BLASTX nr result

ID: Cimicifuga21_contig00027881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027881
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307092.1| predicted protein [Populus trichocarpa] gi|2...   182   7e-44
ref|XP_002310568.1| predicted protein [Populus trichocarpa] gi|2...   180   3e-43
ref|XP_002866887.1| hypothetical protein ARALYDRAFT_490769 [Arab...   175   9e-42
ref|NP_195694.1| uncharacterized protein [Arabidopsis thaliana] ...   175   9e-42
ref|XP_002533203.1| conserved hypothetical protein [Ricinus comm...   172   7e-41

>ref|XP_002307092.1| predicted protein [Populus trichocarpa] gi|222856541|gb|EEE94088.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  182 bits (461), Expect = 7e-44
 Identities = 98/176 (55%), Positives = 108/176 (61%)
 Frame = -1

Query: 684 IYFSILAFASLVTGLEPLKFFYASSQSSYICLQVLQTXXXXXXXXXXXXXXXXXYSTETG 505
           IYF+IL  +SLVTGLEPLKFFYA+SQS+Y+CL VLQT                 +STE G
Sbjct: 278 IYFTILCLSSLVTGLEPLKFFYATSQSTYVCLMVLQTLGYALYLLLLLMYLILVFSTECG 337

Query: 504 IGLKVLGLGQTIVGCAVGLHYYVSVFHRAVLHQPPKTNWKIHGIYATCFLXXXXXXXXXX 325
           +  K LGLGQT+VG AVGLHYYV+VFHR VLHQPPKTNWK+HGIYATCFL          
Sbjct: 338 LSSKFLGLGQTLVGYAVGLHYYVAVFHRVVLHQPPKTNWKVHGIYATCFL---------- 387

Query: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVICLLANAERRKKAYLEEGGEEGKK 157
                                          VICL ANAERRKKAYLEEGGEEGKK
Sbjct: 388 -------------------------------VICLFANAERRKKAYLEEGGEEGKK 412


>ref|XP_002310568.1| predicted protein [Populus trichocarpa] gi|222853471|gb|EEE91018.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  180 bits (456), Expect = 3e-43
 Identities = 96/176 (54%), Positives = 108/176 (61%)
 Frame = -1

Query: 684 IYFSILAFASLVTGLEPLKFFYASSQSSYICLQVLQTXXXXXXXXXXXXXXXXXYSTETG 505
           IYF+IL  ++LVTGLEPLKFFYA+SQS+Y+CL V QT                 +S E G
Sbjct: 316 IYFTILCLSALVTGLEPLKFFYATSQSNYVCLMVFQTLGYVLYLLLLLMYLILVFSAECG 375

Query: 504 IGLKVLGLGQTIVGCAVGLHYYVSVFHRAVLHQPPKTNWKIHGIYATCFLXXXXXXXXXX 325
           +G K+LGLGQT+VG A+GLHYYV+VFHR VLHQPPKTNWKIHGIYATCFL          
Sbjct: 376 MGSKLLGLGQTLVGFAIGLHYYVAVFHRVVLHQPPKTNWKIHGIYATCFL---------- 425

Query: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVICLLANAERRKKAYLEEGGEEGKK 157
                                          VICL ANAERRKKAYLEEGGEEGKK
Sbjct: 426 -------------------------------VICLFANAERRKKAYLEEGGEEGKK 450


>ref|XP_002866887.1| hypothetical protein ARALYDRAFT_490769 [Arabidopsis lyrata subsp.
           lyrata] gi|297312723|gb|EFH43146.1| hypothetical protein
           ARALYDRAFT_490769 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  175 bits (443), Expect = 9e-42
 Identities = 93/176 (52%), Positives = 107/176 (60%)
 Frame = -1

Query: 684 IYFSILAFASLVTGLEPLKFFYASSQSSYICLQVLQTXXXXXXXXXXXXXXXXXYSTETG 505
           IYFSIL  +SLVTG+EPLKF YA+S S+Y+CLQ+LQT                 +ST+ G
Sbjct: 314 IYFSILCLSSLVTGIEPLKFLYATSSSTYVCLQILQTLGYVFYLLLLLMYLVLVFSTDCG 373

