BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027691
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat...   272   4e-71
ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|2...   258   8e-67
ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp....   246   3e-63
ref|NP_196448.2| pentatricopeptide repeat-containing protein [Ar...   246   3e-63
emb|CAC08331.1| putative protein [Arabidopsis thaliana]               246   3e-63

>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
           gi|296085293|emb|CBI29025.3| unnamed protein product
           [Vitis vinifera]
          Length = 854

 Score =  272 bits (695), Expect = 4e-71
 Identities = 130/208 (62%), Positives = 160/208 (76%)
 Frame = -3

Query: 626 LKYLAVDVVNSRCRMTPGALGFFIRCLGSHGLVEEAVYLFEQSKKFKLCVVNSYSYNCLI 447
           L  L++D+VNSRC M+PGALGFFIRCLGS GLVEEA  LF+Q K  +LCV NSYS+NCL+
Sbjct: 147 LSLLSMDIVNSRCAMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLL 206

Query: 446 EALAKAGRFELVETRLREMRDEGWEADKFTFTPILQAYCNARKFSEALFVFNQICDRGWV 267
           EA++K+G  +LVE RL+EM D GWE DK+T T +LQAYCN+RKF +AL VFN+I  RGWV
Sbjct: 207 EAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV 266

Query: 266 DEHTFTILMIAFSKSGKVDMAFELVERMESLNMSPTEKTLCSLIHGFTGESRLDKALQLF 87
           D H  +IL++ FSK G+VD AFEL+ERME L +   EKT C LIHGF  +SR+DKALQLF
Sbjct: 267 DGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLF 326

Query: 86  DKMRVLAFNPDLPLYSVLIEGLCKTKEV 3
            KM+   F PD+ +Y  LI GLC  KE+
Sbjct: 327 KKMQKSGFAPDVSVYDALIGGLCAKKEI 354



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 3/204 (1%)
 Frame = -3

Query: 605  VVNSRCRMTPGALGFFIRCLGSHGLVEEAVYLFEQSKKFKLCVVNSYSYNCLIEALAKAG 426
            +V    R    +    I  L + G ++ A+ LF    +   C  N   YN LI+ L+ + 
Sbjct: 448  MVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVG-CKQNVLLYNNLIDKLSNSN 506

Query: 425  RFELVETRLREMRDEGWEADKFTFTPILQAYCNARKFSEALFVFNQICDRG---WVDEHT 255
            R E     L+EM+  G+   +FT   I    C     + AL +  ++   G   W+    
Sbjct: 507  RLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKH-- 564

Query: 254  FTILMIAFSKSGKVDMAFELVERMESLNMSPTEKTLCSLIHGFTGESRLDKALQLFDKMR 75
            +T+L+    K  +   A   +  M      P      + I GF     +D+AL++F  + 
Sbjct: 565  YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDIC 624

Query: 74   VLAFNPDLPLYSVLIEGLCKTKEV 3
               + PD+  Y+ LI G CK K V
Sbjct: 625  ARGYCPDVVAYNTLINGFCKVKRV 648



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
 Frame = -3

Query: 461  YNCLIEALAKAGRFELVETRLREMRDEGWEADKFTFTPILQAYCNARKFSEALFVFNQIC 282
            Y  L++ L K  R       L EM  EG+  D   ++  +  +   +   +AL +F  IC
Sbjct: 565  YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDIC 624

Query: 281  DRGWV-DEHTFTILMIAFSKSGKVDMAFELVERMESLNMSPTEKTLCSLIHGFTGESRLD 105
             RG+  D   +  L+  F K  +V  A ++++ M +  + P+  T   LI G+     +D
Sbjct: 625  ARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDID 684

Query: 104  KALQLFDKMRVLAFNPDLPLYSVLIEGLC 18
            +A     +M      P++  Y+ LI+GLC
Sbjct: 685  QAFHCLSRMVGKEREPNVITYTTLIDGLC 713


>ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|222856609|gb|EEE94156.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  258 bits (658), Expect = 8e-67
 Identities = 126/208 (60%), Positives = 157/208 (75%)
 Frame = -3

