BLASTX nr result

ID: Cimicifuga21_contig00027950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027950
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
gb|EEE60423.1| hypothetical protein OsJ_13625 [Oryza sativa Japo...   134   6e-30
ref|NP_001052089.1| Os04g0129200 [Oryza sativa Japonica Group] g...   134   6e-30
ref|XP_002522809.1| 3'-5' exonuclease, putative [Ricinus communi...   134   8e-30
ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndr...   134   1e-29

>ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|222839339|gb|EEE77676.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/107 (64%), Positives = 82/107 (76%)
 Frame = -2

Query: 323 VLHIIHSGIPPILQSLLEDPKYVKVGFCIAGDARKVLKDYNVRIKSLEDLSGLANQKLDG 144
           V+HI HSGI P LQ LLED K VKVG  I GD  KV +DYN  +KS+EDLS LANQKLDG
Sbjct: 185 VMHIFHSGITPSLQFLLEDSKLVKVGIGIGGDCAKVFRDYNASVKSVEDLSYLANQKLDG 244

Query: 143 FGRGRSLASLTEVLTCKQLEKPNKIRLGNWEVKVLSRDQLHYAATDA 3
             +   L +L ++L CK+L+KPNKIRLGNW+V VLS++QL YAATDA
Sbjct: 245 KPKTWGLQALAKILVCKELQKPNKIRLGNWQVDVLSKEQLQYAATDA 291


>gb|EEE60423.1| hypothetical protein OsJ_13625 [Oryza sativa Japonica Group]
          Length = 290

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/107 (61%), Positives = 82/107 (76%)
 Frame = -2

Query: 323 VLHIIHSGIPPILQSLLEDPKYVKVGFCIAGDARKVLKDYNVRIKSLEDLSGLANQKLDG 144
           V+HIIHSG+PP+L+SLLED   VKVG CI  DARK+  DY+V ++ L DLS LAN KL  
Sbjct: 164 VMHIIHSGVPPVLKSLLEDSSSVKVGICIDNDARKMFNDYDVHVQPLMDLSNLANAKLGF 223

Query: 143 FGRGRSLASLTEVLTCKQLEKPNKIRLGNWEVKVLSRDQLHYAATDA 3
             +  SLASLTE++TC++L KP+ IR+GNWE  VLS+ QL YAATDA
Sbjct: 224 PPKRWSLASLTEMVTCRELPKPSNIRMGNWEAYVLSKQQLQYAATDA 270


>ref|NP_001052089.1| Os04g0129200 [Oryza sativa Japonica Group]
           gi|38346519|emb|CAE03814.2| OSJNBa0027H09.14 [Oryza
           sativa Japonica Group] gi|113563660|dbj|BAF14003.1|
           Os04g0129200 [Oryza sativa Japonica Group]
           gi|116317897|emb|CAH65924.1| OSIGBa0131J24.2 [Oryza
           sativa Indica Group]
          Length = 298

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/107 (61%), Positives = 82/107 (76%)
 Frame = -2

Query: 323 VLHIIHSGIPPILQSLLEDPKYVKVGFCIAGDARKVLKDYNVRIKSLEDLSGLANQKLDG 144
           V+HIIHSG+PP+L+SLLED   VKVG CI  DARK+  DY+V ++ L DLS LAN KL  
Sbjct: 164 VMHIIHSGVPPVLKSLLEDSSSVKVGICIDNDARKMFNDYDVHVQPLMDLSNLANAKLGF 223

Query: 143 FGRGRSLASLTEVLTCKQLEKPNKIRLGNWEVKVLSRDQLHYAATDA 3
             +  SLASLTE++TC++L KP+ IR+GNWE  VLS+ QL YAATDA
Sbjct: 224 PPKRWSLASLTEMVTCRELPKPSNIRMGNWEAYVLSKQQLQYAATDA 270


>ref|XP_002522809.1| 3'-5' exonuclease, putative [Ricinus communis]
           gi|223538047|gb|EEF39660.1| 3'-5' exonuclease, putative
           [Ricinus communis]
          Length = 149

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/107 (63%), Positives = 82/107 (76%)
 Frame = -2

Query: 323 VLHIIHSGIPPILQSLLEDPKYVKVGFCIAGDARKVLKDYNVRIKSLEDLSGLANQKLDG 144
           V+HIIHSGIP  LQSLLED   +KVG  +  D+ KV  DYNV +K++EDLS LA +K+ G
Sbjct: 12  VMHIIHSGIPKSLQSLLEDSALLKVGVGVGNDSVKVFTDYNVSVKAVEDLSYLARKKIGG 71

Query: 143 FGRGRSLASLTEVLTCKQLEKPNKIRLGNWEVKVLSRDQLHYAATDA 3
             +  SL SLTE+L CK+L KPNKIRLGNWEV VLS++QL YAATDA
Sbjct: 72  KPKSWSLQSLTEMLVCKELGKPNKIRLGNWEVDVLSKEQLEYAATDA 118


>ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndrome-like
           exonuclease-like [Vitis vinifera]
          Length = 331

 Score =  134 bits (336), Expect = 1e-29
 Identities = 72/107 (67%), Positives = 80/107 (74%)
 Frame = -2

Query: 323 VLHIIHSGIPPILQSLLEDPKYVKVGFCIAGDARKVLKDYNVRIKSLEDLSGLANQKLDG 144
           V+HIIHSGIP  L SLLEDP  +KVG  IA DA KV KD++V +K LEDLS LANQKL G
Sbjct: 188 VMHIIHSGIPRNLXSLLEDPTSIKVGVGIANDAVKVFKDHSVSVKDLEDLSYLANQKLGG 247

Query: 143 FGRGRSLASLTEVLTCKQLEKPNKIRLGNWEVKVLSRDQLHYAATDA 3
             +   L SLTE+L  KQL KPNKIRLGNWE  VLS+ QL YAATDA
Sbjct: 248 DAKKWGLGSLTEMLISKQLLKPNKIRLGNWEADVLSKAQLEYAATDA 294


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