Query: 504 IGLKVLGLGQTIVGCAVGLHYYVSVFHRAVLHQPPKTNWKIHGIYATCFLXXXXXXXXXX 325
           +GLKVLGL QT VG AVGLHYYV+VFHR VL QPPKTNWKIHG+YATCFL          
Sbjct: 374 LGLKVLGLAQTFVGFAVGLHYYVAVFHRVVLRQPPKTNWKIHGVYATCFL---------- 423

Query: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVICLLANAERRKKAYLEEGGEEGKK 157
                                          +ICLL+NAERRKK YLEEGG+EGKK
Sbjct: 424 -------------------------------LICLLSNAERRKKEYLEEGGDEGKK 448


>ref|NP_195694.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4490735|emb|CAB38897.1| putative protein [Arabidopsis
           thaliana] gi|7271039|emb|CAB80647.1| putative protein
           [Arabidopsis thaliana] gi|18175809|gb|AAL59931.1|
           unknown protein [Arabidopsis thaliana]
           gi|22136848|gb|AAM91768.1| unknown protein [Arabidopsis
           thaliana] gi|332661725|gb|AEE87125.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 451

 Score =  175 bits (443), Expect = 9e-42
 Identities = 93/176 (52%), Positives = 107/176 (60%)
 Frame = -1

Query: 684 IYFSILAFASLVTGLEPLKFFYASSQSSYICLQVLQTXXXXXXXXXXXXXXXXXYSTETG 505
           IYFSIL  +SLVTG+EPLKF YA+S S+Y+CLQ+LQT                 +ST+ G
Sbjct: 316 IYFSILCLSSLVTGIEPLKFLYATSSSTYVCLQILQTLGYVFYLLLLLMYLVLVFSTDCG 375

Query: 504 IGLKVLGLGQTIVGCAVGLHYYVSVFHRAVLHQPPKTNWKIHGIYATCFLXXXXXXXXXX 325
           +GLKVLGL QT VG AVGLHYYV+VFHR VL QPPKTNWKIHG+YATCFL          
Sbjct: 376 LGLKVLGLAQTFVGFAVGLHYYVAVFHRVVLRQPPKTNWKIHGVYATCFL---------- 425

Query: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVICLLANAERRKKAYLEEGGEEGKK 157
                                          +ICLL+NAERRKK YLEEGG+EGKK
Sbjct: 426 -------------------------------LICLLSNAERRKKEYLEEGGDEGKK 450


>ref|XP_002533203.1| conserved hypothetical protein [Ricinus communis]
           gi|223526979|gb|EEF29174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 458

 Score =  172 bits (435), Expect = 7e-41
 Identities = 91/176 (51%), Positives = 107/176 (60%)
 Frame = -1

Query: 684 IYFSILAFASLVTGLEPLKFFYASSQSSYICLQVLQTXXXXXXXXXXXXXXXXXYSTETG 505
           IYFSIL  +SLVTGLEPL+FFYA+S+S+Y+CL VLQT                 +STE+G
Sbjct: 323 IYFSILCLSSLVTGLEPLRFFYATSESTYVCLMVLQTLGYVLYLLLLLMYLILVFSTESG 382

Query: 504 IGLKVLGLGQTIVGCAVGLHYYVSVFHRAVLHQPPKTNWKIHGIYATCFLXXXXXXXXXX 325
           +G ++LGLGQ  VG A+GLH+YVSVFHR VLHQPPKTNWK+H IYATCFL          
Sbjct: 383 LGSRLLGLGQIFVGFAIGLHFYVSVFHRVVLHQPPKTNWKVHAIYATCFL---------- 432

Query: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVICLLANAERRKKAYLEEGGEEGKK 157
                                          VICLLA  +RRKKAYLE+GGEEGKK
Sbjct: 433 -------------------------------VICLLAKFDRRKKAYLEDGGEEGKK 457


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