BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027509
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]   174   7e-42
ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30

>ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 533

 Score =  183 bits (465), Expect = 1e-44
 Identities = 93/135 (68%), Positives = 106/135 (78%)
 Frame = +3

Query: 3   FVHARCMFQNLIHRNTFIYNTMIRGFLQSHLPVTAISCYLDMLNCGLIVNNYTFPPLIKA 182
           F HA  +FQNL  RN F+YN+MIRG++ SH P  AI CYLDMLN GL+ NNYTFPPLIKA
Sbjct: 62  FSHACLIFQNLSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKA 121

Query: 183 CTTLVLPYSKLIGRLVHAHVVTSGFPDDPFVVTSLIELYSSIGDMGSAWRLFYGIPKRDI 362
           CTTL    SKLIG LVHAHVVT GF +DPFVV++LIE YS   DMG+A  LF  IP RD+
Sbjct: 122 CTTLGSS-SKLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDV 180

Query: 363 VLWTAMVDGYGKMGE 407
           VLWTAM+DGYGKMG+
Sbjct: 181 VLWTAMIDGYGKMGD 195



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/133 (25%), Positives = 62/133 (46%)
 Frame = +3

Query: 9   HARCMFQNLIHRNTFIYNTMIRGFLQSHLPVTAISCYLDMLNCGLIVNNYTFPPLIKACT 188
           HAR +F+++  RN   ++ ++  + +       +  +  M   G + N      ++ AC 
Sbjct: 198 HARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACA 257

Query: 189 TLVLPYSKLIGRLVHAHVVTSGFPDDPFVVTSLIELYSSIGDMGSAWRLFYGIPKRDIVL 368
            L    +   G  VH++     F  +P + T+L+++YS  G + SA   F GIP +D   
Sbjct: 258 HLG---ALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGA 314

Query: 369 WTAMVDGYGKMGE 407
           W AM+ G    G+
Sbjct: 315 WNAMISGVAMNGD 327


>emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
          Length = 805

 Score =  174 bits (441), Expect = 7e-42
 Identities = 88/126 (69%), Positives = 100/126 (79%)
 Frame = +3

Query: 30  NLIHRNTFIYNTMIRGFLQSHLPVTAISCYLDMLNCGLIVNNYTFPPLIKACTTLVLPYS 209
           NL  RN F+YN+MIRG++ SH P  AI CYLDMLN GL+ NNYTFPPLIKACTTL    S
Sbjct: 343 NLSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSS-S 401

Query: 210 KLIGRLVHAHVVTSGFPDDPFVVTSLIELYSSIGDMGSAWRLFYGIPKRDIVLWTAMVDG 389
           KLIG LVHAHVVT GF +DPFVV++LIE YS   DMG+A  LF  IP RD+VLWTAM+DG
Sbjct: 402 KLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDG 461

Query: 390 YGKMGE 407
           YGKMG+
Sbjct: 462 YGKMGD 467



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/133 (25%), Positives = 62/133 (46%)
 Frame = +3

Query: 9   HARCMFQNLIHRNTFIYNTMIRGFLQSHLPVTAISCYLDMLNCGLIVNNYTFPPLIKACT 188
           HAR +F+++  RN   ++ ++  + +       +  +  M   G + N      ++ AC 
Sbjct: 470 HARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACA 529

Query: 189 TLVLPYSKLIGRLVHAHVVTSGFPDDPFVVTSLIELYSSIGDMGSAWRLFYGIPKRDIVL 368
            L    +   G  VH++     F  +P + T+L+++YS  G + SA   F GIP +D   
Sbjct: 530 HLG---ALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGA 586

Query: 369 WTAMVDGYGKMGE 407
           W AM+ G    G+
Sbjct: 587 WNAMISGVAMNGD 599


>ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 526

 Score =  148 bits (374), Expect = 4e-34
 Identities = 77/136 (56%), Positives = 99/136 (72%), Gaps = 2/136 (1%)
 Frame = +3

Query: 3   FVHARCMFQNLIHRNTFIYNTMIRGFLQSHLPVTAISCYLDMLNCGLIVNNYTFPPLIKA 182
           F +AR +F++L +RNTF++NTMIRG+LQ   P+ A+SCYL ML  G+ VNNYTFPPLIKA
Sbjct: 56  FSYARSIFRHLTNRNTFMHNTMIRGYLQCRSPLHAVSCYLSMLQNGVAVNNYTFPPLIKA 115

