BLASTX nr result

ID: Cimicifuga21_contig00027770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027770
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]    55   7e-15
ref|XP_002270154.1| PREDICTED: uncharacterized protein LOC100264...    56   1e-14
gb|ABA94365.1| retrotransposon protein, putative, unclassified [...    57   6e-14
ref|XP_002449547.1| hypothetical protein SORBIDRAFT_05g018930 [S...    59   6e-14
ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 ...    60   7e-14

>emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]
          Length = 1556

 Score = 55.5 bits (132), Expect(2) = 7e-15
 Identities = 23/46 (50%), Positives = 33/46 (71%)
 Frame = -2

Query: 271  NLISWTAKIQSTVSRSSAKFEYGSLAHLCAETMWIVHLLREFHVPV 134
            N+ISW AK Q T+SRSS + EY ++AH  AE  W+  +L +FH+P+
Sbjct: 1384 NIISWCAKKQHTISRSSTEAEYRAMAHTTAELTWMSFILNDFHIPL 1429



 Score = 49.7 bits (117), Expect(2) = 7e-15
 Identities = 20/39 (51%), Positives = 29/39 (74%)
 Frame = -1

Query: 119  TLYHDNLNTTYMASHPFLHAGTKHVELDHYFIRECVTFG 3
            TLY+DN +  +MA +P  HA +KH+ELD++F+RE V  G
Sbjct: 1434 TLYYDNTSALHMAINPVFHARSKHIELDYHFVRERVALG 1472


>ref|XP_002270154.1| PREDICTED: uncharacterized protein LOC100264911 [Vitis vinifera]
          Length = 1946

 Score = 56.2 bits (134), Expect(2) = 1e-14
 Identities = 25/46 (54%), Positives = 32/46 (69%)
 Frame = -2

Query: 271 NLISWTAKIQSTVSRSSAKFEYGSLAHLCAETMWIVHLLREFHVPV 134
           NLISW AK Q T+SRSS K EY ++AH  AE  W+  +L + HVP+
Sbjct: 845 NLISWCAKKQHTISRSSTKAEYRAMAHTAAELTWMSFILNDLHVPL 890



 Score = 48.1 bits (113), Expect(2) = 1e-14
 Identities = 19/39 (48%), Positives = 28/39 (71%)
 Frame = -1

Query: 119  TLYHDNLNTTYMASHPFLHAGTKHVELDHYFIRECVTFG 3
            TLY+DN +  +M  +P  HA +KH+ELD++F+RE V  G
Sbjct: 895  TLYYDNTSALHMTINPVFHARSKHIELDYHFVRERVALG 933


>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1064

 Score = 57.0 bits (136), Expect(2) = 6e-14
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = -2

Query: 271  NLISWTAKIQSTVSRSSAKFEYGSLAHLCAETMWIVHLLREFHVPV 134
            NL+SW++K Q+TVSRSSA+ EY ++AH  AE  W+  LL E H+P+
Sbjct: 929  NLVSWSSKRQTTVSRSSAEAEYRAVAHAVAECCWLRQLLLELHIPL 974



 Score = 45.1 bits (105), Expect(2) = 6e-14
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = -1

Query: 119  TLYHDNLNTTYMASHPFLHAGTKHVELDHYFIRECVTFG 3
            T+Y DN++  YM ++P  H  TKH+E+D +F+RE V  G
Sbjct: 979  TVYCDNVSAVYMTANPVHHRQTKHIEIDIHFVREKVALG 1017


>ref|XP_002449547.1| hypothetical protein SORBIDRAFT_05g018930 [Sorghum bicolor]
           gi|241935390|gb|EES08535.1| hypothetical protein
           SORBIDRAFT_05g018930 [Sorghum bicolor]
          Length = 619

 Score = 58.9 bits (141), Expect(2) = 6e-14
 Identities = 25/46 (54%), Positives = 38/46 (82%)
 Frame = -2

Query: 271 NLISWTAKIQSTVSRSSAKFEYGSLAHLCAETMWIVHLLREFHVPV 134
           +L+SW++K Q+TVSRSSA+ EY ++AH+ AE  W++ LL+E HVP+
Sbjct: 486 SLVSWSSKRQTTVSRSSAEAEYRAVAHVVAECCWLLQLLQELHVPL 531



 Score = 43.1 bits (100), Expect(2) = 6e-14
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = -1

Query: 116 LYHDNLNTTYMASHPFLHAGTKHVELDHYFIRECVTFG 3
           +Y DN++  YM ++P  H  TKH+E+D +F+RE V  G
Sbjct: 537 VYCDNISAVYMIANPVHHRRTKHIEIDIHFVREKVALG 574


>ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 [Sorghum bicolor]
           gi|241947143|gb|EES20288.1| hypothetical protein
           SORBIDRAFT_0013s009070 [Sorghum bicolor]
          Length = 1219

 Score = 60.1 bits (144), Expect(2) = 7e-14
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = -2

Query: 271 NLISWTAKIQSTVSRSSAKFEYGSLAHLCAETMWIVHLLREFHVPV 134
           NL+SW++K Q+TVSRSSA+ EY ++AH  AET W+  LL+E H P+
Sbjct: 646 NLVSWSSKRQTTVSRSSAEAEYRAVAHAVAETCWLRQLLQELHAPI 691



 Score = 41.6 bits (96), Expect(2) = 7e-14
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = -1

Query: 116 LYHDNLNTTYMASHPFLHAGTKHVELDHYFIRECVTFG 3
           +Y DN++  YM  +P  H  TKH+E+D +F+R+ V  G
Sbjct: 697 VYCDNVSAVYMTQNPVHHRRTKHIEIDIHFVRDKVALG 734


Top