BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027173
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Gly...   456   e-126
ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Gly...   456   e-126
ref|XP_003637393.1| MutS2 family protein [Medicago truncatula] g...   445   e-123
ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|2...   435   e-120
ref|XP_002519048.1| DNA mismatch repair protein muts2, putative ...   426   e-117

>ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
          Length = 902

 Score =  456 bits (1172), Expect = e-126
 Identities = 231/330 (70%), Positives = 272/330 (82%), Gaps = 12/330 (3%)
 Frame = -1

Query: 959  SVDIEGIRHPVLLESFLRSSSSD------------RGNGIMHSKRLSEGEYDLPVPIDIK 816
            +VDI GIRHP+LLES L + S +             GNG M SK + +G  D PVP+D K
Sbjct: 362  TVDIVGIRHPLLLESSLENISDNLTLRSGNAAEFGNGNGTMASKYMPQGISDFPVPVDFK 421

Query: 815  IDHGTKVVVISGPNTGGKTASMKTLGLASIMSKAGLYLPAKGRPRLPWFDLILADIGDHQ 636
            I HGT+VVVISGPNTGGKTASMKTLGLAS+MSKAG++LPAK  P+LPWFDLILADIGDHQ
Sbjct: 422  IGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILADIGDHQ 481

Query: 635  SLEQNLSTFSGHISRICKILELGSKESLVLIDEIGSGTDPSEGVALSASILQYLKDRVNL 456
            SLEQNLSTFSGHISRICKILE+ S +SLVLIDEIG GTDPSEGVALSASILQYLKDRVNL
Sbjct: 482  SLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLKDRVNL 541

Query: 455  AVVTTHYADLSCLKETDSRVENAAMEFCLETLQPTYRILWRCVGNSNALTIAKSIGFDQK 276
            AVVTTHYADLS +KE D+R +NAAMEF LETLQPTYRILW C G+SNAL+IA+SIGFD+ 
Sbjct: 542  AVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQSIGFDRN 601

Query: 275  VLDHAHKWVEKLRPDKQIERKSMLYHSLMEERNTLEAQDRQAVTLHSEIMKLYHEIQDEA 96
            ++D A KWVEK +P++Q ER+ MLY SL EERN L+AQ  +A ++H+EIM +Y+EIQ EA
Sbjct: 602  IIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVYNEIQGEA 661

Query: 95   EDLDRREAALKAKDTQQVLQELKAARAKID 6
            EDLD+RE  L AK+TQQV  EL+ A+++I+
Sbjct: 662  EDLDQREMELMAKETQQVQHELEHAKSQIE 691


>ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
          Length = 914

 Score =  456 bits (1172), Expect = e-126
 Identities = 231/330 (70%), Positives = 272/330 (82%), Gaps = 12/330 (3%)
 Frame = -1

Query: 959  SVDIEGIRHPVLLESFLRSSSSD------------RGNGIMHSKRLSEGEYDLPVPIDIK 816
            +VDI GIRHP+LLES L + S +             GNG M SK + +G  D PVP+D K
Sbjct: 362  TVDIVGIRHPLLLESSLENISDNLTLRSGNAAEFGNGNGTMASKYMPQGISDFPVPVDFK 421

Query: 815  IDHGTKVVVISGPNTGGKTASMKTLGLASIMSKAGLYLPAKGRPRLPWFDLILADIGDHQ 636
            I HGT+VVVISGPNTGGKTASMKTLGLAS+MSKAG++LPAK  P+LPWFDLILADIGDHQ
Sbjct: 422  IGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILADIGDHQ 481

Query: 635  SLEQNLSTFSGHISRICKILELGSKESLVLIDEIGSGTDPSEGVALSASILQYLKDRVNL 456
            SLEQNLSTFSGHISRICKILE+ S +SLVLIDEIG GTDPSEGVALSASILQYLKDRVNL
Sbjct: 482  SLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLKDRVNL 541

Query: 455  AVVTTHYADLSCLKETDSRVENAAMEFCLETLQPTYRILWRCVGNSNALTIAKSIGFDQK 276
            AVVTTHYADLS +KE D+R +NAAMEF LETLQPTYRILW C G+SNAL+IA+SIGFD+ 
Sbjct: 542  AVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQSIGFDRN 601

