BLASTX nr result

ID: Cimicifuga21_contig00027642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027642
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20118.3| unnamed protein product [Vitis vinifera]              162   3e-38
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   151   6e-35
emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]   146   2e-33
emb|CAN61323.1| hypothetical protein VITISV_012107 [Vitis vinifera]   142   4e-32
emb|CAN75287.1| hypothetical protein VITISV_037638 [Vitis vinifera]   141   5e-32

>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score =  162 bits (410), Expect = 3e-38
 Identities = 69/87 (79%), Positives = 79/87 (90%)
 Frame = +2

Query: 2    INLWMHALRTAVYILNRVPSKVVPKTHFEMWKGWKPSLRHLHVWGCPAEARIYNPHERKL 181
            I+LW  AL+TA+YILNRVPSK VPKT FE+W G KPSLRH+H+WGCPAEARIYNPHE+KL
Sbjct: 997  ISLWGEALKTAMYILNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAEARIYNPHEKKL 1056

Query: 182  DPKTISGYLIGYPEKSKGYRFYCPNHS 262
            D +T+SGY IGYP+KSKGYRFYCPNHS
Sbjct: 1057 DSRTVSGYFIGYPDKSKGYRFYCPNHS 1083


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  151 bits (381), Expect = 6e-35
 Identities = 63/85 (74%), Positives = 75/85 (88%)
 Frame = +2

Query: 5   NLWMHALRTAVYILNRVPSKVVPKTHFEMWKGWKPSLRHLHVWGCPAEARIYNPHERKLD 184
           +LW  AL+TA YILNRVP+K VPKT FE++KGWKPSL+H+ VWGCP+E RIYNP E+KLD
Sbjct: 583 SLWAEALKTAAYILNRVPTKAVPKTPFELFKGWKPSLKHMRVWGCPSEVRIYNPQEKKLD 642

Query: 185 PKTISGYLIGYPEKSKGYRFYCPNH 259
           P+TISGY IGY E+SKGYRFYCP+H
Sbjct: 643 PRTISGYFIGYAERSKGYRFYCPHH 667


>emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]
          Length = 764

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/87 (74%), Positives = 72/87 (82%)
 Frame = +2

Query: 2   INLWMHALRTAVYILNRVPSKVVPKTHFEMWKGWKPSLRHLHVWGCPAEARIYNPHERKL 181
           I+LWM AL+T VY+LNRVP+K  PKT FE+W   KPSLRHLHVWGCP E RIY+PHE+KL
Sbjct: 523 ISLWMEALKTVVYLLNRVPTKTXPKTPFELWTRRKPSLRHLHVWGCPTEGRIYSPHEKKL 582

Query: 182 DPKTISGYLIGYPEKSKGYRFYCPNHS 262
           D KTISGY I YP KSKGYRFY PNHS
Sbjct: 583 DFKTISGYFIDYPMKSKGYRFYYPNHS 609


>emb|CAN61323.1| hypothetical protein VITISV_012107 [Vitis vinifera]
          Length = 1077

 Score =  142 bits (357), Expect = 4e-32
 Identities = 60/85 (70%), Positives = 72/85 (84%)
 Frame = +2

Query: 8   LWMHALRTAVYILNRVPSKVVPKTHFEMWKGWKPSLRHLHVWGCPAEARIYNPHERKLDP 187
           LW+ AL+ AVYILN+V +K +PKT FE+WKGWKPSLRH+ VWGC +E RIYNP E+KLDP
Sbjct: 304 LWIEALKKAVYILNQVLTKAIPKTPFELWKGWKPSLRHMRVWGCLSEVRIYNPQEKKLDP 363

Query: 188 KTISGYLIGYPEKSKGYRFYCPNHS 262
           +TISGY IGY EK KGY FYCP+H+
Sbjct: 364 RTISGYFIGYVEKFKGYIFYCPSHN 388


>emb|CAN75287.1| hypothetical protein VITISV_037638 [Vitis vinifera]
          Length = 177

 Score =  141 bits (356), Expect = 5e-32
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = +2

Query: 8   LWMHALRTAVYILNRVPSKVVPKTHFEMWKGWKPSLRHLHVWGCPAEARIYNPHERKLDP 187
           LW  AL+T VYILN+VP+KVVPKT FE+WK WKPSLRH+ VWGC +E RIYNP E+KLDP
Sbjct: 35  LWTEALKTIVYILNQVPTKVVPKTPFELWKAWKPSLRHMRVWGCLSEVRIYNPQEKKLDP 94

Query: 188 KTISGYLIGYPEKSKGYRFYCPNHS 262
           +TISGY I Y EKSK Y+FYCP H+
Sbjct: 95  RTISGYFIRYVEKSKEYKFYCPFHT 119


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