BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027597
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [...   315   8e-84
ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...   307   3e-81
ref|XP_002525052.1| conserved hypothetical protein [Ricinus comm...   276   6e-72
ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like ...   272   8e-71
ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana] gi|7...   271   2e-70

>ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [Vitis vinifera]
           gi|297736457|emb|CBI25328.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  315 bits (808), Expect = 8e-84
 Identities = 163/263 (61%), Positives = 201/263 (76%), Gaps = 7/263 (2%)
 Frame = +3

Query: 54  IDMNQSSNLLDEALSLNSESRVSLPPGRVLLIEDCVETSGAFVLNHLIKRALSIQSSGV- 230
           +D ++SS LLDEAL+L+          RV++IEDCVET+GAFVL+H++KR+L++ +S   
Sbjct: 1   MDHHRSSTLLDEALALDWTQP------RVIVIEDCVETNGAFVLHHVLKRSLALHTSSTS 54

Query: 231 -VFFVSLSHPFSHYDRILRKQGCNLVTLTESSRFLFFDMRKLDCPDGTEG-----LVELY 392
            V F++ S PFSHYDRILRK GCNLVT  ++ RF+FF++  L+CPDG EG     L  LY
Sbjct: 55  AVIFLAFSQPFSHYDRILRKLGCNLVTPKDNKRFVFFNLLTLECPDGDEGKTSGGLPSLY 114

Query: 393 RKIRKTVEISSSREHNRSDITIMIDDISLMEVAAHGSSKYVLDFLHYCHTLTSEMGCSLV 572
           R+I+K   I +  E NR  ITIMIDDISLMEVAA+GS+ +VLDFLHYCHTLT E GC LV
Sbjct: 115 REIQKV--IIALHEENRKSITIMIDDISLMEVAANGSTNHVLDFLHYCHTLTLEFGCLLV 172

Query: 573 MLNHDDIYSNTIAPSMILQLEYLADFVIKAEPLVTGLAADVHGQLTVLNKGVVEDHGTIR 752
            +NH DIYS+   P+++LQ+EYLAD +IKAEPL TGLA DVHGQLTVLNKG+ E  G  R
Sbjct: 173 TVNHGDIYSSMERPALLLQMEYLADILIKAEPLSTGLATDVHGQLTVLNKGICEGQGNSR 232

Query: 753 NRVHNFHFKVKENSVEYFYPGSR 821
           NR HNFHFKVKENSVE FYPG+R
Sbjct: 233 NRTHNFHFKVKENSVECFYPGTR 255


>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  307 bits (786), Expect = 3e-81
 Identities = 159/260 (61%), Positives = 195/260 (75%), Gaps = 7/260 (2%)
 Frame = +3

Query: 63  NQSSNLLDEALSLNSESRVSLPPGRVLLIEDCVETSGAFVLNHLIKRALSIQS-SGVVFF 239
           N+S NLLDEAL L+ ++      G+V+LIEDCVETSG FVL+ L+KR LS QS +  V F
Sbjct: 3   NRSLNLLDEALGLDYQTDPWPLRGKVVLIEDCVETSGCFVLHQLLKRTLSSQSPNNTVIF 62

Query: 240 VSLSHPFSHYDRILRKQGCNLVTLTESSRFLFFDMRKLDCPD------GTEGLVELYRKI 401
           ++ SHP SHYDRILRK GCNLV   E+ RF FFDM KL CPD      G  G   LY KI
Sbjct: 63  LAFSHPLSHYDRILRKLGCNLVAQRENGRFFFFDMLKLLCPDEKEGKTGKGGFTALYWKI 122

Query: 402 RKTVEISSSREHNRSDITIMIDDISLMEVAAHGSSKYVLDFLHYCHTLTSEMGCSLVMLN 581
           + T  I +  E+N++  TIMIDD+SLMEVAAHGSS +VL+F+HYCHTLTSE+GCSL+ LN
Sbjct: 123 QNT--ICALPENNKNHATIMIDDMSLMEVAAHGSSDHVLNFMHYCHTLTSELGCSLITLN 180

