BLASTX nr result

ID: Cimicifuga21_contig00027834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027834
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513917.1| Ribosome-binding protein, putative [Ricinus ...   124   3e-26
gb|AFP73614.1| synaptonemal complex protein ZYP1 [Hordeum vulgar...   123   6e-26
gb|AFD04131.1| molecular zipper 1-like protein ZYP1, partial [Tr...   121   3e-25
ref|XP_003634472.1| PREDICTED: synaptonemal complex protein 2-li...   115   2e-23
emb|CBI19158.3| unnamed protein product [Vitis vinifera]              115   2e-23

>ref|XP_002513917.1| Ribosome-binding protein, putative [Ricinus communis]
           gi|223547003|gb|EEF48500.1| Ribosome-binding protein,
           putative [Ricinus communis]
          Length = 868

 Score =  124 bits (312), Expect = 3e-26
 Identities = 82/226 (36%), Positives = 117/226 (51%), Gaps = 33/226 (14%)
 Frame = +3

Query: 3   LIKALEGAIAREKLRLESLTSCLEKLQQGLHLNEDICQQLKVTQENLEKEKQALQCSKSS 182
           ++K  E  +A  +L  ESL S L+++   L + ED  + L  TQE LEKEK  LQ S ++
Sbjct: 216 MLKKFEATLAANRLDTESLNSKLDEMHHELGIKEDNIKCLMTTQEKLEKEKSDLQFSSNN 275

Query: 183 ---------------------------ELDKNSLAFSGHVAQLNSVFDIWYKLAQQEKDL 281
                                      ELDK +L F+    QLNS+ D  +KL Q E+DL
Sbjct: 276 FADKLAMSLQEIKDLEGFVHILAAQMAELDKQNLVFNDKFDQLNSLCDTCFKLIQLERDL 335

Query: 282 IVKHAQCQFDELRGRFLHVASDNGVLRSDIEELNTWITKLQKGEEGIMVQHAEECHLTKQ 461
           I KHAQ +F++L  +FL VAS+   L+   +ELN  I +LQK ++ I  Q +E C L   
Sbjct: 336 IAKHAQKKFNQLHDKFLCVASEKDALQLVNQELNDKIIELQKAQDSIREQLSEGCRLAAD 395

Query: 462 KIRSLESEAKSLGSKKHE------DIERQLEDQRNECVPDENDQED 581
           +I+ LESEA+ L SKK+E       +E  ++  R      EN  +D
Sbjct: 396 RIQKLESEAEMLLSKKNETEILVSKLEETIDSLREHLSTSENKMQD 441


>gb|AFP73614.1| synaptonemal complex protein ZYP1 [Hordeum vulgare subsp. vulgare]
          Length = 863

 Score =  123 bits (309), Expect = 6e-26
 Identities = 82/240 (34%), Positives = 128/240 (53%), Gaps = 32/240 (13%)
 Frame = +3

Query: 3   LIKALEGAIAREKLRLESLTSCLEKLQQGLHLNEDICQQLKVTQENLEKEKQALQC---- 170
           LIK LEG++   K RL    S L+ ++Q L L +D+C  LK    + EKEK  L+     
Sbjct: 216 LIKQLEGSVEENKSRLLCADSRLQCMEQELKLKQDVCICLKENLASAEKEKNDLELRNQR 275

Query: 171 -----------------------SKSSELDKNSLAFSGHVAQLNSVFDIWYKLAQQEKDL 281
                                  +K +ELDK   + S HVA+L S FD +Y + Q+EK L
Sbjct: 276 YSLEVERLYKDNKDANELLSSFVAKVAELDKEHASMSSHVARLLSSFDKYYGMVQEEKLL 335

Query: 282 IVKHAQCQFDELRGRFLHVASDNGVLRSDIEELNTWITKLQKGEEGIMVQHAEECHLTKQ 461
           I + A+ + + L+ +F+ + S+N  L+ +I EL + IT+LQK +E +MVQH E+CH+ + 
Sbjct: 336 ITRSAKDKLEHLQNQFVDLTSENSGLKIEIGELKSRITELQKTQEVVMVQHVEKCHVAED 395

Query: 462 KIRSLESEAKSLGS--KKHEDIERQLEDQRNECVPDEN---DQEDEGNAGHSTASEDNQE 626
           KIR LESEA+   S   + E +  +L+ +  + + D +   +Q++E          DNQE
Sbjct: 396 KIRRLESEAEISASNVNRLESLSSELQGRVQKLLEDSSLAENQKEELLQKTLKLESDNQE 455


>gb|AFD04131.1| molecular zipper 1-like protein ZYP1, partial [Triticum aestivum]
          Length = 863

 Score =  121 bits (303), Expect = 3e-25
 Identities = 82/240 (34%), Positives = 126/240 (52%), Gaps = 32/240 (13%)
 Frame = +3

Query: 3   LIKALEGAIAREKLRLESLTSCLEKLQQGLHLNEDICQQLKVTQENLEKEKQALQC---- 170
           LIK LEG++   K RL    S L+ ++Q L L +D+C  LK      EKEK  L+     
Sbjct: 216 LIKQLEGSVEENKSRLLCADSRLQCIEQELKLKQDVCIYLKENLACAEKEKNDLELRNQR 275