Query: 626 LKYLAVDVVNSRCRMTPGALGFFIRCLGSHGLVEEAVYLFEQSKKFKLCVVNSYSYNCLI 447
           L+ L++DVVNSRC M+PGALGF IRCLG+ GLV EA  LF+Q +K  LCV NSYSY CL+
Sbjct: 14  LRALSMDVVNSRCLMSPGALGFLIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLL 73

Query: 446 EALAKAGRFELVETRLREMRDEGWEADKFTFTPILQAYCNARKFSEALFVFNQICDRGWV 267
           E L+K+   +L+E RL+EM D GW  DK+T TP+LQ YCN  +F +AL VFN+I DRGWV
Sbjct: 74  EVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWV 133

Query: 266 DEHTFTILMIAFSKSGKVDMAFELVERMESLNMSPTEKTLCSLIHGFTGESRLDKALQLF 87
           DE+ F+IL++AFSK GKVD A EL+E ME  N+   +KT CSLI+GF  ESR+DKAL LF
Sbjct: 134 DEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLF 193

Query: 86  DKMRVLAFNPDLPLYSVLIEGLCKTKEV 3
           DKM+   F PD+ LY V+I GLC  K+V
Sbjct: 194 DKMKKSGFTPDISLYDVIIGGLCVNKDV 221



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
 Frame = -3

Query: 536 GLVEEAVYLFEQSKKFKLCVVNSYSYNCLIEALAKAGRFELVETRLREMRDEGWEADKFT 357
           G ++ AV LF    +   C  +   YN LI+ L  + R +     L+EM + G E   FT
Sbjct: 338 GDLDLAVGLFRDMARIG-CKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFT 396

Query: 356 FTPILQAYCNARKFSEALFVFNQICDRGWVD--EHTFTILMIAFSKSGKVDMAFELVERM 183
              I    C     S AL +  ++   G V   +H+ T L+    K GK   A + +  M
Sbjct: 397 NNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHS-TSLVKELCKHGKEVEACKFLVDM 455

Query: 182 ESLNMSPTEKTLCSLIHGFTGESRLDKALQLFDKMRVLAFNPDLPLYSVLIEGLCKTKEV 3
                 P      + + G      +D+AL+LF  +    + PD+  Y++LI+GLCKT+ +
Sbjct: 456 AEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRI 515


>ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319188|gb|EFH49610.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1281

 Score =  246 bits (628), Expect = 3e-63
 Identities = 121/210 (57%), Positives = 155/210 (73%), Gaps = 2/210 (0%)
 Frame = -3

Query: 626 LKYLAVDVVNSRCRMTPGALGFFIRCLGSHGLVEEAVYLFEQSKKFKLCVVNSYSYNCLI 447
           L  L  D++NSRC M+PGALGFFIRCLG+ GLVEEA  +F++ ++  LCV N+Y+YNCL+
Sbjct: 125 LTALVGDILNSRCLMSPGALGFFIRCLGNAGLVEEASSVFDRVREMGLCVPNAYTYNCLL 184

Query: 446 EALAKAGR--FELVETRLREMRDEGWEADKFTFTPILQAYCNARKFSEALFVFNQICDRG 273
           EA++K+     ELVE RL+EMRD G+  DKFT TP+LQ YCN  K   AL VFN+I  RG
Sbjct: 185 EAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNNGKSERALSVFNEILSRG 244

Query: 272 WVDEHTFTILMIAFSKSGKVDMAFELVERMESLNMSPTEKTLCSLIHGFTGESRLDKALQ 93
           W+DEH  TIL+++F K G+VD AFEL+E +E  ++    KT C LIHGF  ESR+DKA Q
Sbjct: 245 WLDEHISTILVVSFCKWGQVDKAFELIEMLEERHIRLNYKTFCVLIHGFVKESRIDKAFQ 304

Query: 92  LFDKMRVLAFNPDLPLYSVLIEGLCKTKEV 3
           LF+KMR +  NPD+ LY VLI GLCK K++
Sbjct: 305 LFEKMRRMGMNPDIALYDVLIGGLCKHKDL 334



