BLASTX nr result

ID: Cimicifuga21_contig00027709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027709
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271999.1| PREDICTED: uncharacterized protein LOC100251...    74   1e-11
ref|XP_004141819.1| PREDICTED: uncharacterized protein LOC101213...    71   1e-10
ref|XP_002304238.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
emb|CBI35826.3| unnamed protein product [Vitis vinifera]               56   4e-06

>ref|XP_002271999.1| PREDICTED: uncharacterized protein LOC100251482 [Vitis vinifera]
          Length = 1409

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 61/176 (34%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
 Frame = +2

Query: 2   SDVSSAGQAAEKAVLRRWSGASDMSMDLSSEKKDXXXXXXXXXXXXXXXXXXXXXXXXXV 181
           SDVSSA    EKAVLRRWSGASDMS+DLS EKKD                          
Sbjct: 345 SDVSSAPAVVEKAVLRRWSGASDMSIDLSFEKKDTESPLCTPSTSSL------------- 391

Query: 182 PKDNKLLKDTATSSVTK-------------FRDLSGS-EGDSKLK---EQSVSQTNAEGF 310
               K L DTAT +  +             F+D S S  G   ++    Q+VSQT    F
Sbjct: 392 -PQTKSLTDTATPNSAEPKGVFPPRPCDSGFKDPSNSGTGSVSVRADDHQAVSQTQFRSF 450

Query: 311 SSKEEAIGLRNQIGLGMQSTAFSGRSEGVGSKDLTSPETESRASFDSSEGVGPKSQ 478
             K E +G  N   L  +    SG  +   +KD  + E +S+   D +E  G K+Q
Sbjct: 451 QGKAEKLGFTNHSALQERLKGSSGGEDHGVNKDQVASEIQSKVVSDRAEPAGLKNQ 506


>ref|XP_004141819.1| PREDICTED: uncharacterized protein LOC101213033 [Cucumis sativus]
           gi|449480667|ref|XP_004155962.1| PREDICTED:
           uncharacterized LOC101213033 [Cucumis sativus]
          Length = 1411

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
 Frame = +2

Query: 2   SDVSSAGQAAEKAVLRRWSGASDMSMDLSSEKKDXXXXXXXXXXXXXXXXXXXXXXXXXV 181
           SDVSSA  A EKAVLRRWSG SDMS+D S+EKKD                          
Sbjct: 362 SDVSSAPSAVEKAVLRRWSGVSDMSIDFSNEKKDIESPLCTPSSSSISDTKSNVFSSATE 421

Query: 182 PKDNKLLKDTATSSVTKFRDLSGSEGDSKLKEQSVSQTNAEGFSSKE------------- 322
            +  K L D  + +  + R      GD + K+Q   Q   E ++ KE             
Sbjct: 422 IESEKRLADLESKTGLEKRGSLVRVGDDESKQQGEEQNPFESYTGKEAWASSSQAQFRSI 481

Query: 323 ----EAIGLRNQ-IGLGMQSTAFSGRSEGVGSKDLTSPETESRASFDSSEGVGPKSQPAS 487
               + +GL ++ +  G      S   +  G K +   ET+ ++S D +E  G K+Q AS
Sbjct: 482 SGGADPVGLNDRGVSKGSVKNLSSSDDKSKGFKGVLVTETQGKSSVDRAEIDGAKNQVAS 541


>ref|XP_002304238.1| predicted protein [Populus trichocarpa] gi|222841670|gb|EEE79217.1|
           predicted protein [Populus trichocarpa]
          Length = 1250

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 55/164 (33%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
 Frame = +2

Query: 2   SDVSSAGQAAEKAVLRRWSGASDMSMDLSSEKKDXXXXXXXXXXXXXXXXXXXXXXXXXV 181
           SDVSSA  A EKAVL+RWSGASDMS+DL ++KKD                         V
Sbjct: 178 SDVSSAS-AIEKAVLKRWSGASDMSIDLGNDKKDDGNIDSPLCTPSSSFVSGTKSNVFPV 236

Query: 182 ----PKDNKLLKDTAT-SSVTKFRDLSGSEGDSKLKEQSVSQTNAEGFSSKEEAIGLRNQ 346
                KD K   DTA+ +++ K      +   S+LK+Q   QT+  G   K+E + L+  
Sbjct: 237 SSDDDKDQKGFNDTASAANLVKLE----TRSVSRLKDQGELQTHGGGIVGKDEEVNLKGN 292

Query: 347 IGLGMQSTA----FSGRSEGVGSKDLTSPETESRASFDSSEGVG 466
           +   + S A     +GR E  G  D    E +   + D  E  G
Sbjct: 293 LKDQVVSLAELRSSAGRGEETGVGDQVVREDKLTGTSDREEKTG 336


>emb|CBI35826.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = +2

Query: 2   SDVSSAGQAAEKAVLRRWSGASDMSMDLSSEKKD 103
           SDVSSA    EKAVLRRWSGASDMS+DLS EKKD
Sbjct: 296 SDVSSAPAVVEKAVLRRWSGASDMSIDLSFEKKD 329


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