Query: 171 -----------------------SKSSELDKNSLAFSGHVAQLNSVFDIWYKLAQQEKDL 281
                                  +K +ELDK   + S  VA+L S FD +Y + Q+EK L
Sbjct: 276 YSLEVERLYKDNKDANELLSSFVAKVAELDKEHASMSSRVARLLSSFDKYYGMVQEEKLL 335

Query: 282 IVKHAQCQFDELRGRFLHVASDNGVLRSDIEELNTWITKLQKGEEGIMVQHAEECHLTKQ 461
           I + A+ + + L+ +F+ + S+N  L+S+I EL + IT+LQK +E +MVQH EEC + + 
Sbjct: 336 ITRSAKDKLEHLQNQFVDLTSENSGLKSEIGELKSRITELQKTQEAVMVQHVEECQVAED 395

Query: 462 KIRSLESEAKSLGSKKH--EDIERQLEDQRNECVPDEN---DQEDEGNAGHSTASEDNQE 626
           KIR LESEA+   S  +  E +  +L+ +  + + D +   +Q++E          DNQE
Sbjct: 396 KIRRLESEAEISASNVNCLEKLSSELQGRVQKLLEDSSLAENQKEELLQKTLKLESDNQE 455


>ref|XP_003634472.1| PREDICTED: synaptonemal complex protein 2-like [Vitis vinifera]
          Length = 868

 Score =  115 bits (288), Expect = 2e-23
 Identities = 80/226 (35%), Positives = 112/226 (49%), Gaps = 33/226 (14%)
 Frame = +3

Query: 3   LIKALEGAIAREKLRLESLTSCLEKLQQGLHLNEDICQQLKVTQENLEKEKQALQCS--- 173
           +IK  E  +A  +L  ESL S LE++   L L ED  + L  +QENLEKEK  LQ S   
Sbjct: 216 MIKQFEATVAASRLATESLNSKLEEVHIELRLKEDEFKHLIASQENLEKEKSHLQLSNDD 275

Query: 174 ------------------------KSSELDKNSLAFSGHVAQLNSVFDIWYKLAQQEKDL 281
                                   K  +LDK SL FS    QLN +   + KLAQQE+DL
Sbjct: 276 FAKRLALSLHERKIIEDLVQKWSVKLIDLDKQSLNFSDKFDQLNHMNCSYVKLAQQERDL 335

Query: 282 IVKHAQCQFDELRGRFLHVASDNGVLRSDIEELNTWITKLQKGEEGIMVQHAEECHLTKQ 461
             KH+Q Q+ +L   FL +AS+   L+   + LN  + +LQ+    +  Q AEEC L  +
Sbjct: 336 AAKHSQQQYAQLHRTFLCIASEKDALQLKNQVLNNKVVELQEAHNFVTAQLAEECRLAGE 395

Query: 462 KIRSLESEAKSLGSKKHE------DIERQLEDQRNECVPDENDQED 581
           KI++LESE ++L S+K +       +E  +  Q       EN  +D
Sbjct: 396 KIQTLESEVENLVSRKIDKEMLVTKLEEIINTQSESLKSSENKMKD 441


>emb|CBI19158.3| unnamed protein product [Vitis vinifera]
          Length = 876

 Score =  115 bits (288), Expect = 2e-23
 Identities = 80/226 (35%), Positives = 112/226 (49%), Gaps = 33/226 (14%)
 Frame = +3

Query: 3   LIKALEGAIAREKLRLESLTSCLEKLQQGLHLNEDICQQLKVTQENLEKEKQALQCS--- 173
           +IK  E  +A  +L  ESL S LE++   L L ED  + L  +QENLEKEK  LQ S   
Sbjct: 216 MIKQFEATVAASRLATESLNSKLEEVHIELRLKEDEFKHLIASQENLEKEKSHLQLSNDD 275

Query: 174 ------------------------KSSELDKNSLAFSGHVAQLNSVFDIWYKLAQQEKDL 281
                                   K  +LDK SL FS    QLN +   + KLAQQE+DL
Sbjct: 276 FAKRLALSLHERKIIEDLVQKWSVKLIDLDKQSLNFSDKFDQLNHMNCSYVKLAQQERDL 335

Query: 282 IVKHAQCQFDELRGRFLHVASDNGVLRSDIEELNTWITKLQKGEEGIMVQHAEECHLTKQ 461
             KH+Q Q+ +L   FL +AS+   L+   + LN  + +LQ+    +  Q AEEC L  +
Sbjct: 336 AAKHSQQQYAQLHRTFLCIASEKDALQLKNQVLNNKVVELQEAHNFVTAQLAEECRLAGE 395

Query: 462 KIRSLESEAKSLGSKKHE------DIERQLEDQRNECVPDENDQED 581
           KI++LESE ++L S+K +       +E  +  Q       EN  +D
Sbjct: 396 KIQTLESEVENLVSRKIDKEMLVTKLEEIINTQSESLKSSENKMKD 441


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