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
 Frame = -3

Query: 464  SYNCLIEALAKAGRFELVETRLREMRD---EGWEADKFTFTPILQAYCNARKFSEALFVF 294
            SY   IE L    R E V+  L   RD    G   D   +  +++A C A + +EA  +F
Sbjct: 581  SYTAAIEGLI---RNEGVDRGLELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLF 637

Query: 293  NQICDRGWVDE-HTFTILMIAFSKSGKVDMAFELVERMESLNMSPTEKTLCSLIHGFTGE 117
            N++  +G      T+  ++  + K G++D     + RM     +P   T  SLIHG    
Sbjct: 638  NEMVSKGLKPSVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCAS 697

Query: 116  SRLDKALQLFDKMRVLAFNPDLPLYSVLIEGLC 18
             R  +A+  +++M+     P+   +  LI+GLC
Sbjct: 698  RRPSEAISRWNEMKGKDCYPNRITFMALIQGLC 730


>ref|NP_196448.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635617|sp|P0C8Q6.1|PP368_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g08310, mitochondrial; Flags: Precursor
           gi|332003898|gb|AED91281.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 832

 Score =  246 bits (627), Expect = 3e-63
 Identities = 121/210 (57%), Positives = 155/210 (73%), Gaps = 2/210 (0%)
 Frame = -3

Query: 626 LKYLAVDVVNSRCRMTPGALGFFIRCLGSHGLVEEAVYLFEQSKKFKLCVVNSYSYNCLI 447
           LK L VDV+NSRC M+PGA GFFIRCLG+ GLV+EA  +F++ ++  LCV N+Y+YNCL+
Sbjct: 125 LKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLL 184

Query: 446 EALAKAGR--FELVETRLREMRDEGWEADKFTFTPILQAYCNARKFSEALFVFNQICDRG 273
           EA++K+     ELVE RL+EMRD G+  DKFT TP+LQ YCN  K   AL VFN+I  RG
Sbjct: 185 EAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRG 244

Query: 272 WVDEHTFTILMIAFSKSGKVDMAFELVERMESLNMSPTEKTLCSLIHGFTGESRLDKALQ 93
           W+DEH  TIL+++F K G+VD AFEL+E +E  ++    KT C LIHGF  ESR+DKA Q
Sbjct: 245 WLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQ 304

Query: 92  LFDKMRVLAFNPDLPLYSVLIEGLCKTKEV 3
           LF+KMR +  N D+ LY VLI GLCK K++
Sbjct: 305 LFEKMRRMGMNADIALYDVLIGGLCKHKDL 334


>emb|CAC08331.1| putative protein [Arabidopsis thaliana]
          Length = 1280

 Score =  246 bits (627), Expect = 3e-63
 Identities = 121/210 (57%), Positives = 155/210 (73%), Gaps = 2/210 (0%)
 Frame = -3

Query: 626 LKYLAVDVVNSRCRMTPGALGFFIRCLGSHGLVEEAVYLFEQSKKFKLCVVNSYSYNCLI 447
           LK L VDV+NSRC M+PGA GFFIRCLG+ GLV+EA  +F++ ++  LCV N+Y+YNCL+
Sbjct: 125 LKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLL 184

Query: 446 EALAKAGR--FELVETRLREMRDEGWEADKFTFTPILQAYCNARKFSEALFVFNQICDRG 273
           EA++K+     ELVE RL+EMRD G+  DKFT TP+LQ YCN  K   AL VFN+I  RG
Sbjct: 185 EAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRG 244

Query: 272 WVDEHTFTILMIAFSKSGKVDMAFELVERMESLNMSPTEKTLCSLIHGFTGESRLDKALQ 93
           W+DEH  TIL+++F K G+VD AFEL+E +E  ++    KT C LIHGF  ESR+DKA Q
Sbjct: 245 WLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQ 304

Query: 92  LFDKMRVLAFNPDLPLYSVLIEGLCKTKEV 3
           LF+KMR +  N D+ LY VLI GLCK K++
Sbjct: 305 LFEKMRRMGMNADIALYDVLIGGLCKHKDL 334