Query: 275  VLDHAHKWVEKLRPDKQIERKSMLYHSLMEERNTLEAQDRQAVTLHSEIMKLYHEIQDEA 96
            ++D A KWVEK +P++Q ER+ MLY SL EERN L+AQ  +A ++H+EIM +Y+EIQ EA
Sbjct: 602  IIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVYNEIQGEA 661

Query: 95   EDLDRREAALKAKDTQQVLQELKAARAKID 6
            EDLD+RE  L AK+TQQV  EL+ A+++I+
Sbjct: 662  EDLDQREMELMAKETQQVQHELEHAKSQIE 691


>ref|XP_003637393.1| MutS2 family protein [Medicago truncatula]
            gi|355503328|gb|AES84531.1| MutS2 family protein
            [Medicago truncatula]
          Length = 913

 Score =  445 bits (1145), Expect = e-123
 Identities = 226/330 (68%), Positives = 270/330 (81%), Gaps = 12/330 (3%)
 Frame = -1

Query: 959  SVDIEGIRHPVLLESFLRSSSSD------------RGNGIMHSKRLSEGEYDLPVPIDIK 816
            +V+IEG+RHP+LLES L + S +             GNG M SK  S+G  D PVP+D K
Sbjct: 360  TVNIEGMRHPLLLESSLENISDNVTLRSGNAAELGNGNGTMASKSASQGITDFPVPVDFK 419

Query: 815  IDHGTKVVVISGPNTGGKTASMKTLGLASIMSKAGLYLPAKGRPRLPWFDLILADIGDHQ 636
            I  GT+VVVISGPNTGGKTASMKTLGLAS+MSKAG++LPAK  P+LPWFDLIL DIGDHQ
Sbjct: 420  IRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILVDIGDHQ 479

Query: 635  SLEQNLSTFSGHISRICKILELGSKESLVLIDEIGSGTDPSEGVALSASILQYLKDRVNL 456
            SLEQNLSTFSGHISRI K LE+ SK+SLVLIDEIGSGTDPSEGVALSASILQYL++ VNL
Sbjct: 480  SLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQYLREHVNL 539

Query: 455  AVVTTHYADLSCLKETDSRVENAAMEFCLETLQPTYRILWRCVGNSNALTIAKSIGFDQK 276
            AVVTTHYADLS +KE D+  ENAAMEF LETLQPTYR+LW C G+SNAL+IA+SIGFD+ 
Sbjct: 540  AVVTTHYADLSTMKEKDTCFENAAMEFSLETLQPTYRVLWGCTGDSNALSIAQSIGFDKN 599

Query: 275  VLDHAHKWVEKLRPDKQIERKSMLYHSLMEERNTLEAQDRQAVTLHSEIMKLYHEIQDEA 96
            ++DHA KWVEKL+P++Q ER+ MLY SL EE+N L+AQ  +A ++H+EIM +Y EIQ EA
Sbjct: 600  IIDHAQKWVEKLKPEQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIMNVYSEIQGEA 659

Query: 95   EDLDRREAALKAKDTQQVLQELKAARAKID 6
            EDLDRRE  L AK+ QQV QEL+ A+++++
Sbjct: 660  EDLDRRETMLMAKEAQQVQQELEDAKSQME 689


>ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|222848769|gb|EEE86316.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score =  435 bits (1118), Expect = e-120
 Identities = 224/329 (68%), Positives = 263/329 (79%), Gaps = 11/329 (3%)
 Frame = -1

Query: 959  SVDIEGIRHPVLLESFLRSSSSDRGNGIMHSKRLSEGEY-----------DLPVPIDIKI 813
            S+DIEGIRHP+L  +  +  S+  G+  ++S  + E              + PVPI+IK+
Sbjct: 363  SIDIEGIRHPLLNGTSRKRLSNILGSNSLNSMEVDEDSMLDTGKPSKNVSEFPVPINIKV 422

Query: 812  DHGTKVVVISGPNTGGKTASMKTLGLASIMSKAGLYLPAKGRPRLPWFDLILADIGDHQS 633
            + GT+VVVISGPNTGGKTASMKTLG+AS+MSKAGLYLPAK  P+LPWFD +LADIGDHQS
Sbjct: 423  ECGTRVVVISGPNTGGKTASMKTLGVASLMSKAGLYLPAKNTPKLPWFDFVLADIGDHQS 482

