BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027786
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319950.1| predicted protein [Populus trichocarpa] gi|2...   278   5e-73
ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi...   277   1e-72
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi...   257   1e-66
ref|XP_002522705.1| pentatricopeptide repeat-containing protein,...   252   4e-65
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th...   246   3e-63

>ref|XP_002319950.1| predicted protein [Populus trichocarpa] gi|222858326|gb|EEE95873.1|
           predicted protein [Populus trichocarpa]
          Length = 746

 Score =  278 bits (711), Expect = 5e-73
 Identities = 137/202 (67%), Positives = 161/202 (79%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           Y+RMQV  VSPD F+ P VLKACS +  +  GR VHGQI+RHGFESDVFVQNGLVALYAK
Sbjct: 161 YARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAK 220

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSV 361
           CGEI  A AVF  L DRT+VSWTSIISGYAQNGQP++ALRI SEMR ++ +PDWIALVSV
Sbjct: 221 CGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSV 280

Query: 362 LRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEMPNV 541
           LRAY+DVEDLE GK++HG VIK             T++YAK G V+VA+L F+++E P++
Sbjct: 281 LRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSL 340

Query: 542 ILWNAMISGYAKNGYADEAIEL 607
           I WNAMISGY KNGYA+EAIEL
Sbjct: 341 IFWNAMISGYVKNGYAEEAIEL 362



 Score =  111 bits (277), Expect = 1e-22
 Identities = 58/202 (28%), Positives = 109/202 (53%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           +S M+   V PD   L  VL+A + V  +  G+++HG + + G E +  +   L +LYAK
Sbjct: 262 FSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAK 321

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSV 361
           CG +  A+  F+ + + +++ W ++ISGY +NG   +A+ +   M++ + +PD I + S 
Sbjct: 322 CGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSS 381

Query: 362 LRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEMPNV 541
           + A + +  LE  + +  ++                  YAK G V +A+ +FD++   +V
Sbjct: 382 IAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDV 441

Query: 542 ILWNAMISGYAKNGYADEAIEL 607
           ++W+AM+ GY  +G   E+I L
Sbjct: 442 VVWSAMMVGYGLHGQGRESIIL 463



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/168 (27%), Positives = 86/168 (51%)
 Frame = +2

Query: 104 VHGQIYRHGFESDVFVQNGLVALYAKCGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQ 283
           ++ ++   G +   F+   LV   +  GE+  A+ +FD   D  V  W +I+  Y+++G 
Sbjct: 94  IYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGF 153

Query: 284 PLKALRISSEMRNSSTKPDWIALVSVLRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXX 463
              A+ + + M+ +   PD  +   VL+A S +  LE G+ VHG + +            
Sbjct: 154 FGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNG 213

Query: 464 XTAMYAKSGEVLVAKLLFDKMEMPNVILWNAMISGYAKNGYADEAIEL 607
             A+YAK GE++ A  +F ++    ++ W ++ISGYA+NG   EA+ +
Sbjct: 214 LVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRI 261



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/130 (29%), Positives = 69/130 (53%)
 Frame = +2

Query: 11  MQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAKCGE 190
           M+ + + PD  T+   + AC+ +  +   R +   I    F +DV V   L+  YAKCG 
Sbjct: 366 MKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGS 425

Query: 191 IKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSVLRA 370
           +  A+ VFD + D+ VV W++++ GY  +GQ  +++ +   MR +   P+ +  V +L A
Sbjct: 426 VDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTA 485

Query: 371 YSDVEDLEQG 400
             +   +E+G
Sbjct: 486 CKNSGLVEEG 495


>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
           protein product [Vitis vinifera]
          Length = 742

 Score =  277 bits (708), Expect = 1e-72
 Identities = 134/202 (66%), Positives = 161/202 (79%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           YSRMQ  GV+PD FTLP VLKACSGV  +  G+ VHGQI+R GFESDVFVQNGLVALYAK
Sbjct: 157 YSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAK 216

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSV 361
           CG ++ A+ VF+GL DR +VSWTS+ISGY QNG P++ALRI  +MR  + KPDWIALVSV
Sbjct: 217 CGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSV 276

Query: 362 LRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEMPNV 541
           LRAY+DVEDLEQGK++HG V+K             TAMYAK G+V+VA+  FD+ME+PNV
Sbjct: 277 LRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNV 336