Query: 183 CTTLVLPY--SKLIGRLVHAHVVTSGFPDDPFVVTSLIELYSSIGDMGSAWRLFYGIPKR 356
           C  L LP   S ++GRLVH HVV  G  +DP+VV++ IE YS   ++ +A  LF     +
Sbjct: 116 CIAL-LPSSPSNIVGRLVHGHVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETSYK 174

Query: 357 DIVLWTAMVDGYGKMG 404
           D+VL TAMVDGYGKMG
Sbjct: 175 DVVLGTAMVDGYGKMG 190


>ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 487

 Score =  135 bits (340), Expect = 3e-30
 Identities = 70/135 (51%), Positives = 93/135 (68%)
 Frame = +3

Query: 3   FVHARCMFQNLIHRNTFIYNTMIRGFLQSHLPVTAISCYLDMLNCGLIVNNYTFPPLIKA 182
           F +A  +F+NL  RN F+YN+MIRG+  S  P  AI CYLD+++ G + N YTFPPLIKA
Sbjct: 60  FSYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKA 119

Query: 183 CTTLVLPYSKLIGRLVHAHVVTSGFPDDPFVVTSLIELYSSIGDMGSAWRLFYGIPKRDI 362
           C  LV    K IG LVHAHV+  G+ +D FVV++L+E Y S+ D+  A  LF     +D+
Sbjct: 120 C-ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFY-SLFDLKVARVLFDKSSGKDV 177

Query: 363 VLWTAMVDGYGKMGE 407
           V+WT MVDGYGK+G+
Sbjct: 178 VVWTVMVDGYGKVGD 192



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/131 (23%), Positives = 59/131 (45%)
 Frame = +3

Query: 12  ARCMFQNLIHRNTFIYNTMIRGFLQSHLPVTAISCYLDMLNCGLIVNNYTFPPLIKACTT 191
           AR +F  +  RN   ++ M+  + +       +  +  M    ++ N+     ++ AC  
Sbjct: 196 ARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVLTACAH 255

Query: 192 LVLPYSKLIGRLVHAHVVTSGFPDDPFVVTSLIELYSSIGDMGSAWRLFYGIPKRDIVLW 371
           L        G  +H++    G   +P + T+L+++YS  G + SA  +F GI  +D   W
Sbjct: 256 LGAITQ---GLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAW 312

Query: 372 TAMVDGYGKMG 404
            AM+ G+   G
Sbjct: 313 NAMISGFAMTG 323


>ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 528

 Score =  135 bits (340), Expect = 3e-30
 Identities = 70/135 (51%), Positives = 93/135 (68%)
 Frame = +3

Query: 3   FVHARCMFQNLIHRNTFIYNTMIRGFLQSHLPVTAISCYLDMLNCGLIVNNYTFPPLIKA 182
           F +A  +F+NL  RN F+YN+MIRG+  S  P  AI CYLD+++ G + N YTFPPLIKA
Sbjct: 60  FSYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKA 119

Query: 183 CTTLVLPYSKLIGRLVHAHVVTSGFPDDPFVVTSLIELYSSIGDMGSAWRLFYGIPKRDI 362
           C  LV    K IG LVHAHV+  G+ +D FVV++L+E Y S+ D+  A  LF     +D+
Sbjct: 120 C-ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFY-SLFDLKVARVLFDKSSGKDV 177

Query: 363 VLWTAMVDGYGKMGE 407
           V+WT MVDGYGK+G+
Sbjct: 178 VVWTVMVDGYGKVGD 192



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/131 (23%), Positives = 59/131 (45%)
 Frame = +3

Query: 12  ARCMFQNLIHRNTFIYNTMIRGFLQSHLPVTAISCYLDMLNCGLIVNNYTFPPLIKACTT 191
           AR +F  +  RN   ++ M+  + +       +  +  M    ++ N+     ++ AC  
Sbjct: 196 ARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIASVLTACAH 255

Query: 192 LVLPYSKLIGRLVHAHVVTSGFPDDPFVVTSLIELYSSIGDMGSAWRLFYGIPKRDIVLW 371
           L        G  +H++    G   +P + T+L+++YS  G + SA  +F GI  +D   W
Sbjct: 256 LGAITQ---GLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAW 312

Query: 372 TAMVDGYGKMG 404
            AM+ G+   G
Sbjct: 313 NAMISGFAMTG 323