BLASTX nr result

ID: Cimicifuga21_contig00027918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027918
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624562.1| INO80 complex subunit D [Medicago truncatula...    92   4e-17
ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vit...    86   2e-15
ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vit...    86   3e-15
ref|XP_004139660.1| PREDICTED: uncharacterized protein LOC101209...    83   3e-14
ref|XP_003518163.1| PREDICTED: uncharacterized protein LOC100785...    81   1e-13

>ref|XP_003624562.1| INO80 complex subunit D [Medicago truncatula]
           gi|355499577|gb|AES80780.1| INO80 complex subunit D
           [Medicago truncatula]
          Length = 233

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
 Frame = -2

Query: 390 QQIETESMAPFTINGAEEDLILSKSEFLTREEVIKRRYRRLKLDIQVYEDYYWALMEDYR 211
           QQ   + +AP TI+GA+EDL L+ S  LTR EV+ RR RR++   + Y  +YWALME+ +
Sbjct: 5   QQQPPQQIAPMTIDGADEDLALAASSVLTRREVLVRRLRRVRQLSRCYRGHYWALMEELK 64

Query: 210 VKHREYYWNYGKSPFXXXXXXXXXXXXXXXNFIEGTDENGKLGLGFSENXXXXXXXXGKN 31
            K+REYYW YG+SPF                  +  +E    G+  S N          +
Sbjct: 65  AKYREYYWTYGRSPF------------------KEDEERNSNGVRDSGNASAAGAFDNGD 106

Query: 30  N--RCAYNGCKS 1
           +  RCAY GCK+
Sbjct: 107 DFVRCAYTGCKT 118


>ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 237

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
 Frame = -2

Query: 336 DLILSKSEFLTREEVIKRRYRRLKLDIQVYEDYYWALMEDYRVKHREYYWNYGKSPFXXX 157
           D +LS S +LTR+EVI+RR RR+K   + Y  +YW+LM++ ++++REYYW YG+S F   
Sbjct: 16  DAVLSSSRYLTRQEVIRRRSRRVKQLAKCYRAHYWSLMQELKIRYREYYWKYGRSAFQED 75

Query: 156 XXXXXXXXXXXXNFIEGTDEN----GK--LGLGFSENXXXXXXXXGKNNRCAYNGCKS 1
                         +EGT EN    GK  LGLG  EN            RCA +GCKS
Sbjct: 76  EKREGEG-------VEGTGENLNGHGKLGLGLGIGENGFDV-------KRCAVSGCKS 119


>ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 248

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
 Frame = -2

Query: 336 DLILSKSEFLTREEVIKRRYRRLKLDIQVYEDYYWALMEDYRVKHREYYWNYGKSPFXXX 157
           D +LS S +LTR+EVI+RR RR+K   + Y  +YW+LM++ ++++REYYW YG+S F   
Sbjct: 16  DAVLSSSRYLTRQEVIRRRSRRVKQLSKCYRAHYWSLMQELKIRYREYYWKYGRSAFQED 75

Query: 156 XXXXXXXXXXXXNFIEGTDEN----GK--LGLGFSENXXXXXXXXGKNNRCAYNGCKS 1
                         +EGT EN    GK  LGLG  EN            RCA +GCKS
Sbjct: 76  EKREGEG-------VEGTGENLNGHGKLGLGLGIGENGFDV-------KRCAVSGCKS 119


>ref|XP_004139660.1| PREDICTED: uncharacterized protein LOC101209765 [Cucumis sativus]
           gi|449527331|ref|XP_004170665.1| PREDICTED:
           uncharacterized protein LOC101225651 [Cucumis sativus]
          Length = 241

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/121 (37%), Positives = 65/121 (53%)
 Frame = -2

Query: 363 PFTINGAEEDLILSKSEFLTREEVIKRRYRRLKLDIQVYEDYYWALMEDYRVKHREYYWN 184
           P  I+GA+ D  L+ S   +R EV++RR RR K   +++++ YW L+E+ + K+REYYW 
Sbjct: 19  PILIDGADRDRALATSMICSRREVLERRSRRAKQLCRIFKELYWFLLEELKRKYREYYWT 78

Query: 183 YGKSPFXXXXXXXXXXXXXXXNFIEGTDENGKLGLGFSENXXXXXXXXGKNNRCAYNGCK 4
           YGKSPF               ++ EG  ENGKLGL  +           +  RC   GCK
Sbjct: 79  YGKSPF----KEDEKEAEGIGDYPEGIGENGKLGLASATG-------SDEIRRCDVTGCK 127

Query: 3   S 1
           +
Sbjct: 128 A 128


>ref|XP_003518163.1| PREDICTED: uncharacterized protein LOC100785208 [Glycine max]
           gi|356502267|ref|XP_003519941.1| PREDICTED:
           uncharacterized protein LOC100782023 [Glycine max]
          Length = 233

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/66 (57%), Positives = 47/66 (71%)
 Frame = -2

Query: 363 PFTINGAEEDLILSKSEFLTREEVIKRRYRRLKLDIQVYEDYYWALMEDYRVKHREYYWN 184
           P TI G E D  LSKS  LTREEV++RR RR++   + Y  +YWALME+ R K+R+Y W 
Sbjct: 13  PVTIEGGECDAALSKSRVLTREEVLRRRLRRVRQLGRCYRAHYWALMEELRSKYRDYCWT 72

Query: 183 YGKSPF 166
           YGKSPF
Sbjct: 73  YGKSPF 78


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