BLASTX nr result

ID: Cimicifuga21_contig00027727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027727
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282954.2| PREDICTED: serine incorporator 3-like [Vitis...   230   8e-59
emb|CBI33332.3| unnamed protein product [Vitis vinifera]              230   8e-59
ref|XP_004134388.1| PREDICTED: serine incorporator 3-like [Cucum...   219   2e-55
ref|XP_002518169.1| conserved hypothetical protein [Ricinus comm...   200   9e-50
ref|XP_003556902.1| PREDICTED: serine incorporator 3-like [Glyci...   186   2e-45

>ref|XP_002282954.2| PREDICTED: serine incorporator 3-like [Vitis vinifera]
          Length = 496

 Score =  230 bits (587), Expect = 8e-59
 Identities = 106/158 (67%), Positives = 123/158 (77%)
 Frame = -2

Query: 476 IRDYGHNVVPKLHYLKACEVGGRDCSHTDGVLRVSLGCFIXXXXXXXXXXXXXXLYEARN 297
           IRDYG  V P+L YL++C + GRDC HT GVLRVSLGCFI              L EA +
Sbjct: 138 IRDYGQKVFPQLQYLESCGIEGRDCFHTMGVLRVSLGCFIFFLLMFLTTFKTSKLDEASS 197

Query: 296 TWHSQWWTLKFVLLIISMAIPFFCPSPFIQYYGEVARIGAGIFLLLQLVSVIQFITWWNN 117
            WHS+WW LKF+LLI+S+ +PFF PS FI +YGE+AR+GAGIFL+LQL+SVIQFITWWNN
Sbjct: 198 EWHSRWWKLKFILLIVSLTVPFFFPSDFIHFYGELARVGAGIFLVLQLISVIQFITWWNN 257

Query: 116 YWMPDSKLKQTCVLGLFMSTAFYIASMCGIILMYSLYA 3
           YWMPD K K +C LGLFMST FYIASMCGI+LMYSLYA
Sbjct: 258 YWMPDEKRKPSCFLGLFMSTLFYIASMCGIVLMYSLYA 295


>emb|CBI33332.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  230 bits (587), Expect = 8e-59
 Identities = 106/158 (67%), Positives = 123/158 (77%)
 Frame = -2

Query: 476 IRDYGHNVVPKLHYLKACEVGGRDCSHTDGVLRVSLGCFIXXXXXXXXXXXXXXLYEARN 297
           IRDYG  V P+L YL++C + GRDC HT GVLRVSLGCFI              L EA +
Sbjct: 44  IRDYGQKVFPQLQYLESCGIEGRDCFHTMGVLRVSLGCFIFFLLMFLTTFKTSKLDEASS 103

Query: 296 TWHSQWWTLKFVLLIISMAIPFFCPSPFIQYYGEVARIGAGIFLLLQLVSVIQFITWWNN 117
            WHS+WW LKF+LLI+S+ +PFF PS FI +YGE+AR+GAGIFL+LQL+SVIQFITWWNN
Sbjct: 104 EWHSRWWKLKFILLIVSLTVPFFFPSDFIHFYGELARVGAGIFLVLQLISVIQFITWWNN 163

Query: 116 YWMPDSKLKQTCVLGLFMSTAFYIASMCGIILMYSLYA 3
           YWMPD K K +C LGLFMST FYIASMCGI+LMYSLYA
Sbjct: 164 YWMPDEKRKPSCFLGLFMSTLFYIASMCGIVLMYSLYA 201


>ref|XP_004134388.1| PREDICTED: serine incorporator 3-like [Cucumis sativus]
           gi|449487606|ref|XP_004157710.1| PREDICTED: serine
           incorporator 3-like [Cucumis sativus]
          Length = 441

 Score =  219 bits (557), Expect = 2e-55
 Identities = 100/157 (63%), Positives = 115/157 (73%)
 Frame = -2

