R         MV+YGIGSIESYE P
Sbjct: 61   LMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLR---------MVVYGIGSIESYEPP 111

Query: 735  RLQLSLAILIKRRFDWIGDIEVFDPVLSTTETRVLEALGCSVLLVNEQGRRQALKPTMFF 914
            RLQLSLAIL+KR+F WIGDI+VFDP+LS TE+RVLEALGCSVL VNEQGRRQA KPT+FF
Sbjct: 112  RLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQASKPTLFF 171

Query: 915  MPHCEAVLYDNLLQANWGAEQLNQMVLFGNSFATYEEHMSEFKNSTLVDSTRYILGARRF 1094
            MPHCEA LYDNLLQ NW  E++N +VLFGNSF TYE+H+SEF++STLVDS+R+IL  R+F
Sbjct: 172  MPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHILAVRKF 231

Query: 1095 AVEVGINIVSDDFFRAFHDSSWHFFNL 1175
              E  I  VSDD+F AFHDSSWHFF+L
Sbjct: 232  TREFAIKTVSDDYFGAFHDSSWHFFSL 258


>ref|XP_002297744.1| predicted protein [Populus trichocarpa] gi|222845002|gb|EEE82549.1|
            predicted protein [Populus trichocarpa]
          Length = 277

 Score =  339 bits (869), Expect = 9e-91
 Identities = 171/275 (62%), Positives = 212/275 (77%), Gaps = 2/275 (0%)
 Frame = +3

Query: 378  MAASTK-SLKPKHTNAFGDWTIVTPRRGKQKT-RILHKTETVEQQPWAPTDYDLDPKRES 551
            MAAS K  +  KHT    DWT+V PRRGK++T    + T   +QQPW PT+ + DP RE 
Sbjct: 1    MAASAKLPVTDKHTKN-EDWTVVLPRRGKRRTCSRRNSTPEAKQQPWVPTELESDPDREL 59

Query: 552  NLTQKMQTCLTKLEKSEFYQAFLDRIQTPEVLNSFSRILASENKMQMVIYGIGSIESYET 731
             L QKM+ C+ K+E S+FYQ FL+ ++ P++LNSF ++L  E +M MVIYGIGSIESYET
Sbjct: 60   KLIQKMEICIKKVESSQFYQNFLELVENPDILNSFHKVLGLELEMPMVIYGIGSIESYET 119

Query: 732  PRLQLSLAILIKRRFDWIGDIEVFDPVLSTTETRVLEALGCSVLLVNEQGRRQALKPTMF 911
            PR QLSLAIL+KR+F+WIGD+EVFDP+LS TE+RVLE+LGCSVL VNEQGRR+A KPT+F
Sbjct: 120  PRFQLSLAILMKRKFNWIGDVEVFDPILSATESRVLESLGCSVLSVNEQGRRRATKPTLF 179

Query: 912  FMPHCEAVLYDNLLQANWGAEQLNQMVLFGNSFATYEEHMSEFKNSTLVDSTRYILGARR 1091
            +MPHCEA LY+NLLQANW  E LN +VLFGNSF  Y E +SE KNS +VDST +IL AR+
Sbjct: 180  YMPHCEAELYNNLLQANWELELLNHIVLFGNSFEMY-EFLSEIKNSFIVDSTGHILAARK 238

Query: 1092 FAVEVGINIVSDDFFRAFHDSSWHFFNLDPQMEVE 1196
            FA E  + I SDD+F AFHDSSWHFF+  P ++ E
Sbjct: 239  FADEHVLKIASDDYFAAFHDSSWHFFS--PALDTE 271


>ref|XP_002304791.1| predicted protein [Populus trichocarpa] gi|222842223|gb|EEE79770.1|
            predicted protein [Populus trichocarpa]
          Length = 277

 Score =  338 bits (868), Expect = 1e-90
 Identities = 169/274 (61%), Positives = 207/274 (75%), Gaps = 1/274 (0%)
 Frame = +3

Query: 378  MAASTKSLKPKHTNAFGDWTIVTPRRGKQKTRIL-HKTETVEQQPWAPTDYDLDPKRESN 554
            M AS K L     +   +WT+V PRRGK++   L H T   EQQPW PT+ + DP+RE+ 
Sbjct: 1    MTASAKLLALDKPSQNENWTVVMPRRGKKRIHSLRHNTPEAEQQPWVPTELESDPEREAK 60

Query: 555  LTQKMQTCLTKLEKSEFYQAFLDRIQTPEVLNSFSRILASENKMQMVIYGIGSIESYETP 734
            L QKM+ C+ K+E S FYQ FL++++ PE+L+SF R+L  E KM MVIYGIGSIESYETP
Sbjct: 61   LIQKMEFCIKKVESSRFYQNFLEQVENPEILDSFHRVLGFELKMPMVIYGIGSIESYETP 120

Query: 735  RLQLSLAILIKRRFDWIGDIEVFDPVLSTTETRVLEALGCSVLLVNEQGRRQALKPTMFF 914
            R QLSLAIL+KR+F WIGDIEVFDP+LS TE+RVLE+LGCSVL VNEQGRR+A KP +F+
Sbjct: 121  RFQLSLAILMKRKFCWIGDIEVFDPILSATESRVLESLGCSVLSVNEQGRRRATKPMLFY 180

Query: 915  MPHCEAVLYDNLLQANWGAEQLNQMVLFGNSFATYEEHMSEFKNSTLVDSTRYILGARRF 1094
            MPHCEA LY+NLLQANW  E LN +VLFGNSF  Y E  SE KNS +V+ST ++L AR+F
Sbjct: 181  MPHCEAGLYNNLLQANWELELLNHIVLFGNSFEMY-EFFSEIKNSIVVESTMHVLAARKF 239

Query: 1095 AVEVGINIVSDDFFRAFHDSSWHFFNLDPQMEVE 1196
            A E  I   SDD+F AFHDSSWHFF+  P ++ E
Sbjct: 240  ANEYVIKTASDDYFAAFHDSSWHFFS--PALDTE 271


Top