BLASTX nr result

ID: Cimicifuga21_contig00027859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027859
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273638.1| PREDICTED: casparian strip membrane protein ...   194   2e-47
ref|XP_002276085.1| PREDICTED: casparian strip membrane protein ...   190   4e-46
sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane p...   180   4e-43
sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane p...   180   4e-43
ref|XP_002523839.1| conserved hypothetical protein [Ricinus comm...   175   1e-41

>ref|XP_002273638.1| PREDICTED: casparian strip membrane protein VIT_06s0080g00840
           [Vitis vinifera] gi|226713612|sp|A7QF77.1|CASP1_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_06s0080g00840 gi|296084880|emb|CBI28289.3| unnamed
           protein product [Vitis vinifera]
          Length = 201

 Score =  194 bits (494), Expect = 2e-47
 Identities = 99/153 (64%), Positives = 113/153 (73%)
 Frame = -1

Query: 717 VATTKGTKLRKGRWKKGFSVFDFXXXXXXXXXXXXXXTVMGTTDQTLPLVTQFFQFHASY 538
           VATTK  +  K   K+G ++FDF              T MGTTDQTLP  TQFFQF ASY
Sbjct: 23  VATTKAIQHPKAGLKRGLAIFDFILRLSAIGAALAATTTMGTTDQTLPFFTQFFQFQASY 82

Query: 537 DDLPALTFFVIANAIVSGYLFLSLPFSIVSIVRPHRVGARVLLLILDTVMIALTSSXXXX 358
           DDLPA +FFVIANAI SGYLFLSLPFSIV IVRPH +GAR+LL+I DTVM+ALT +    
Sbjct: 83  DDLPAFSFFVIANAIASGYLFLSLPFSIVCIVRPHAMGARLLLVICDTVMVALTIAAAAA 142

Query: 357 XXAIVYLAHNGSSTANWIAMCQQFDDFCQQISG 259
             AIVYLAHNG+S ANW+A+CQQFDDFCQ +SG
Sbjct: 143 AAAIVYLAHNGNSNANWVAICQQFDDFCQSVSG 175


>ref|XP_002276085.1| PREDICTED: casparian strip membrane protein VIT_08s0007g02880
           [Vitis vinifera] gi|226713603|sp|A7PP95.1|CASP2_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_08s0007g02880 gi|297740155|emb|CBI30337.3| unnamed
           protein product [Vitis vinifera]
          Length = 209

 Score =  190 bits (482), Expect = 4e-46
 Identities = 96/155 (61%), Positives = 110/155 (70%)
 Frame = -1

Query: 723 PIVATTKGTKLRKGRWKKGFSVFDFXXXXXXXXXXXXXXTVMGTTDQTLPLVTQFFQFHA 544
           PIVATTK T      WKKG ++FDF              T MGTTD+TLP  TQFFQF A
Sbjct: 29  PIVATTKATPHPNAGWKKGLAIFDFLLRLAAIAATLAAATTMGTTDETLPFFTQFFQFQA 88

Query: 543 SYDDLPALTFFVIANAIVSGYLFLSLPFSIVSIVRPHRVGARVLLLILDTVMIALTSSXX 364
           S+DDLPA  FFV+A AI SGYL LSLPFS+VSI RPH  G R+LL+I DTVM+ALT++  
Sbjct: 89  SFDDLPAFMFFVVATAIASGYLALSLPFSLVSIFRPHAQGIRLLLIISDTVMLALTTAGA 148

Query: 363 XXXXAIVYLAHNGSSTANWIAMCQQFDDFCQQISG 259
               AIVYLAHNG S+ANWIA+CQQF DFCQ +SG
Sbjct: 149 ASATAIVYLAHNGDSSANWIAICQQFTDFCQSVSG 183


>sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane protein 3
          Length = 207

 Score =  180 bits (456), Expect = 4e-43
 Identities = 89/147 (60%), Positives = 105/147 (71%)
 Frame = -1