Query: 476 IRDYGHNVVPKLHYLKACEVGGRDCSHTDGVLRVSLGCFIXXXXXXXXXXXXXXLYEARN 297
           +RDYG  ++P+LHYLK C  GG+DC H  GVLRVSLGCFI              L+E RN
Sbjct: 75  LRDYGQRILPQLHYLKPCGAGGQDCFHALGVLRVSLGCFIFFFLMFLSTSRTRKLHEPRN 134

Query: 296 TWHSQWWTLKFVLLIISMAIPFFCPSPFIQYYGEVARIGAGIFLLLQLVSVIQFITWWNN 117
            WHS WW+LKF++ I+SM  PFF P   IQ YGE AR GAGIFL+LQLVS+IQFI+WWN 
Sbjct: 135 VWHSSWWSLKFIVFIVSMLAPFFFPPALIQLYGEFARAGAGIFLILQLVSIIQFISWWNK 194

Query: 116 YWMPDSKLKQTCVLGLFMSTAFYIASMCGIILMYSLY 6
           YWMPD K+KQ+C LGLF ST FYIAS CGI LMYSLY
Sbjct: 195 YWMPDEKMKQSCSLGLFTSTIFYIASFCGIGLMYSLY 231


>ref|XP_002518169.1| conserved hypothetical protein [Ricinus communis]
           gi|223542765|gb|EEF44302.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 588

 Score =  200 bits (509), Expect = 9e-50
 Identities = 97/156 (62%), Positives = 113/156 (72%)
 Frame = -2

Query: 473 RDYGHNVVPKLHYLKACEVGGRDCSHTDGVLRVSLGCFIXXXXXXXXXXXXXXLYEARNT 294
           RDYG  V+ + +Y+KAC V G DC HT GVLR      I              LYEARNT
Sbjct: 67  RDYGQKVLSQFNYIKACGVDGLDCCHTLGVLR------IFFFVMFATTIKARKLYEARNT 120

Query: 293 WHSQWWTLKFVLLIISMAIPFFCPSPFIQYYGEVARIGAGIFLLLQLVSVIQFITWWNNY 114
           WHS WWTLK  LLI+SMA+PFF PS +IQ YGE+ARIGAGIFL+LQLVSVI+FI WWNNY
Sbjct: 121 WHSGWWTLKLFLLILSMAVPFFFPSNYIQVYGELARIGAGIFLVLQLVSVIEFIGWWNNY 180

Query: 113 WMPDSKLKQTCVLGLFMSTAFYIASMCGIILMYSLY 6
           WMPD +++Q+C  GLFMST FYIAS+CGI +MY  Y
Sbjct: 181 WMPDKEMRQSCSFGLFMSTIFYIASVCGIGVMYYFY 216


>ref|XP_003556902.1| PREDICTED: serine incorporator 3-like [Glycine max]
          Length = 471

 Score =  186 bits (472), Expect = 2e-45
 Identities = 90/157 (57%), Positives = 110/157 (70%)
 Frame = -2

Query: 473 RDYGHNVVPKLHYLKACEVGGRDCSHTDGVLRVSLGCFIXXXXXXXXXXXXXXLYEARNT 294
           RDYG +V+  L ++  C   G DC H+ GVLRVSLGC+I              L E +N 
Sbjct: 119 RDYGQSVL--LPFIHFCGNEGDDCFHSLGVLRVSLGCYIFFLVMFLTTVKTRKLCEHQNL 176

Query: 293 WHSQWWTLKFVLLIISMAIPFFCPSPFIQYYGEVARIGAGIFLLLQLVSVIQFITWWNNY 114
           WHS WW +K VLL++SMA+PFF PS  +Q YGE+ARIGAGIFLLLQLVSVI FITWWN Y
Sbjct: 177 WHSGWWEVKSVLLLVSMALPFFFPSELVQIYGEIARIGAGIFLLLQLVSVIHFITWWNKY 236

Query: 113 WMPDSKLKQTCVLGLFMSTAFYIASMCGIILMYSLYA 3
           W PD + KQ C LGLF+ST FY+AS+ GI+ +Y+ YA
Sbjct: 237 WTPDEERKQRCSLGLFLSTMFYVASISGIVYLYTSYA 273


Top