Query: 582 HDDIYSNTIAPSMILQLEYLADFVIKAEPLVTGLAADVHGQLTVLNKGVVEDHGTIRNRV 761
           H+DIY++   P+ +LQ +YL D +IKAEPL TGLAADVHGQLTVLN+      G+ +N++
Sbjct: 181 HEDIYTSMERPTFMLQTKYLVDVLIKAEPLATGLAADVHGQLTVLNRDFCNVKGSSKNKI 240

Query: 762 HNFHFKVKENSVEYFYPGSR 821
            NFHFKVKENSVEYFYPG+R
Sbjct: 241 SNFHFKVKENSVEYFYPGTR 260


>ref|XP_002525052.1| conserved hypothetical protein [Ricinus communis]
           gi|223535633|gb|EEF37299.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score =  276 bits (706), Expect = 6e-72
 Identities = 149/275 (54%), Positives = 184/275 (66%), Gaps = 26/275 (9%)
 Frame = +3

Query: 75  NLLDEALSLNSESRVSLP-PGRVLLIEDCVETSGAFVLNHLIKRALSIQSSGVVFFVSLS 251
           NLL+EAL L  E+  +    G+V++IED VETSG+F+LNHLIKR LS  S  V+ F++ S
Sbjct: 7   NLLEEALGLEEEASNTWDLRGKVIVIEDRVETSGSFLLNHLIKRILSPNSFKVIIFLAFS 66

Query: 252 HPFSHYDRILRKQGCNLVTLTESSRFLFFDMRKLDCP----------------------- 362
           +PFSHYDRILRK GCNL    +  RF FFDM  L C                        
Sbjct: 67  NPFSHYDRILRKLGCNLAAHKDCGRFFFFDMLMLQCSGEKWLNLFDHKSFEFNSLLDRNE 126

Query: 363 --DGTEGLVELYRKIRKTVEISSSREHNRSDITIMIDDISLMEVAAHGSSKYVLDFLHYC 536
                 G + L+ +I+K   I +  E+ ++ +TIMIDD+SLMEVAA+GSS  VLDFLHYC
Sbjct: 127 GNSNKAGFITLFGEIQKV--ICALPENYKNHVTIMIDDVSLMEVAAYGSSDRVLDFLHYC 184

Query: 537 HTLTSEMGCSLVMLNHDDIYSNTIAPSMILQLEYLADFVIKAEPLVTGLAADVHGQLTVL 716
           HTLTS+ GCSLV LNH+DIYS     + ILQ+EYLAD +IKAEPL TGLA DVHGQLTVL
Sbjct: 185 HTLTSDFGCSLVTLNHEDIYSTMERRAFILQMEYLADILIKAEPLATGLATDVHGQLTVL 244

Query: 717 NKGVVEDHGTIRNRVHNFHFKVKENSVEYFYPGSR 821
           + G+    G ++N++ NF F VKENSVEYFYPGSR
Sbjct: 245 STGICCRKGNLKNKISNFQFMVKENSVEYFYPGSR 279


>ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  272 bits (696), Expect = 8e-71
 Identities = 147/258 (56%), Positives = 182/258 (70%), Gaps = 7/258 (2%)
 Frame = +3

Query: 69  SSNLLDEALSLNSESRVSLPPGRVLLIEDCVETSGAFVLNHLIKRALSI-QSSGVVFFVS 245
           +SNLLDEA+  +  +  +   GR+LL+EDCVETSGAFVL+HL+KRA S   SS VV F++
Sbjct: 5   TSNLLDEAIGFDDPTNPTPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVVIFLA 64

