BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027968
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256...   210   3e-52
ref|XP_002514634.1| conserved hypothetical protein [Ricinus comm...   207   1e-51
ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|2...   193   3e-47
ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arab...   183   3e-44
ref|NP_565080.1| Mitochondrial transcription termination factor ...   182   5e-44

>ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256963 [Vitis vinifera]
           gi|297734077|emb|CBI15324.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  210 bits (534), Expect = 3e-52
 Identities = 117/242 (48%), Positives = 159/242 (65%), Gaps = 5/242 (2%)
 Frame = -1

Query: 712 MVTRVLTRPISHRL--IPNFQRTPLCPFQTIRHFSPSFQSTPKFTEKSQYRERILLANLL 539
           M  RVL RP  H L  I  FQ        T+     S   +P+    S +R++I L NL 
Sbjct: 1   MAIRVLARPAVHNLKSIVAFQTPKPQSLSTVNQIPVSRNISPQ----SPFRKQISLFNLF 56

Query: 538 QRYGFPPSHVPDFIGKNRFLLNFSLLDVEKSLGILLSFKLPQKSIVSILSTCPGVLELGF 359
           QR+GFPPS +  F+ KN+   N++LL++EKSLGIL SF++PQK I+S++S CP +LE  F
Sbjct: 57  QRHGFPPSQLHGFLKKNQIFQNYNLLELEKSLGILFSFQIPQKFILSLISDCPRLLEFEF 116

Query: 358 LKKWEMGFSELGISTISPTLIQSVLEHSTRLCIEPTDLCRSLHSLKDLGFSDETVIKVLE 179
           LKKWEMG ++LG+S +SP +I++VLE S R  ++P D+ R +  LK LGFSD TV ++LE
Sbjct: 117 LKKWEMGIAKLGVSGVSPLMIRNVLEFSRRFELDPDDVSRCVKVLKGLGFSDGTVDRILE 176

Query: 178 GFPRVITMKSRDIVRMIDFLKGFLRVP---VDGICYSFPMVLGLGIDHRLKPLLNEFESL 8
            FPRVI     +I R I FL G + +P   +DGI +S P +LGLGI+ RL+PLL+EF  L
Sbjct: 177 EFPRVIMSNESEIQRKIQFLLG-IGIPESGIDGIFHSLPGILGLGIEDRLEPLLDEFGKL 235

Query: 7   GF 2
           GF
Sbjct: 236 GF 237


>ref|XP_002514634.1| conserved hypothetical protein [Ricinus communis]
           gi|223546238|gb|EEF47740.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 450

 Score =  207 bits (528), Expect = 1e-51
 Identities = 114/239 (47%), Positives = 153/239 (64%), Gaps = 2/239 (0%)
 Frame = -1

Query: 712 MVTRVLTRPISHRLIPNFQRTPLCPFQTIRHFSPSFQSTPKFTEKSQYRERILLANLLQR 533
           MVT+ L R    R +   +  P  P+   R  S    + P F  +SQYR+ I LAN+ QR
Sbjct: 1   MVTKTLIRTTLSRFMSPTKLIPAHPYARTRFLS----TKPNFLNQSQYRKHISLANIFQR 56

Query: 532 YGFPPSHVPDFIGKNRFLLNFSLLDVEKSLGILLSFKLPQKSIVSILSTCPGVLELGFLK 353
           YGFPPS +  FI  N FLLN +L D+EKSLGILLSFK+PQK +VS+++ CP +L+  FLK
Sbjct: 57  YGFPPSQLHSFISANHFLLNSNLHDIEKSLGILLSFKIPQKVLVSLITECPSILDFEFLK 116

Query: 352 KWEMGFSELGISTISPTLIQSVLEHSTRLCIEPTDLCRSLHSLKDLGFSDETVIKVLEGF 173
            W++ FS+    +ISP +I+SVL HS R  I+P +  ++ + LK L FS  T+ +VLE F
Sbjct: 117 TWKICFSKYRDLSISPLVIKSVLAHSKRFQIDPDEFEKNANVLKGLSFSQGTIRRVLEDF 176

Query: 172 PRVITMKSRDIVRMIDFL--KGFLRVPVDGICYSFPMVLGLGIDHRLKPLLNEFESLGF 2
           P VITMK  +I   I+FL   G  +  V+ I  SFP+ LG GI +RL PL++EFE LGF
Sbjct: 177 PGVITMKRSEIYSRIEFLMRTGIPKDEVESIFSSFPLALGFGIKNRLMPLIDEFEGLGF 235


>ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|222866206|gb|EEF03337.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  193 bits (491), Expect = 3e-47
 Identities = 104/196 (53%), Positives = 134/196 (68%), Gaps = 3/196 (1%)
 Frame = -1

Query: 580 KSQYRERILLANLLQRYGFPPSHVPDFIGKNRFLLNFSLLDVEKSLGILLS-FKLPQKSI 404
           +S YR++I L+ LLQRYGFPPS +  F+ +N FLLN +L D EKSLG+L S FK+P KS+
Sbjct: 2   QSLYRKQISLSTLLQRYGFPPSQLQTFLSRNHFLLNSNLHDTEKSLGMLTSSFKIPHKSV 61

