BLASTX nr result

ID: Cimicifuga21_contig00027838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027838
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm...   147   7e-34
ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_003958958.1| hypothetical protein KAFR_0I00420 [Kazachsta...   125   5e-27
ref|XP_003673236.1| hypothetical protein NCAS_0A02870 [Naumovozy...   122   3e-26
gb|EKE41958.1| DNA repair and recombination protein, putative [E...   121   7e-26

>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
           gi|223540444|gb|EEF42013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 512

 Score =  147 bits (372), Expect = 7e-34
 Identities = 78/155 (50%), Positives = 109/155 (70%), Gaps = 5/155 (3%)
 Frame = -3

Query: 457 QTIHSFAGVRLRLGDDKELLLKSVLKNKPALMRWKKVKALVIDEVSMISAQDFNNLEFIA 278
           QT+HSFAG  +  GD K LL + V++N  A  RW +VK LV+DE+SMI    F+ LEFIA
Sbjct: 103 QTLHSFAGFGIGDGDPKALL-ERVVRNSRACKRWNQVKVLVVDEISMIGGNTFDTLEFIA 161

Query: 277 SKIKEMDSNHFGVWGGIQLVVSGDFFQLPPISEE-----EEFAFESHCWHDSFYLQVELT 113
            +I+  ++    VWGGIQL+VSGDFFQLP + ++     +EFAFE+ CW+ SF+ QVE+T
Sbjct: 162 RQIRGSNN----VWGGIQLIVSGDFFQLPLVLKKSNPSGKEFAFEADCWNRSFHAQVEIT 217

Query: 112 EIFRQQSDAQFIDLLQATRRGQINESHIQILLQCC 8
           ++FR Q+D Q I+LLQ  R+G I+   +++L QCC
Sbjct: 218 KVFR-QTDPQLINLLQGIRKGVIDTEDLKLLEQCC 251


>ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|222840828|gb|EEE78375.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  145 bits (365), Expect = 4e-33
 Identities = 80/155 (51%), Positives = 106/155 (68%), Gaps = 5/155 (3%)
 Frame = -3

Query: 457 QTIHSFAGVRLRLGDDKELLLKSVLKNKPALMRWKKVKALVIDEVSMISAQDFNNLEFIA 278
           QT+HSFA + ++  D   LL K V  NK A  RWKK KALVIDE+SMISA  F +LE+IA
Sbjct: 118 QTLHSFASIGIQNADSGTLLDK-VKMNKHACKRWKKAKALVIDEISMISADLFESLEYIA 176

Query: 277 SKIKEMDSNHFGVWGGIQLVVSGDFFQLPPISEEE-----EFAFESHCWHDSFYLQVELT 113
             I+  +     VWGGIQL+V GDFFQLPP+ +++     EFAFE+ CW+ SF LQVELT
Sbjct: 177 RDIRGSEV----VWGGIQLIVCGDFFQLPPVIKQQKLSGKEFAFEADCWNASFDLQVELT 232

Query: 112 EIFRQQSDAQFIDLLQATRRGQINESHIQILLQCC 8
           ++FR QSD + I +LQ  R+G+ +   +Q+L + C
Sbjct: 233 QVFR-QSDPRLIKMLQGIRKGETDAEDLQLLEESC 266


>ref|XP_003958958.1| hypothetical protein KAFR_0I00420 [Kazachstania africana CBS 2517]
           gi|372465548|emb|CCF59823.1| hypothetical protein
           KAFR_0I00420 [Kazachstania africana CBS 2517]
          Length = 823

 Score =  125 bits (313), Expect = 5e-27
 Identities = 67/143 (46%), Positives = 95/143 (66%), Gaps = 4/143 (2%)
 Frame = -3

Query: 454 TIHSFAGVRLRLGDDKELLLKSVLKNKPALMRWKKVKALVIDEVSMISAQDFNNLEFIAS 275
           TIHSF+GV L  GD  + L K V +++  L RW+ + ALV+DE+SMI A+  + L++IA 
Sbjct: 286 TIHSFSGVGLAKGD-ADRLYKKVRRSRKHLKRWENISALVVDEISMIDAELLDKLDYIAQ 344

Query: 274 KIKEMDSNHFGVWGGIQLVVSGDFFQLPPISEEEE----FAFESHCWHDSFYLQVELTEI 107
           +I++   NH   +GGIQL++ GDFFQLPP+S++ E    FAFES  W     L + L  +
Sbjct: 345 RIRK---NH-SPFGGIQLILCGDFFQLPPVSKDPENPTKFAFESKAWKTGIQLTIMLQRV 400

Query: 106 FRQQSDAQFIDLLQATRRGQINE 38
           FRQQ D +FI++L   R GQI+E
Sbjct: 401 FRQQGDTKFIEMLNKMRLGQIDE 423


>ref|XP_003673236.1| hypothetical protein NCAS_0A02870 [Naumovozyma castellii CBS 4309]
           gi|342299099|emb|CCC66845.1| hypothetical protein
           NCAS_0A02870 [Naumovozyma castellii CBS 4309]
          Length = 870

 Score =  122 bits (306), Expect = 3e-26
 Identities = 66/143 (46%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
 Frame = -3

Query: 454 TIHSFAGVRLRLGDDKELLLKSVLKNKPALMRWKKVKALVIDEVSMISAQDFNNLEFIAS 275
           T+HSF+G+ L  GD  +L  K V ++K    RW  +KALVIDE+SM+     + L+FIA 
Sbjct: 343 TVHSFSGIGLGKGDANQLF-KKVRRSKKHSKRWATIKALVIDEISMLDGHLLDKLDFIAK 401

Query: 274 KIKEMDSNHFGVWGGIQLVVSGDFFQLPPISEEEE----FAFESHCWHDSFYLQVELTEI 107
           KI++   NH G +GGIQLV  GDFFQLPP+S++ +    FAFES+ W       + L ++
Sbjct: 402 KIRK---NH-GPFGGIQLVFCGDFFQLPPVSKDPQNPTVFAFESNAWKTGIQTTIMLQKV 457

Query: 106 FRQQSDAQFIDLLQATRRGQINE 38
           FRQQ D +FID+L   R G+I++
Sbjct: 458 FRQQGDIKFIDMLNKMRLGKIDD 480


>gb|EKE41958.1| DNA repair and recombination protein, putative [Entamoeba nuttalli
           P19]
          Length = 841

 Score =  121 bits (303), Expect = 7e-26
 Identities = 71/153 (46%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
 Frame = -3

Query: 454 TIHSFAGVRLRLGDDKELLLKSVLKNKPALMRWKKVKALVIDEVSMISAQDFNNLEFIAS 275
           TIHSF+G+    G   EL  K V ++K AL +W KV+ L+IDE+SMI    F+ LEFIA 
Sbjct: 141 TIHSFSGIGKGEGSSSELWDK-VKRDKKALKKWNKVEVLIIDEISMIDGDLFDKLEFIAR 199

Query: 274 KIKEMDSNHFGVWGGIQLVVSGDFFQLPPISEE--EEFAFESHCWHDSFYLQVELTEIFR 101
           K +    N+   +GGIQ+++ GDF QLPPIS     +FAFES+CW+        LT + R
Sbjct: 200 KAR----NNNLAFGGIQMIICGDFCQLPPISRNGTTKFAFESNCWNKVIPYCYYLTTVHR 255

Query: 100 QQSDAQFIDLLQATRRGQINESHIQILLQCCDK 2
            Q+D +FI LL   R G+IN+  I  L  CCDK
Sbjct: 256 -QNDQKFITLLNGIRIGEINDEMINCLKGCCDK 287


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