BLASTX nr result

ID: Cimicifuga21_contig00026975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026975
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17322.3| unnamed protein product [Vitis vinifera]              310   3e-82
ref|XP_002266835.1| PREDICTED: transcription factor FAMA [Vitis ...   310   3e-82
ref|XP_003520153.1| PREDICTED: transcription factor FAMA-like [G...   298   8e-79
ref|XP_003516270.1| PREDICTED: uncharacterized protein LOC100813...   296   5e-78
ref|XP_002518108.1| DNA binding protein, putative [Ricinus commu...   270   4e-70

>emb|CBI17322.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  310 bits (794), Expect = 3e-82
 Identities = 170/247 (68%), Positives = 191/247 (77%), Gaps = 1/247 (0%)
 Frame = +2

Query: 2   SMQLGFLGGSLQKNPSTETKNRRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEHLRVL 181
           S+QL FLG +LQKN   + KN+RKRPR++KT+EEVESQRMTHIAVERNRRKQMNEHLRVL
Sbjct: 126 SVQLQFLGENLQKNTVMDAKNKRKRPRTIKTSEEVESQRMTHIAVERNRRKQMNEHLRVL 185

Query: 182 RSLMPGSYVQRGDQASIIGGAIEFVRXXXXXXXXXXXXKRRRLYGNGEPPRPIGDXXXXX 361
           RSLMP SYVQRGDQASIIGGAIEFVR            KRRRL+G+   PR +GD     
Sbjct: 186 RSLMPSSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLFGDA--PRQMGDSSSLA 243

Query: 362 XXXXXXXXXXXXXXX-NEQIKLADYDTGLLEDMAENKSCFADVEVKVLGFDALIKILSRR 538
                           N+QI   ++ TGL E+ AENKSC ADVEV++LGFDA+IKILSRR
Sbjct: 244 IQQPQQPPFFPPLPLPNDQI---NFGTGLREETAENKSCLADVEVRLLGFDAMIKILSRR 300

Query: 539 RPGQLIKAIEALEDLQFNILHTNITTIEQTVLYSFNVKVANESRYTAEDIASSVQQIFSF 718
           RPGQLIK I ALEDLQ NILHTNITTIEQTVLYSFNVK+A+ESR+TAEDIASSVQQI SF
Sbjct: 301 RPGQLIKTIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQILSF 360

Query: 719 IHATSTI 739
           IHA S+I
Sbjct: 361 IHANSSI 367


>ref|XP_002266835.1| PREDICTED: transcription factor FAMA [Vitis vinifera]
          Length = 400

 Score =  310 bits (794), Expect = 3e-82
 Identities = 170/247 (68%), Positives = 191/247 (77%), Gaps = 1/247 (0%)
 Frame = +2

Query: 2   SMQLGFLGGSLQKNPSTETKNRRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEHLRVL 181
           S+QL FLG +LQKN   + KN+RKRPR++KT+EEVESQRMTHIAVERNRRKQMNEHLRVL
Sbjct: 159 SVQLQFLGENLQKNTVMDAKNKRKRPRTIKTSEEVESQRMTHIAVERNRRKQMNEHLRVL 218

Query: 182 RSLMPGSYVQRGDQASIIGGAIEFVRXXXXXXXXXXXXKRRRLYGNGEPPRPIGDXXXXX 361
           RSLMP SYVQRGDQASIIGGAIEFVR            KRRRL+G+   PR +GD     
Sbjct: 219 RSLMPSSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLFGDA--PRQMGDSSSLA 276

Query: 362 XXXXXXXXXXXXXXX-NEQIKLADYDTGLLEDMAENKSCFADVEVKVLGFDALIKILSRR 538
                           N+QI   ++ TGL E+ AENKSC ADVEV++LGFDA+IKILSRR
Sbjct: 277 IQQPQQPPFFPPLPLPNDQI---NFGTGLREETAENKSCLADVEVRLLGFDAMIKILSRR 333

Query: 539 RPGQLIKAIEALEDLQFNILHTNITTIEQTVLYSFNVKVANESRYTAEDIASSVQQIFSF 718
           RPGQLIK I ALEDLQ NILHTNITTIEQTVLYSFNVK+A+ESR+TAEDIASSVQQI SF
Sbjct: 334 RPGQLIKTIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQILSF 393

Query: 719 IHATSTI 739
           IHA S+I
Sbjct: 394 IHANSSI 400


>ref|XP_003520153.1| PREDICTED: transcription factor FAMA-like [Glycine max]
          Length = 430

 Score =  298 bits (764), Expect = 8e-79
 Identities = 168/250 (67%), Positives = 190/250 (76%), Gaps = 4/250 (1%)
 Frame = +2

Query: 2   SMQLGFLGGS--LQKNPST-ETKN-RRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEH 169
           S+Q+ FLG     QKN +  E KN ++KRPR+VKT+EEVESQRMTHIAVERNRRKQMNEH
Sbjct: 182 SVQIRFLGHEEPQQKNCAVQENKNGKKKRPRTVKTSEEVESQRMTHIAVERNRRKQMNEH 241

Query: 170 LRVLRSLMPGSYVQRGDQASIIGGAIEFVRXXXXXXXXXXXXKRRRLYGNGEPPRPIGDX 349
           LRVLRSLMPGSYVQRGDQASIIGGAIEFVR            KRRRL G  +  R +GD 
Sbjct: 242 LRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAQA-RQVGDP 300