Query: 542 ILWNAMISGYAKNGYADEAIEL 607
           ++WNAMISGYAKNGY +EA+ L
Sbjct: 337 MMWNAMISGYAKNGYTNEAVGL 358



 Score =  115 bits (288), Expect = 6e-24
 Identities = 63/202 (31%), Positives = 112/202 (55%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           + +M+   V PD   L  VL+A + V  + +G+++HG + + G E +  +   L A+YAK
Sbjct: 258 FGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAK 317

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSV 361
           CG++  A++ FD +    V+ W ++ISGYA+NG   +A+ +  EM + + + D I + S 
Sbjct: 318 CGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSA 377

Query: 362 LRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEMPNV 541
           + A + V  L+  K +  ++ K               M+AK G V +A+ +FD+    +V
Sbjct: 378 ILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDV 437

Query: 542 ILWNAMISGYAKNGYADEAIEL 607
           ++W+AMI GY  +G   +AI+L
Sbjct: 438 VVWSAMIVGYGLHGRGQDAIDL 459



 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 56/168 (33%), Positives = 84/168 (50%)
 Frame = +2

Query: 104 VHGQIYRHGFESDVFVQNGLVALYAKCGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQ 283
           +H Q+   G     F+    V      GEI  A+ VFD   + +V  W +II GY+ +  
Sbjct: 90  IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNF 149

Query: 284 PLKALRISSEMRNSSTKPDWIALVSVLRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXX 463
              A+ + S M+ S   PD   L  VL+A S V  LE GK VHG + +            
Sbjct: 150 FGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNG 209

Query: 464 XTAMYAKSGEVLVAKLLFDKMEMPNVILWNAMISGYAKNGYADEAIEL 607
             A+YAK G V  A+++F+ ++  N++ W +MISGY +NG   EA+ +
Sbjct: 210 LVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRI 257



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 36/133 (27%), Positives = 69/133 (51%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           +  M  + +  D  T+   + AC+ V  +   + +   I +  + +DVFV   L+ ++AK
Sbjct: 359 FQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAK 418

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSV 361
           CG +  A+ VFD   D+ VV W+++I GY  +G+   A+ +   M+ +   P+ +  V +
Sbjct: 419 CGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGL 478

Query: 362 LRAYSDVEDLEQG 400
           L A +    +E+G
Sbjct: 479 LTACNHSGLVEEG 491


>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  257 bits (656), Expect = 1e-66
 Identities = 127/202 (62%), Positives = 153/202 (75%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           Y  M+  GV PD FT PYVLKAC+ +        +HGQI ++GF SDVFVQNGLVALYAK
Sbjct: 142 YRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAK 201

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSV 361
           CG I  A+ VFDGLY RT+VSWTSIISGYAQNG+ ++ALR+ S+MRN+  KPDWIALVS+
Sbjct: 202 CGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSI 261

Query: 362 LRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEMPNV 541
           LRAY+DV+DLEQG+++HGFVIK             TA YAK G V VAK  FD+M+  NV
Sbjct: 262 LRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNV 321

Query: 542 ILWNAMISGYAKNGYADEAIEL 607
           I+WNAMISGYAKNG+A+EA+ L
Sbjct: 322 IMWNAMISGYAKNGHAEEAVNL 343



 Score =  124 bits (311), Expect = 1e-26
 Identities = 68/202 (33%), Positives = 110/202 (54%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           +S+M+  GV PD   L  +L+A + V  + +GR++HG + + G E +  +   L A YAK
Sbjct: 243 FSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAK 302

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSV 361
           CG +  A++ FD +    V+ W ++ISGYA+NG   +A+ +   M + + KPD + + S 
Sbjct: 303 CGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSA 362

Query: 362 LRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEMPNV 541
           + A + V  LE  + +  +V K               MYAK G V  A+ +FD+    +V
Sbjct: 363 VLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDV 422

Query: 542 ILWNAMISGYAKNGYADEAIEL 607
           ++W+AMI GY  +G   EAI L
Sbjct: 423 VMWSAMIMGYGLHGQGWEAINL 444



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 49/168 (29%), Positives = 83/168 (49%)
 Frame = +2

Query: 104 VHGQIYRHGFESDVFVQNGLVALYAKCGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQ 283
           +H ++   G + + F+   LV   +  G+I  A+ +FD      V  W +II  Y++N  
Sbjct: 75  IHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNM 134

Query: 284 PLKALRISSEMRNSSTKPDWIALVSVLRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXX 463
               + +   MR +   PD      VL+A +++ D      +HG +IK            
Sbjct: 135 YRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNG 194

