BLASTX nr result

ID: Cimicifuga21_contig00027745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027745
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271244.1| PREDICTED: uncharacterized protein LOC100263...    85   9e-15
ref|XP_002300118.1| predicted protein [Populus trichocarpa] gi|1...    76   3e-12
ref|XP_002328939.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002509497.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002271244.1| PREDICTED: uncharacterized protein LOC100263446 [Vitis vinifera]
           gi|147822220|emb|CAN66013.1| hypothetical protein
           VITISV_024282 [Vitis vinifera]
           gi|296082326|emb|CBI21331.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 56/150 (37%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
 Frame = +2

Query: 20  MESNRKRRGGSSFIKGKLVMSFYRTAAKPTPPVQYNXXXXXXXXXXXXXXXGYLLDQEFL 199
           MESNRKRRG   F+KGKL M FYR A KP+  VQY+               G+++DQE++
Sbjct: 1   MESNRKRRG---FMKGKLAMPFYRVA-KPSSTVQYSSKVKPSQTSPLAPSVGFVVDQEYV 56

Query: 200 VPPSNKKVSYV-KTEGGRDKVSFVKAEGGLDTKVSYVKSEGGRDTKXXXXXXXXXXXXXX 376
           +P   +KV+++   E GRD +      GG                               
Sbjct: 57  IPQPKQKVAFIIPAENGRDSLFGTYGAGG------------------------------- 85

Query: 377 XXDETVDMKAASYISYVQERFRLERVDSER 466
             DE VD KAA+YIS VQERF+L+RV+S++
Sbjct: 86  --DEGVDAKAANYISVVQERFKLDRVNSKK 113


>ref|XP_002300118.1| predicted protein [Populus trichocarpa] gi|118485877|gb|ABK94785.1|
           unknown [Populus trichocarpa]
           gi|222847376|gb|EEE84923.1| predicted protein [Populus
           trichocarpa]
          Length = 123

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
 Frame = +2

Query: 20  MESNRKRRGGSSFIKGKLVMSFYRTAAKPTPPVQYNXXXXXXXXXXXXXXXGYLLDQEFL 199
           MESNRKR+G   F KGKL++ FYR++ KP+  VQY+               GY+ + +++
Sbjct: 1   MESNRKRKG---FTKGKLML-FYRSSPKPSSNVQYSSKVKPSQTSPTTASVGYV-NHDYM 55

Query: 200 VPPSNKKVSYV--KTEGGRDKVSFVKAEGGLDTKVSYVKSEGGRDTKXXXXXXXXXXXXX 373
           + P  +KVS++    +  RDK+S      G+                             
Sbjct: 56  IAPQKQKVSFIVPAADNHRDKLSQFDKFFGV----------------------------- 86

Query: 374 XXXDETVDMKAASYISYVQERFRLERVDSERRNLKD 481
              D +VD KA SYIS VQERF+LER++SER+ L+D
Sbjct: 87  -VGDVSVDTKATSYISSVQERFKLERINSERKQLED 121


>ref|XP_002328939.1| predicted protein [Populus trichocarpa] gi|222839369|gb|EEE77706.1|
           predicted protein [Populus trichocarpa]
          Length = 111

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 48/143 (33%), Positives = 63/143 (44%)
 Frame = +2

Query: 20  MESNRKRRGGSSFIKGKLVMSFYRTAAKPTPPVQYNXXXXXXXXXXXXXXXGYLLDQEFL 199
           MESNRKRRG   F+KGKL M FYR+++K +  VQY+                Y++ Q+F 
Sbjct: 1   MESNRKRRG---FMKGKL-MRFYRSSSKSSSNVQYSSKVKPSQTSPTIASVAYVVHQDFT 56

Query: 200 VPPSNKKVSYVKTEGGRDKVSFVKAEGGLDTKVSYVKSEGGRDTKXXXXXXXXXXXXXXX 379
           +    +KVS+            V A      K+S      G                   
Sbjct: 57  IAQQKQKVSFT-----------VPASDNRHDKLSQFDKFFG-----------------VV 88

Query: 380 XDETVDMKAASYISYVQERFRLE 448
            D  +D KA SYIS VQERF+LE
Sbjct: 89  GDVRIDNKATSYISSVQERFKLE 111


>ref|XP_002509497.1| conserved hypothetical protein [Ricinus communis]
           gi|223549396|gb|EEF50884.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 131

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 50/155 (32%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
 Frame = +2

Query: 20  MESNRKRRGGSSFIKGKLVMSFYRTAAKPTPPV-QYNXXXXXXXXXXXXXXXGYLLDQEF 196
           MESNRKRR G  F+KGKL M FYR+    T  V QY+                       
Sbjct: 1   MESNRKRRVG--FMKGKL-MPFYRSPKPTTTNVNQYSSK--------------------- 36

Query: 197 LVPPSNKKVSYVKTEGGRDKVSFVKAEGGLDTKVSYVKSEGGRDTKXXXXXXXXXXXXXX 376
           ++ PS    +Y           ++ A      KVS+V      + +              
Sbjct: 37  VIKPSQSSSTYNVVHHHHHHQDYIIAPP--KQKVSFVVPAAAENNRADKLLSQLDKLYGI 94

Query: 377 XXDETVDMKAASYISYVQERFRLERVDSERRNLKD 481
             DE+VD++ A+YIS VQERF+LER +SER   +D
Sbjct: 95  SVDESVDVRTATYISSVQERFKLERSNSERVKFED 129


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