BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027655
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889740.1| hypothetical protein ARALYDRAFT_888168 [Arab...   198   6e-49
ref|NP_001031011.1| importin alpha isoform 4 [Arabidopsis thalia...   197   1e-48
ref|NP_172398.1| importin alpha isoform 4 [Arabidopsis thaliana]...   197   1e-48
ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
gb|ACU56981.1| importin alpha [Citrus sinensis]                       196   2e-48

>ref|XP_002889740.1| hypothetical protein ARALYDRAFT_888168 [Arabidopsis lyrata subsp.
           lyrata] gi|297335582|gb|EFH65999.1| hypothetical protein
           ARALYDRAFT_888168 [Arabidopsis lyrata subsp. lyrata]
          Length = 538

 Score =  198 bits (504), Expect = 6e-49
 Identities = 94/128 (73%), Positives = 108/128 (84%), Gaps = 2/128 (1%)
 Frame = -3

Query: 626 AWAISNATSGGSHEQIQYLVSQGSIKPLCDLLVCPDPRIVTVCLEGLENILKAGETDKEM 447
           AWAISNATSGGSHEQIQYLV+QG IKPLCDLL+CPDPRIVTVCLEGLENILK GE DKEM
Sbjct: 396 AWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKEM 455

Query: 446 GKSGGVNIFAQAVDECEGLDKIENLQSHDNNEIYEKAVKLLEKYWV--XXXXXXXXDGVD 273
           G +GGVN++AQ ++E +GLDK+ENLQSHDNNEIYEKAVK+LE+YW            G +
Sbjct: 456 GLNGGVNLYAQIIEESDGLDKVENLQSHDNNEIYEKAVKILERYWAEEEEEQILQDGGNE 515

Query: 272 STQQVFNF 249
           ++QQ FNF
Sbjct: 516 NSQQAFNF 523


>ref|NP_001031011.1| importin alpha isoform 4 [Arabidopsis thaliana]
           gi|332190302|gb|AEE28423.1| importin alpha isoform 4
           [Arabidopsis thaliana]
          Length = 456

 Score =  197 bits (502), Expect = 1e-48
 Identities = 94/128 (73%), Positives = 107/128 (83%), Gaps = 2/128 (1%)
 Frame = -3

Query: 626 AWAISNATSGGSHEQIQYLVSQGSIKPLCDLLVCPDPRIVTVCLEGLENILKAGETDKEM 447
           AWAISNATSGGSHEQIQYLV+QG IKPLCDLL+CPDPRIVTVCLEGLENILK GE DKEM
Sbjct: 315 AWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKEM 374

Query: 446 GKSGGVNIFAQAVDECEGLDKIENLQSHDNNEIYEKAVKLLEKYWV--XXXXXXXXDGVD 273
           G + GVN++AQ ++E +GLDK+ENLQSHDNNEIYEKAVK+LE+YW            G D
Sbjct: 375 GLNSGVNLYAQIIEESDGLDKVENLQSHDNNEIYEKAVKILERYWAEEEEEQILQDGGND 434

Query: 272 STQQVFNF 249
           ++QQ FNF
Sbjct: 435 NSQQAFNF 442


>ref|NP_172398.1| importin alpha isoform 4 [Arabidopsis thaliana]
           gi|30681049|ref|NP_849623.1| importin alpha isoform 4
           [Arabidopsis thaliana] gi|3249096|gb|AAC24079.1| Match
           to mRNA for importin alpha-like protein 4 (impa4)
           gb|Y14616 from A. thaliana. ESTs gb|N96440, gb|N37503,
           gb|N37498 and gb|T42198 come from this gene [Arabidopsis
           thaliana] gi|20259334|gb|AAM13992.1| putative importin
           alpha protein [Arabidopsis thaliana]
           gi|21436201|gb|AAM51388.1| putative importin alpha
           protein [Arabidopsis thaliana]
           gi|222422859|dbj|BAH19416.1| AT1G09270 [Arabidopsis
           thaliana] gi|332190300|gb|AEE28421.1| importin alpha
           isoform 4 [Arabidopsis thaliana]
           gi|332190301|gb|AEE28422.1| importin alpha isoform 4
           [Arabidopsis thaliana]
          Length = 538

 Score =  197 bits (502), Expect = 1e-48
 Identities = 94/128 (73%), Positives = 107/128 (83%), Gaps = 2/128 (1%)
 Frame = -3

Query: 626 AWAISNATSGGSHEQIQYLVSQGSIKPLCDLLVCPDPRIVTVCLEGLENILKAGETDKEM 447
           AWAISNATSGGSHEQIQYLV+QG IKPLCDLL+CPDPRIVTVCLEGLENILK GE DKEM
Sbjct: 397 AWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKEM 456

Query: 446 GKSGGVNIFAQAVDECEGLDKIENLQSHDNNEIYEKAVKLLEKYWV--XXXXXXXXDGVD 273
           G + GVN++AQ ++E +GLDK+ENLQSHDNNEIYEKAVK+LE+YW            G D
Sbjct: 457 GLNSGVNLYAQIIEESDGLDKVENLQSHDNNEIYEKAVKILERYWAEEEEEQILQDGGND 516

Query: 272 STQQVFNF 249
           ++QQ FNF
Sbjct: 517 NSQQAFNF 524


>ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  197 bits (501), Expect = 1e-48
 Identities = 97/128 (75%), Positives = 106/128 (82%), Gaps = 2/128 (1%)
 Frame = -3

Query: 626 AWAISNATSGGSHEQIQYLVSQGSIKPLCDLLVCPDPRIVTVCLEGLENILKAGETDKEM 447
           AWAISNATS GSHEQIQ+LVSQG IKPLCDLL+CPDPRIVTVCLEGLENILK GE DKEM
Sbjct: 395 AWAISNATSAGSHEQIQFLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKEM 454

Query: 446 GKSGGVNIFAQAVDECEGLDKIENLQSHDNNEIYEKAVKLLEKYWV--XXXXXXXXDGVD 273
           G +GGVN++AQ VDEC+GLDKIENLQ+HDNNEIYEKAVK+LE+YW           DG D
Sbjct: 455 GLNGGVNLYAQMVDECDGLDKIENLQTHDNNEIYEKAVKILERYWAEEEDGEPIVQDGGD 514

Query: 272 STQQVFNF 249
             QQ F F
Sbjct: 515 GNQQGFAF 522


>gb|ACU56981.1| importin alpha [Citrus sinensis]
          Length = 535

 Score =  196 bits (499), Expect = 2e-48
 Identities = 93/129 (72%), Positives = 106/129 (82%), Gaps = 3/129 (2%)
 Frame = -3

Query: 626 AWAISNATSGGSHEQIQYLVSQGSIKPLCDLLVCPDPRIVTVCLEGLENILKAGETDKEM 447
           AWAISNATSGGSH+QIQ+LVSQG IKPLCDLLVCPDPRIVTVCLEGLENILK GE DKEM
Sbjct: 392 AWAISNATSGGSHQQIQFLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEADKEM 451

Query: 446 GKSGGVNIFAQAVDECEGLDKIENLQSHDNNEIYEKAVKLLEKYWV---XXXXXXXXDGV 276
           G + G+N++AQ +DEC+GLDKIENLQ+HDNNEIYEKAVK+LE+YW             G+
Sbjct: 452 GMNNGINVYAQMIDECDGLDKIENLQTHDNNEIYEKAVKILERYWAEEEEEEQLIQEGGI 511

Query: 275 DSTQQVFNF 249
            + QQ F F
Sbjct: 512 GNQQQGFGF 520