Query: 464 XTAMYAKSGEVLVAKLLFDKMEMPNVILWNAMISGYAKNGYADEAIEL 607
             A+YAK G + VAK++FD +    ++ W ++ISGYA+NG A EA+ +
Sbjct: 195 LVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRM 242



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 1/181 (0%)
 Frame = +2

Query: 26  VSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAKCGEIKNAQ 205
           + PD  T+   + A + V  +   + +   + +  + SD+FV   L+ +YAKCG ++ A+
Sbjct: 352 IKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFAR 411

Query: 206 AVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSVLRAYSDVE 385
            VFD   D+ VV W+++I GY  +GQ  +A+ +   M+ +   P+ +  + +L A +   
Sbjct: 412 RVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSG 471

Query: 386 DLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEM-PNVILWNAMI 562
            +++G  +   +                 +  ++G +  A     K+ + P V +W A++
Sbjct: 472 LVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALL 531

Query: 563 S 565
           S
Sbjct: 532 S 532


>ref|XP_002522705.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538055|gb|EEF39667.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 501

 Score =  252 bits (643), Expect = 4e-65
 Identities = 126/203 (62%), Positives = 155/203 (76%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSG-VSGVARGRAVHGQIYRHGFESDVFVQNGLVALYA 178
           Y+RMQ+  + PD FT P VLKAC+  ++ +  GR VHGQ +RHG E+DVFVQNGLV  YA
Sbjct: 132 YARMQIACIRPDGFTFPLVLKACTASLAFLDIGRRVHGQAFRHGLEADVFVQNGLVTFYA 191

Query: 179 KCGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVS 358
           KC +I  A  VF  L DR++VSWTSIISGYAQNGQP++ALRI ++MR  + KPD IALVS
Sbjct: 192 KCRKISLANIVFGRLSDRSIVSWTSIISGYAQNGQPIEALRIFNQMREVNVKPDQIALVS 251

Query: 359 VLRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEMPN 538
           VLRAY+DVEDLE GK++HG VIK             TAMYAK G+V+ A+L FD++ +PN
Sbjct: 252 VLRAYTDVEDLEHGKSIHGCVIKMGLEFEIDLLISLTAMYAKCGQVMFARLFFDQVRIPN 311

Query: 539 VILWNAMISGYAKNGYADEAIEL 607
           +ILWNAMISGYAKNGYA+EA+EL
Sbjct: 312 LILWNAMISGYAKNGYAEEALEL 334



 Score =  115 bits (287), Expect = 8e-24
 Identities = 61/202 (30%), Positives = 111/202 (54%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           +++M+   V PD+  L  VL+A + V  +  G+++HG + + G E ++ +   L A+YAK
Sbjct: 234 FNQMREVNVKPDQIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLEFEIDLLISLTAMYAK 293

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSV 361
           CG++  A+  FD +    ++ W ++ISGYA+NG   +AL +   M   +  PD I + SV
Sbjct: 294 CGQVMFARLFFDQVRIPNLILWNAMISGYAKNGYAEEALELFRRMITMNFGPDSITITSV 353

Query: 362 LRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEMPNV 541
           + A + +  LE  + +  ++ +               M++K G V +A+ +FD+    +V
Sbjct: 354 ILACAQMGSLELARWMSDYIGRSEFRNDAFVSSALIDMFSKCGSVDLARDVFDRALDKDV 413

Query: 542 ILWNAMISGYAKNGYADEAIEL 607
           +LW++MI GY  +G   E+I L
Sbjct: 414 VLWSSMIMGYGLHGRGQESINL 435



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
 Frame = +2

Query: 104 VHGQIYRHGFESDVFVQNGLVALYAKCGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQ 283
           +H Q++    + + F+   LV   A  GEI+ A+ VFD   D  V  W +II  Y +   
Sbjct: 65  IHAQLFVSRLQYNGFLITKLVNCCATLGEIRYARNVFDYYPDPDVFLWNAIIRCYTRQNL 124

Query: 284 PLKALRISSEMRNSSTKPDWIALVSVLRA-YSDVEDLEQGKTVHGFVIKXXXXXXXXXXX 460
              A+ + + M+ +  +PD      VL+A  + +  L+ G+ VHG   +           
Sbjct: 125 FCNAIEMYARMQIACIRPDGFTFPLVLKACTASLAFLDIGRRVHGQAFRHGLEADVFVQN 184