Query: 350 XXXXXXXXXXXXXXXXXXXNEQIKLADYDTGLLEDMAENKSCFADVEVKVLGFDALIKIL 529
                              NEQ+KL + +TGL E+ AE KSC ADVEVK+LGFDA+IKIL
Sbjct: 301 SLVAQQQQQPPFFPTLPIPNEQMKLVEMETGLREETAECKSCLADVEVKLLGFDAMIKIL 360

Query: 530 SRRRPGQLIKAIEALEDLQFNILHTNITTIEQTVLYSFNVKVANESRYTAEDIASSVQQI 709
           SRRRPGQLIK I ALEDLQ  ILHTNITTIEQTVLYSFNVKVA++SR+TAEDIASSVQQI
Sbjct: 361 SRRRPGQLIKTIAALEDLQLIILHTNITTIEQTVLYSFNVKVASDSRFTAEDIASSVQQI 420

Query: 710 FSFIHATSTI 739
           F+FIHA +++
Sbjct: 421 FNFIHANTSM 430


>ref|XP_003516270.1| PREDICTED: uncharacterized protein LOC100813515 [Glycine max]
          Length = 811

 Score =  296 bits (757), Expect = 5e-78
 Identities = 169/251 (67%), Positives = 190/251 (75%), Gaps = 5/251 (1%)
 Frame = +2

Query: 2    SMQLGFLGGS--LQKNPST--ETKN-RRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNE 166
            S+Q+ FLG     QKN     E KN +RKRPR+VKT+EEVESQRMTHIAVERNRRKQMNE
Sbjct: 564  SVQIRFLGHEEPQQKNNCAVQENKNGKRKRPRTVKTSEEVESQRMTHIAVERNRRKQMNE 623

Query: 167  HLRVLRSLMPGSYVQRGDQASIIGGAIEFVRXXXXXXXXXXXXKRRRLYGNGEPPRPIGD 346
            HLRVLRSLMPGSYVQRGDQASIIGGAIEFVR            KRRRL G  +  R +GD
Sbjct: 624  HLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAQA-RQVGD 682

Query: 347  XXXXXXXXXXXXXXXXXXXXNEQIKLADYDTGLLEDMAENKSCFADVEVKVLGFDALIKI 526
                                NEQ+KL + +TGL E+ AE+KSC ADVEVK+LGFDA+IKI
Sbjct: 683  PSLATQQQPPFFPPLPIP--NEQMKLVEMETGLHEETAESKSCLADVEVKLLGFDAMIKI 740

Query: 527  LSRRRPGQLIKAIEALEDLQFNILHTNITTIEQTVLYSFNVKVANESRYTAEDIASSVQQ 706
            LSRRRPGQLIK I ALEDLQ  ILHTNITTIEQTVLYSFNVKVA++SR+TAEDIASSVQQ
Sbjct: 741  LSRRRPGQLIKTIAALEDLQLIILHTNITTIEQTVLYSFNVKVASDSRFTAEDIASSVQQ 800

Query: 707  IFSFIHATSTI 739
            IF+FIHA +++
Sbjct: 801  IFNFIHANTSM 811


>ref|XP_002518108.1| DNA binding protein, putative [Ricinus communis]
           gi|223542704|gb|EEF44241.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 411

 Score =  270 bits (689), Expect = 4e-70
 Identities = 151/248 (60%), Positives = 176/248 (70%), Gaps = 2/248 (0%)
 Frame = +2

Query: 2   SMQLGFLGG--SLQKNPSTETKNRRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEHLR 175
           S+QL FL    +  KNP  E KN+RKRPR+ KT+EEVESQRMTHIAVERNRRKQMNEHLR
Sbjct: 167 SVQLQFLENQDAQNKNPIPEVKNKRKRPRTTKTSEEVESQRMTHIAVERNRRKQMNEHLR 226

Query: 176 VLRSLMPGSYVQRGDQASIIGGAIEFVRXXXXXXXXXXXXKRRRLYGNGEPPRPIGDXXX 355
           VLRSLMPGSYVQRGDQASIIGGAIEFVR            KRRRLYG+    +  G+   
Sbjct: 227 VLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLYGDAASRQMAGE--- 283

Query: 356 XXXXXXXXXXXXXXXXXNEQIKLADYDTGLLEDMAENKSCFADVEVKVLGFDALIKILSR 535
                            N+Q+KL  ++TGL E+ AENKSC ADVEVK+LGFDA+IKILSR
Sbjct: 284 -SSVAVQQPQSPFFPLPNDQMKLVQFETGLREETAENKSCLADVEVKLLGFDAMIKILSR 342

Query: 536 RRPGQLIKAIEALEDLQFNILHTNITTIEQTVLYSFNVKVANESRYTAEDIASSVQQIFS 715
           RRPGQLIK I ALEDLQ NILHTNITTIEQTVLYSFNVK  N  +  +++  S+     +
Sbjct: 343 RRPGQLIKTIAALEDLQLNILHTNITTIEQTVLYSFNVKY-NHVKVNSQEPISTFLTHSA 401

Query: 716 FIHATSTI 739
            ++ TS++
Sbjct: 402 SVNCTSSL 409


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