BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027905
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi...    96   4e-24
emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]    96   4e-24
ref|XP_002530609.1| pentatricopeptide repeat-containing protein,...    90   5e-20
ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containi...    85   4e-19
emb|CBI41046.3| unnamed protein product [Vitis vinifera]               96   3e-18

>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score = 95.9 bits (237), Expect(2) = 4e-24
 Identities = 49/70 (70%), Positives = 52/70 (74%)
 Frame = -1

Query: 283 TTLTACANLHDTLSGNQLHTQVIHTGYKAYPHVANTLLSLYAKSNDLNSVKQVFEEFANP 104
           +TLTACANL    SGNQLH   I TG KAY HV NTLLS YAKS DL SV++VF E  NP
Sbjct: 58  STLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENP 117

Query: 103 DVYSCTTLLS 74
           DVYS TTLLS
Sbjct: 118 DVYSWTTLLS 127



 Score = 40.4 bits (93), Expect(2) = 4e-24
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -3

Query: 77  INSWTTLLSAYTKSGQVDYACYLF 6
           + SWTTLLSA TK GQ+ YAC+LF
Sbjct: 119 VYSWTTLLSACTKLGQIGYACHLF 142


>emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
          Length = 690

 Score = 95.9 bits (237), Expect(2) = 4e-24
 Identities = 49/70 (70%), Positives = 52/70 (74%)
 Frame = -1

Query: 283 TTLTACANLHDTLSGNQLHTQVIHTGYKAYPHVANTLLSLYAKSNDLNSVKQVFEEFANP 104
           +TLTACANL    SGNQLH   I TG KAY HV NTLLS YAKS DL SV++VF E  NP
Sbjct: 64  STLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENP 123

Query: 103 DVYSCTTLLS 74
           DVYS TTLLS
Sbjct: 124 DVYSWTTLLS 133



 Score = 40.4 bits (93), Expect(2) = 4e-24
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -3

Query: 77  INSWTTLLSAYTKSGQVDYACYLF 6
           + SWTTLLSA TK GQ+ YAC+LF
Sbjct: 125 VYSWTTLLSACTKLGQIGYACHLF 148


>ref|XP_002530609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529857|gb|EEF31789.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 684

 Score = 89.7 bits (221), Expect(2) = 5e-20
 Identities = 45/70 (64%), Positives = 52/70 (74%)
 Frame = -1

Query: 283 TTLTACANLHDTLSGNQLHTQVIHTGYKAYPHVANTLLSLYAKSNDLNSVKQVFEEFANP 104
           TTLTACANL DT  GN+LH   I +  K Y HVANTLLSLYAK+ +++SVK VF E  NP
Sbjct: 71  TTLTACANLCDTTFGNKLHAYAIKSSLKTYTHVANTLLSLYAKAKEIDSVKWVFGETENP 130

Query: 103 DVYSCTTLLS 74
           DVYS  TL+S
Sbjct: 131 DVYSYATLVS 140



 Score = 32.7 bits (73), Expect(2) = 5e-20
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -3

Query: 77  INSWTTLLSAYTKSGQVDYACYLFE 3
           + S+ TL+SA  K G VDYAC LF+
Sbjct: 132 VYSYATLVSACAKLGHVDYACVLFD 156


>ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Cucumis sativus]
          Length = 735

 Score = 84.7 bits (208), Expect(2) = 4e-19
 Identities = 42/70 (60%), Positives = 48/70 (68%)
 Frame = -1

Query: 283 TTLTACANLHDTLSGNQLHTQVIHTGYKAYPHVANTLLSLYAKSNDLNSVKQVFEEFANP 104
           TTL  CAN  D   G+QLH   I +G K YPHVANT+LSLYAK  D  S+K+ F+E   P
Sbjct: 65  TTLAVCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKP 124

Query: 103 DVYSCTTLLS 74
           DVYS TTLLS
Sbjct: 125 DVYSWTTLLS 134



 Score = 34.7 bits (78), Expect(2) = 4e-19
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 77  INSWTTLLSAYTKSGQVDYACYLFE 3
           + SWTTLLSA TK G ++YA  +F+
Sbjct: 126 VYSWTTLLSACTKMGHIEYASEMFD 150


>emb|CBI41046.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score = 95.9 bits (237), Expect(2) = 3e-18
 Identities = 49/70 (70%), Positives = 52/70 (74%)
 Frame = -1

Query: 283 TTLTACANLHDTLSGNQLHTQVIHTGYKAYPHVANTLLSLYAKSNDLNSVKQVFEEFANP 104
           +TLTACANL    SGNQLH   I TG KAY HV NTLLS YAKS DL SV++VF E  NP
Sbjct: 64  STLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENP 123

Query: 103 DVYSCTTLLS 74
           DVYS TTLLS
Sbjct: 124 DVYSWTTLLS 133



 Score = 20.8 bits (42), Expect(2) = 3e-18
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 77  INSWTTLLSA 48
           + SWTTLLSA
Sbjct: 125 VYSWTTLLSA 134