Query: 461 XXTAMYAKSGEVLVAKLLFDKMEMPNVILWNAMISGYAKNGYADEAIEL 607
                YAK  ++ +A ++F ++   +++ W ++ISGYA+NG   EA+ +
Sbjct: 185 GLVTFYAKCRKISLANIVFGRLSDRSIVSWTSIISGYAQNGQPIEALRI 233



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/108 (31%), Positives = 59/108 (54%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           + RM      PD  T+  V+ AC+ +  +   R +   I R  F +D FV + L+ +++K
Sbjct: 335 FRRMITMNFGPDSITITSVILACAQMGSLELARWMSDYIGRSEFRNDAFVSSALIDMFSK 394

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNS 325
           CG +  A+ VFD   D+ VV W+S+I GY  +G+  +++ +   MR +
Sbjct: 395 CGSVDLARDVFDRALDKDVVLWSSMIMGYGLHGRGQESINLFEAMRQA 442


>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
           gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332641723|gb|AEE75244.1| mitochondrial editing factor
           22 [Arabidopsis thaliana]
          Length = 694

 Score =  246 bits (627), Expect = 3e-63
 Identities = 117/204 (57%), Positives = 155/204 (75%), Gaps = 2/204 (0%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           YS MQ+  VSPD FT P++LKACSG+S +  GR VH Q++R GF++DVFVQNGL+ALYAK
Sbjct: 107 YSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK 166

Query: 182 CGEIKNAQAVFDGLY--DRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALV 355
           C  + +A+ VF+GL   +RT+VSWT+I+S YAQNG+P++AL I S+MR    KPDW+ALV
Sbjct: 167 CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALV 226

Query: 356 SVLRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEMP 535
           SVL A++ ++DL+QG+++H  V+K               MYAK G+V  AK+LFDKM+ P
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286

Query: 536 NVILWNAMISGYAKNGYADEAIEL 607
           N+ILWNAMISGYAKNGYA EAI++
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDM 310



 Score =  125 bits (314), Expect = 6e-27
 Identities = 67/202 (33%), Positives = 114/202 (56%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           +S+M+   V PD   L  VL A + +  + +GR++H  + + G E +  +   L  +YAK
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSV 361
           CG++  A+ +FD +    ++ W ++ISGYA+NG   +A+ +  EM N   +PD I++ S 
Sbjct: 270 CGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSA 329

Query: 362 LRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEMPNV 541
           + A + V  LEQ ++++ +V +               M+AK G V  A+L+FD+    +V
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389

Query: 542 ILWNAMISGYAKNGYADEAIEL 607
           ++W+AMI GY  +G A EAI L
Sbjct: 390 VVWSAMIVGYGLHGRAREAISL 411



 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
 Frame = +2

Query: 89  ARGRAVHGQIYRHGFESDVFVQNGLVALYAKCGEIKNAQAVFDGLYDRTVVSWTSIISGY 268
           A+ + +H ++   G +   F+   L+   +  G+I  A+ VFD L    +  W +II GY
Sbjct: 35  AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94

Query: 269 AQNGQPLKALRISSEMRNSSTKPDWIALVSVLRAYSDVEDLEQGKTVHGFVIKXXXXXXX 448
           ++N     AL + S M+ +   PD      +L+A S +  L+ G+ VH  V +       
Sbjct: 95  SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154

Query: 449 XXXXXXTAMYAKSGEVLVAKLLFDKMEMP--NVILWNAMISGYAKNGYADEAIEL 607
                  A+YAK   +  A+ +F+ + +P   ++ W A++S YA+NG   EA+E+
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 45/198 (22%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
 Frame = +2

Query: 2   YSRMQVEGVSPDRFTLPYVLKACSGVSGVARGRAVHGQIYRHGFESDVFVQNGLVALYAK 181
           +  M  + V PD  ++   + AC+ V  + + R+++  + R  +  DVF+ + L+ ++AK
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370

Query: 182 CGEIKNAQAVFDGLYDRTVVSWTSIISGYAQNGQPLKALRISSEMRNSSTKPDWIALVSV 361
           CG ++ A+ VFD   DR VV W+++I GY  +G+  +A+ +   M      P+ +  + +
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430

Query: 362 LRAYSDVEDLEQGKTVHGFVIKXXXXXXXXXXXXXTAMYAKSGEVLVAKLLFDKMEM-PN 538
           L A +    + +G      +                 +  ++G +  A  +   M + P 
Sbjct: 431 LMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490

Query: 539 VILWNAMISGYAKNGYAD 592
           V +W A++S   K+ + +
Sbjct: 491 VTVWGALLSACKKHRHVE 508