BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028338
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    62   5e-08
gb|ABA91837.2| retrotransposon protein, putative, unclassified [...    62   5e-08

>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|62733115|gb|AAX95232.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 1324

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -3

Query: 193 MKILSWNCRGCGNQSTVLHILDLLNSENPDILFLSETKFSASKMSILNLKFAFPNI 26
           MKI++WNCRG GN  TV  +L+L   ++PDILFLS TK   +K+     K   PN+
Sbjct: 448 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNL 503


>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1301

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -3

Query: 193 MKILSWNCRGCGNQSTVLHILDLLNSENPDILFLSETKFSASKMSILNLKFAFPNI 26
           MKI++WNCRG GN  TV  +L+L   ++PDILFLS TK   +K+     K   PN+
Sbjct: 425 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNL 480