BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027483
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15850.3| unnamed protein product [Vitis vinifera]              144   6e-33
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   144   6e-33
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   144   6e-33
ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus ...   132   4e-29
ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidops...   125   5e-27

>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  144 bits (364), Expect = 6e-33
 Identities = 78/131 (59%), Positives = 92/131 (70%), Gaps = 4/131 (3%)
 Frame = +1

Query: 124 MAISSLRFPISPWISRTPCSH----SPLKXXXXXXXXXXXXXQTLIVPPLPPPEQSVETR 291
           M +SSLRFP+ PWI     S+    +P                T+       P+QSV+ +
Sbjct: 1   MVVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTE---SNPDQSVQ-K 56

Query: 292 WESFRKKKVVMRVGYVGTHYRGLQIQRDETSFSTIEAELENAIFKAGGMKDSNYGNLHKI 471
           WESFRKKKVVMRVGYVGT+YRGLQ+QRDE+S STIE ELE A+FKAGG++DSNYGNLHKI
Sbjct: 57  WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKI 116

Query: 472 GWVRSSRTDKG 504
           GW RSSRTDKG
Sbjct: 117 GWDRSSRTDKG 127


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  144 bits (364), Expect = 6e-33
 Identities = 78/131 (59%), Positives = 92/131 (70%), Gaps = 4/131 (3%)
 Frame = +1

Query: 124 MAISSLRFPISPWISRTPCSH----SPLKXXXXXXXXXXXXXQTLIVPPLPPPEQSVETR 291
           M +SSLRFP+ PWI     S+    +P                T+       P+QSV+ +
Sbjct: 1   MVVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTE---SNPDQSVQ-K 56

Query: 292 WESFRKKKVVMRVGYVGTHYRGLQIQRDETSFSTIEAELENAIFKAGGMKDSNYGNLHKI 471
           WESFRKKKVVMRVGYVGT+YRGLQ+QRDE+S STIE ELE A+FKAGG++DSNYGNLHKI
Sbjct: 57  WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKI 116

Query: 472 GWVRSSRTDKG 504
           GW RSSRTDKG
Sbjct: 117 GWDRSSRTDKG 127


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  144 bits (364), Expect = 6e-33
 Identities = 78/131 (59%), Positives = 92/131 (70%), Gaps = 4/131 (3%)
 Frame = +1

Query: 124 MAISSLRFPISPWISRTPCSH----SPLKXXXXXXXXXXXXXQTLIVPPLPPPEQSVETR 291
           M +SSLRFP+ PWI     S+    +P                T+       P+QSV+ +
Sbjct: 1   MVVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTE---SNPDQSVQ-K 56

Query: 292 WESFRKKKVVMRVGYVGTHYRGLQIQRDETSFSTIEAELENAIFKAGGMKDSNYGNLHKI 471
           WESFRKKKVVMRVGYVGT+YRGLQ+QRDE+S STIE ELE A+FKAGG++DSNYGNLHKI
Sbjct: 57  WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKI 116

Query: 472 GWVRSSRTDKG 504
           GW RSSRTDKG
Sbjct: 117 GWDRSSRTDKG 127


>ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223543132|gb|EEF44666.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 377

 Score =  132 bits (331), Expect = 4e-29
 Identities = 74/133 (55%), Positives = 85/133 (63%), Gaps = 6/133 (4%)
 Frame = +1

Query: 124 MAISSLRFPISPWISRTPCSHSPLKXXXXXXXXXXXXXQTLIVPPLPPPEQS------VE 285
           MA+SSLRFP+ P + R+P                    +  ++P LP    S      + 
Sbjct: 1   MALSSLRFPLYPLLLRSP---------------RRVFFKFPVIPILPSRLSSQSHAHILS 45

Query: 286 TRWESFRKKKVVMRVGYVGTHYRGLQIQRDETSFSTIEAELENAIFKAGGMKDSNYGNLH 465
            +WE FRKKKVV+RVGYVGT YRGLQ Q DE S STIEAELE AIFKAGG+ DSNYGNLH
Sbjct: 46  QKWEPFRKKKVVLRVGYVGTDYRGLQKQEDEHSLSTIEAELECAIFKAGGILDSNYGNLH 105

Query: 466 KIGWVRSSRTDKG 504
           KI W RSSRTDKG
Sbjct: 106 KIAWARSSRTDKG 118


>ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana]
           gi|3914486|sp|O22928.1|PUSH_ARATH RecName: Full=Putative
           tRNA pseudouridine synthase; AltName: Full=tRNA
           pseudouridylate synthase; AltName: Full=tRNA-uridine
           isomerase gi|2347206|gb|AAC16945.1| putative
           pseudouridine synthase [Arabidopsis thaliana]
           gi|330253276|gb|AEC08370.1| putative tRNA pseudouridine
           synthase [Arabidopsis thaliana]
          Length = 510

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = +1

Query: 262 PPPEQSVETRWESFRKKKVVMRVGYVGTHYRGLQIQRDETSFSTIEAELENAIFKAGGMK 441
           P  +  +  +WES+RKKKVV+R+GYVGT YRGLQIQRD+ S  TIE ELE AI+KAGG++
Sbjct: 47  PSSDNFLADKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSIKTIEGELEVAIYKAGGIR 106

Query: 442 DSNYGNLHKIGWVRSSRTDKG 504
           DSNYG+LHKIGW RSSRTDKG
Sbjct: 107 DSNYGDLHKIGWARSSRTDKG 127