BLASTX nr result

ID: Cimicifuga21_contig00027730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027730
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528892.1| hypothetical protein RCOM_0187400 [Ricinus c...    67   2e-09
ref|XP_002330837.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_003517681.1| PREDICTED: uncharacterized protein LOC100777...    56   4e-06

>ref|XP_002528892.1| hypothetical protein RCOM_0187400 [Ricinus communis]
           gi|223531646|gb|EEF33472.1| hypothetical protein
           RCOM_0187400 [Ricinus communis]
          Length = 523

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/95 (43%), Positives = 54/95 (56%)
 Frame = -3

Query: 285 LEPAKLNVKRSRGNKRTKFLAQKTVRHLLQKQNLVNQGHKRDLFSVLEPTMNSNANTNSF 106
           L P+ L VKR  GNK+   +AQKTVR LLQK N V++  + DLFS+LEP +       +F
Sbjct: 323 LSPSGLKVKRLTGNKQKSHIAQKTVRQLLQKHNCVDRNCEADLFSILEPNV-------TF 375

Query: 105 TEVSPEAKALATPKCLLVKQNFLQNYTQRSLSAHK 1
              S     ++TPK L  KQ F+Q   + S S  K
Sbjct: 376 KPDSELNDIVSTPKQLQEKQGFVQKCHEWSSSGQK 410


>ref|XP_002330837.1| predicted protein [Populus trichocarpa]
           gi|224121492|ref|XP_002330841.1| predicted protein
           [Populus trichocarpa] gi|222872639|gb|EEF09770.1|
           predicted protein [Populus trichocarpa]
           gi|222872643|gb|EEF09774.1| predicted protein [Populus
           trichocarpa]
          Length = 505

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/95 (37%), Positives = 53/95 (55%)
 Frame = -3

Query: 285 LEPAKLNVKRSRGNKRTKFLAQKTVRHLLQKQNLVNQGHKRDLFSVLEPTMNSNANTNSF 106
           L P+    KR R  ++   LA K VR LLQ QN +++ ++ D FS+ EP MN +      
Sbjct: 302 LHPSGPKSKRLRCEQKDH-LAHKNVRELLQNQNRMDRDYEADFFSIFEPDMNPS------ 354

Query: 105 TEVSPEAKALATPKCLLVKQNFLQNYTQRSLSAHK 1
           T+ S  A  ++TP+   VKQ FL  + ++S S HK
Sbjct: 355 TQDSQLAVKISTPEHSKVKQGFLHKFHEKSSSGHK 389


>ref|XP_003517681.1| PREDICTED: uncharacterized protein LOC100777884 [Glycine max]
          Length = 509

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 35/95 (36%), Positives = 51/95 (53%)
 Frame = -3

Query: 285 LEPAKLNVKRSRGNKRTKFLAQKTVRHLLQKQNLVNQGHKRDLFSVLEPTMNSNANTNSF 106
           L+P    V++S   K    + QK++  LLQ    V+   + D+FSVLEP      NT+  
Sbjct: 311 LKPIDKTVRKSNVLKPKNIITQKSIEKLLQHHLKVDLDREVDIFSVLEP------NTDFS 364

Query: 105 TEVSPEAKALATPKCLLVKQNFLQNYTQRSLSAHK 1
           T     ++AL+TPK     + FLQN T+ S S+HK
Sbjct: 365 TNALQPSEALSTPKQQKENKGFLQNCTETSSSSHK 399


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