Query: 632  LEQNLSTFSGHISRICKILELGSKESLVLIDEIGSGTDPSEGVALSASILQYLKDRVNLA 453
            LEQNLSTFSGHISRICKILE+ S ESLVL+DEI SGTDPSEGVALS SIL YL+D VNLA
Sbjct: 483  LEQNLSTFSGHISRICKILEVASNESLVLVDEICSGTDPSEGVALSTSILHYLRDHVNLA 542

Query: 452  VVTTHYADLSCLKETDSRVENAAMEFCLETLQPTYRILWRCVGNSNALTIAKSIGFDQKV 273
            VVTTHYADLS LK+ DSR ENAAMEF LETLQPTY+ILW C G+SNAL+IAKSIGFD  +
Sbjct: 543  VVTTHYADLSLLKDKDSRFENAAMEFSLETLQPTYQILWGCTGDSNALSIAKSIGFDSNI 602

Query: 272  LDHAHKWVEKLRPDKQIERKSMLYHSLMEERNTLEAQDRQAVTLHSEIMKLYHEIQDEAE 93
            ++ A KWVEKL P+KQ ER  MLY SL+EERN LEAQ R+  +LH+EIM+LYHEIQ E+E
Sbjct: 603  IERARKWVEKLVPEKQQERSGMLYQSLLEERNRLEAQARKGASLHTEIMELYHEIQAESE 662

Query: 92   DLDRREAALKAKDTQQVLQELKAARAKID 6
            DLD R  AL AK+TQ V  ELKAA ++I+
Sbjct: 663  DLDGRVKALMAKETQLVQLELKAANSQIE 691


>ref|XP_002519048.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
            gi|223541711|gb|EEF43259.1| DNA mismatch repair protein
            muts2, putative [Ricinus communis]
          Length = 873

 Score =  426 bits (1095), Expect = e-117
 Identities = 218/318 (68%), Positives = 261/318 (82%)
 Frame = -1

Query: 959  SVDIEGIRHPVLLESFLRSSSSDRGNGIMHSKRLSEGEYDLPVPIDIKIDHGTKVVVISG 780
            S+DIEGI+HP+LL S                      +   PVPI+IK++ GT+VVVISG
Sbjct: 362  SIDIEGIQHPLLLGS---------------------SQQKFPVPINIKVECGTRVVVISG 400

Query: 779  PNTGGKTASMKTLGLASIMSKAGLYLPAKGRPRLPWFDLILADIGDHQSLEQNLSTFSGH 600
            PNTGGKTASMKTLG+AS+MSKAGL+LPA+  P++PWFD++LADIGD+QSLEQNLSTFSGH
Sbjct: 401  PNTGGKTASMKTLGIASLMSKAGLFLPARNTPKIPWFDVVLADIGDNQSLEQNLSTFSGH 460

Query: 599  ISRICKILELGSKESLVLIDEIGSGTDPSEGVALSASILQYLKDRVNLAVVTTHYADLSC 420
            ISRICKILE+ SKESLVLIDEI SGTDPSEGVALS SILQYL+DRVNLAVVTTHYADLS 
Sbjct: 461  ISRICKILEVTSKESLVLIDEICSGTDPSEGVALSTSILQYLRDRVNLAVVTTHYADLSL 520

Query: 419  LKETDSRVENAAMEFCLETLQPTYRILWRCVGNSNALTIAKSIGFDQKVLDHAHKWVEKL 240
            LK++DS+ ENAAMEF LETLQPTY+ILW   GNSNAL+IAKSIGFD  +++ A KWVEKL
Sbjct: 521  LKDSDSQFENAAMEFSLETLQPTYQILWGSTGNSNALSIAKSIGFDSNIIERAEKWVEKL 580

Query: 239  RPDKQIERKSMLYHSLMEERNTLEAQDRQAVTLHSEIMKLYHEIQDEAEDLDRREAALKA 60
             P+KQ  RK +LY SLM+ERN LEAQ R+A ++H++IM+LY+EIQDEA +LD R  AL A
Sbjct: 581  IPEKQQHRKGLLYKSLMDERNKLEAQAREAASVHAQIMELYYEIQDEAGNLDSRIMALMA 640

Query: 59   KDTQQVLQELKAARAKID 6
            K+TQQV QELKA +++I+
Sbjct: 641  KETQQVQQELKATKSQIE 658