Query: 246 LSHPFSHYDRILRKQGCNLVTLTESSRFLFFDMRKLDCPD------GTEGLVELYRKIRK 407
            S  F HYDRILRK GCNL    +S RF+FFDM  L C D      G   LV LY KI++
Sbjct: 65  FSQSFIHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETGEGVLVGLYCKIQR 124

Query: 408 TVEISSSREHNRSDITIMIDDISLMEVAAHGSSKYVLDFLHYCHTLTSEMGCSLVMLNHD 587
            V   +  + N+  ITI+IDDISL+EVAA+GSS +VLDFLHYCHTL SE+GCS++ L+H+
Sbjct: 125 AVH--ALIQENKKHITIVIDDISLLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIALDHE 182

Query: 588 DIYSNTIAPSMILQLEYLADFVIKAEPLVTGLAADVHGQLTVLNKGVVEDHGTIRNRVHN 767
           D+Y +   P + LQLEYLAD +IK  PL TG+A DVHGQLTVLNK V      +RNRV N
Sbjct: 183 DVYMDIERP-LSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQN 241

Query: 768 FHFKVKENSVEYFYPGSR 821
           F F +KEN  E+FY GSR
Sbjct: 242 FQFYIKENGTEFFYSGSR 259


>ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana]
           gi|75154680|sp|Q8L9Y2.1|ELP6_ARATH RecName:
           Full=Elongator complex protein 6; Short=AtELP6; AltName:
           Full=Elongator component 6; AltName: Full=UPF0405
           protein ELP6 gi|21593728|gb|AAM65695.1| unknown
           [Arabidopsis thaliana] gi|87116610|gb|ABD19669.1|
           At4g10090 [Arabidopsis thaliana]
           gi|110735719|dbj|BAE99839.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657437|gb|AEE82837.1|
           elongator protein 6 [Arabidopsis thaliana]
          Length = 262

 Score =  271 bits (692), Expect = 2e-70
 Identities = 140/264 (53%), Positives = 190/264 (71%), Gaps = 9/264 (3%)
 Frame = +3

Query: 60  MNQSSNLLDEALSLNSESRVSLP-PGRVLLIEDCVETSGAFVLNHLIKRALSIQSSGVVF 236
           M++S NLLD AL  + +  +  P  G+V+LIEDCVETSG+FVL+ L+KR LS  SS  + 
Sbjct: 1   MDRSLNLLDLALGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSSNSSDALI 60

Query: 237 FVSLSHPFSHYDRILRKQGCNLVTLTESSRFLFFDMRKLDCPDGTE------GLVELYRK 398
           F++ + PFSHYDRILRK GCNL T   ++R +FFDM  + C DG +       + +L+R+
Sbjct: 61  FLAFARPFSHYDRILRKLGCNLATHKSNNRLVFFDMLMVKCSDGDQMEDNVSAVAKLFRE 120

Query: 399 IRKTVEISSSREHNRSDITIMIDDISLMEVAAHGS-SKYVLDFLHYCHTLTSEMGCSLVM 575
           I++TV    S      +IT+M+DD+SL+E+A  GS S +VLDFLHYCHTL+SE  CSLV+
Sbjct: 121 IQETVRKLQSV--TSGNITVMVDDMSLLEIATTGSNSDHVLDFLHYCHTLSSESNCSLVI 178

Query: 576 LNHDDIYSNTIAPSMILQLEYLADFVIKAEPLVTGLAADVHGQLTVLNKGVVED-HGTIR 752
           LNH+DIY++   P+ +LQ+  LAD VIKAEPL +GLA DVHGQLTVLNKG+     G+ R
Sbjct: 179 LNHEDIYASMERPAFLLQMVCLADVVIKAEPLASGLANDVHGQLTVLNKGISNSGRGSSR 238

Query: 753 NRVHNFHFKVKENSVEYFYPGSRN 824
           N++ NF F++KEN ++YFYPG R+
Sbjct: 239 NKLQNFQFRIKENGIDYFYPGCRS 262