Query: 699 TKLRKGRWKKGFSVFDFXXXXXXXXXXXXXXTVMGTTDQTLPLVTQFFQFHASYDDLPAL 520
           T  ++G  K+G ++FDF                MGTTDQTLP  TQFFQF ASYDDLP  
Sbjct: 35  TPHKRGGMKRGVAIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQASYDDLPTF 94

Query: 519 TFFVIANAIVSGYLFLSLPFSIVSIVRPHRVGARVLLLILDTVMIALTSSXXXXXXAIVY 340
           TFFVIANAI SGYL LSLPFSIV+IVRPH  G ++LLLILDTV++A T++      AIVY
Sbjct: 95  TFFVIANAIASGYLVLSLPFSIVAIVRPHVTGVKLLLLILDTVLVAFTTAAAASAAAIVY 154

Query: 339 LAHNGSSTANWIAMCQQFDDFCQQISG 259
           LAHNG+S  NW A+CQQF+DFCQ+ SG
Sbjct: 155 LAHNGNSNTNWFAICQQFNDFCQRTSG 181


>sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane protein 1
          Length = 208

 Score =  180 bits (456), Expect = 4e-43
 Identities = 86/144 (59%), Positives = 102/144 (70%)
 Frame = -1

Query: 690 RKGRWKKGFSVFDFXXXXXXXXXXXXXXTVMGTTDQTLPLVTQFFQFHASYDDLPALTFF 511
           R G W++G S+FDF                MGTTDQTLP  TQFFQF ASYDDLPA TFF
Sbjct: 39  RGGGWRRGVSIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQASYDDLPAFTFF 98

Query: 510 VIANAIVSGYLFLSLPFSIVSIVRPHRVGARVLLLILDTVMIALTSSXXXXXXAIVYLAH 331
           V+AN I SGYL LSLPFSI +IVRPH    ++LL+I DTVM+A T++      AIVYLAH
Sbjct: 99  VVANGIASGYLVLSLPFSIATIVRPHAAAIKLLLIIFDTVMVAFTAAAAAAAAAIVYLAH 158

Query: 330 NGSSTANWIAMCQQFDDFCQQISG 259
           NG+S  NW A+CQQF+DFCQ++SG
Sbjct: 159 NGNSKTNWFAICQQFNDFCQRVSG 182


>ref|XP_002523839.1| conserved hypothetical protein [Ricinus communis]
           gi|238055378|sp|B9SCX0.1|CASP1_RICCO RecName:
           Full=Casparian strip membrane protein RCOM_1282030
           gi|223536927|gb|EEF38565.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 215

 Score =  175 bits (444), Expect = 1e-41
 Identities = 90/156 (57%), Positives = 106/156 (67%), Gaps = 2/156 (1%)
 Frame = -1

Query: 723 PIVATTKGT--KLRKGRWKKGFSVFDFXXXXXXXXXXXXXXTVMGTTDQTLPLVTQFFQF 550
           P+V TT     KL +G WKKG ++FDF               +MGTT+QTLP  TQFFQF
Sbjct: 33  PVVVTTAKAIQKLPRGGWKKGVAIFDFVVRLCAIATGLAATGIMGTTEQTLPFFTQFFQF 92

Query: 549 HASYDDLPALTFFVIANAIVSGYLFLSLPFSIVSIVRPHRVGARVLLLILDTVMIALTSS 370
           HA Y+DLP   FFV AN I SGYL LSLPFSIV IVRP  +  R+LL+I DTV++ALT +
Sbjct: 93  HAEYNDLPTFMFFVFANGIASGYLILSLPFSIVCIVRPLAIVPRLLLIIFDTVVMALTIA 152

Query: 369 XXXXXXAIVYLAHNGSSTANWIAMCQQFDDFCQQIS 262
                 AIVYLAHNG+S ANW A+CQQF+DFCQQ S
Sbjct: 153 AASAAAAIVYLAHNGNSNANWNAICQQFNDFCQQTS 188


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