Query: 403 VSILSTCPGVLELGFLKKWEMGFSELGISTISPTLIQSVLEHSTRLCIEPTDLCRSLHSL 224
           VS++  CPGVL+  FLK+WE G S+     + P LI++VLEHS +  I+P     +L  L
Sbjct: 62  VSLIIDCPGVLDFDFLKRWEFGLSKFADLGVPPLLIKTVLEHSKKFQIDPDRFNETLKVL 121

Query: 223 KDLGFSDETVIKVLEGFPRVITMKSRDIVRMIDFLK--GFLRVPVDGICYSFPMVLGLGI 50
           K LGFS+ T  +VLEGFP VI +K  +I R I FL   G  R  VD +  SFP VLG GI
Sbjct: 122 KGLGFSESTTRRVLEGFPGVIALKECEIHRRIQFLMAIGIPRDGVDRVFNSFPEVLGFGI 181

Query: 49  DHRLKPLLNEFESLGF 2
           ++RL PLLNEF+ LGF
Sbjct: 182 ENRLMPLLNEFKDLGF 197


>ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp.
           lyrata] gi|297334807|gb|EFH65225.1| hypothetical protein
           ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  183 bits (465), Expect = 3e-44
 Identities = 102/218 (46%), Positives = 136/218 (62%), Gaps = 8/218 (3%)
 Frame = -1

Query: 631 TIRHFSPSFQSTPKFT-----EKSQYRERILLANLLQRYGFPPSHVPDFIGKNRFLLNFS 467
           T+ H S S  S P         +S YR+RILLANLL RYGFPPS +  F+ +N  LLN  
Sbjct: 18  TLLHQSRSLSSNPSSRILTPINQSHYRKRILLANLLHRYGFPPSSLQHFLSRNNHLLNLD 77

Query: 466 LLDVEKSLGILLSFKLPQKSIVSILSTCPGVLELGFLKKWEMGFSELGISTISPTLIQSV 287
           L++ E SLGILLS K+PQKS+VS++  CP VL   FL+KW +   + G   +S + I+SV
Sbjct: 78  LVETEASLGILLSLKIPQKSLVSLICDCPNVLRSEFLRKWRVPLFDCGKHGVSSSAIKSV 137

Query: 286 LEHSTRLCIEPTDLCRSLHSLKDLGFSDETVIKVLEGFPRVITMKSRDIVRMIDFLKGFL 107
           LEHS+R+ I P      +  LK LGF D TV ++L  FP V+ +   +I R I+FL G +
Sbjct: 138 LEHSSRIGIGPDKFYECIRVLKGLGFCDSTVSRILSSFPGVLLVNEIEIHRKIEFLVG-I 196

Query: 106 RVPVDGI---CYSFPMVLGLGIDHRLKPLLNEFESLGF 2
            +P D I    + FP VLG+G + RLKPLL+EF  +GF
Sbjct: 197 DIPRDNIERFFHVFPEVLGIGTETRLKPLLDEFIKMGF 234


>ref|NP_565080.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|12323819|gb|AAG51878.1|AC079678_8 unknown protein;
           33994-35331 [Arabidopsis thaliana]
           gi|332197431|gb|AEE35552.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 445

 Score =  182 bits (463), Expect = 5e-44
 Identities = 105/224 (46%), Positives = 139/224 (62%), Gaps = 3/224 (1%)
 Frame = -1

Query: 664 NFQRTPLCPFQTIRHFSPSFQSTPKFTEKSQYRERILLANLLQRYGFPPSHVPDFIGKNR 485
           N +  P+  F  IR  S     TP    +S YR+RILLANLLQRYGFPPS +  F+ +N 
Sbjct: 10  NLRDYPITLFNQIRSLSSRIL-TP--INQSHYRKRILLANLLQRYGFPPSSLQHFLSRNN 66

Query: 484 FLLNFSLLDVEKSLGILLSFKLPQKSIVSILSTCPGVLELGFLKKWEMGFSELG-ISTIS 308
            LLN  L++ E SLGILLS K+PQKS+VS++S CP VL   FL+KW +  S  G    +S
Sbjct: 67  HLLNSDLVETEISLGILLSLKIPQKSLVSLISDCPNVLRSEFLRKWRVPLSNCGKHGVVS 126

Query: 307 PTLIQSVLEHSTRLCIEPTDLCRSLHSLKDLGFSDETVIKVLEGFPRVITMKSRDIVRMI 128
            + I+SVLEHS+R+ I P      +  LK LGF D TV ++L  FP V+ +   +I R I
Sbjct: 127 SSAIKSVLEHSSRIGIGPDKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVNEIEIRRKI 186

Query: 127 DFLK--GFLRVPVDGICYSFPMVLGLGIDHRLKPLLNEFESLGF 2
           +FL   G  R  ++   + FP VLG+G + RLKPLL+EF  +GF
Sbjct: 187 EFLVGIGIARDNIERFFHVFPEVLGIGTETRLKPLLDEFMKMGF 230