BLASTX nr result

ID: Cimicifuga21_contig00026892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026892
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282533.1| PREDICTED: uncharacterized protein LOC100254...   134   8e-30
emb|CAN62766.1| hypothetical protein VITISV_021816 [Vitis vinifera]   132   4e-29
ref|XP_002528756.1| conserved hypothetical protein [Ricinus comm...   131   5e-29
ref|XP_002323428.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_002308476.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27

>ref|XP_002282533.1| PREDICTED: uncharacterized protein LOC100254636 [Vitis vinifera]
          Length = 160

 Score =  134 bits (337), Expect = 8e-30
 Identities = 73/131 (55%), Positives = 93/131 (70%), Gaps = 3/131 (2%)
 Frame = +1

Query: 31  MGNCLVLEGKLVKVMKVDGKILEYQTPLKVHQVLSEFTGHAISDSLPVHRHLCPDTNMLS 210
           MGNCL  + K++K+M+ DGK+LEY+TPLKV QVLSEF+G AISD+LPV +HL  D  M+ 
Sbjct: 1   MGNCLAQQEKIIKIMRPDGKVLEYKTPLKVQQVLSEFSGCAISDTLPVIQHLRKDMEMVG 60

Query: 211 GRXXXXXXXXXXSNDADKSTMAQKE---ESKQGTGVVRIKLVITKQELKEMLAKGGVLSL 381
           G+          S + +K  +   +   E+ QGTGVVRI+LVITKQELKEML KGGV S+
Sbjct: 61  GQLYYLIPVPLPSPEVEKKALRFSDPQVEADQGTGVVRIRLVITKQELKEMLRKGGV-SV 119

Query: 382 DEMMSQLQNKQ 414
           D M+SQLQ  Q
Sbjct: 120 DHMVSQLQRGQ 130


>emb|CAN62766.1| hypothetical protein VITISV_021816 [Vitis vinifera]
          Length = 193

 Score =  132 bits (331), Expect = 4e-29
 Identities = 72/131 (54%), Positives = 92/131 (70%), Gaps = 3/131 (2%)
 Frame = +1

Query: 31  MGNCLVLEGKLVKVMKVDGKILEYQTPLKVHQVLSEFTGHAISDSLPVHRHLCPDTNMLS 210
           MGNCL  + K++K+M+ DGK+LEY+TPLKV QVLSEF+G AISD+LPV +HL  D  M+ 
Sbjct: 1   MGNCLAQQEKIIKIMRPDGKVLEYKTPLKVQQVLSEFSGCAISDTLPVIQHLRKDMEMVG 60

Query: 211 GRXXXXXXXXXXSNDADKSTMAQKE---ESKQGTGVVRIKLVITKQELKEMLAKGGVLSL 381
           G+          S + +K  +   +   E+  GTGVVRI+LVITKQELKEML KGGV S+
Sbjct: 61  GQLYYLIPVPLPSPEVEKKALRFSDPQVEADXGTGVVRIRLVITKQELKEMLRKGGV-SV 119

Query: 382 DEMMSQLQNKQ 414
           D M+SQLQ  Q
Sbjct: 120 DHMVSQLQRGQ 130


>ref|XP_002528756.1| conserved hypothetical protein [Ricinus communis]
           gi|223531850|gb|EEF33668.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  131 bits (330), Expect = 5e-29
 Identities = 73/130 (56%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
 Frame = +1

Query: 31  MGNCLVLEGKLVKVMKVDGKILEYQTPLKVHQVLSEFTGHAISDSLPVHRHLCPDTNMLS 210
           MGNC+VL+ K+VKVMK DGKILEY+ P++V QVLSEF+GHAISDSL   +HL PDT +  
Sbjct: 1   MGNCIVLQEKVVKVMKPDGKILEYRAPVRVQQVLSEFSGHAISDSLQDFQHLLPDTKLHG 60

Query: 211 GRXXXXXXXXXXSNDADKST--MAQKEESKQGTGVVRIKLVITKQELKEMLAKGGVLSLD 384
           G           S +  K       +EE+K+ TG VRIKLVI+KQEL+E+L KGGV S+D
Sbjct: 61  GSLYYLVALPLPSPEVKKKVRFSIPEEENKKETGAVRIKLVISKQELQEILRKGGV-SVD 119

Query: 385 EMMSQLQNKQ 414
            M+SQLQ +Q
Sbjct: 120 YMISQLQGQQ 129


>ref|XP_002323428.1| predicted protein [Populus trichocarpa] gi|222868058|gb|EEF05189.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  125 bits (314), Expect = 4e-27
 Identities = 71/134 (52%), Positives = 91/134 (67%), Gaps = 6/134 (4%)
 Frame = +1

Query: 31  MGNCLVLEGKLVKVMKVDGKILEYQTPLKVHQVLSEFTGHAISDSLPVHRHLCPDTNMLS 210
           MGNCLVL+G ++K+MK DGKILEYQ P+KV QVLS+F  HAI+DSL   ++L PDTN+L 
Sbjct: 1   MGNCLVLQGNVIKIMKSDGKILEYQAPIKVQQVLSDFCDHAIADSLQAFQYLSPDTNLLG 60

Query: 211 GRXXXXXXXXXXSNDADKS---TMAQKEESK---QGTGVVRIKLVITKQELKEMLAKGGV 372
           G           S    K    ++ + +E K   + T VVRIKLVI+KQEL EML KGGV
Sbjct: 61  GHLYYLVPLQLPSPAKKKKVRFSIPEDQEVKDVQEKTSVVRIKLVISKQELVEMLRKGGV 120

Query: 373 LSLDEMMSQLQNKQ 414
            S+D+M+SQL  +Q
Sbjct: 121 -SVDDMVSQLHGQQ 133


>ref|XP_002308476.1| predicted protein [Populus trichocarpa] gi|222854452|gb|EEE91999.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  124 bits (311), Expect = 8e-27
 Identities = 69/136 (50%), Positives = 91/136 (66%), Gaps = 8/136 (5%)
 Frame = +1

Query: 31  MGNCLVLEGKLVKVMKVDGKILEYQTPLKVHQVLSEFTGHAISDSLPVHRHLCPDTNMLS 210
           MGNCLVL+  ++KVMK DGKILEYQ P+KV QVLS+F+GHAI+DSL   +HL PDT++L 
Sbjct: 1   MGNCLVLQANVIKVMKPDGKILEYQAPIKVQQVLSDFSGHAIADSLQAFQHLPPDTSLLG 60

Query: 211 GRXXXXXXXXXXSNDADKSTMAQ--------KEESKQGTGVVRIKLVITKQELKEMLAKG 366
           G            +   K    +        K+  ++ + VVRIKLVI+KQEL+EML KG
Sbjct: 61  GDHLYYLVPLQLPSPQAKKKKVRFSIPEEEAKDVQEKTSTVVRIKLVISKQELQEMLRKG 120

Query: 367 GVLSLDEMMSQLQNKQ 414
           GV S+D+M+S LQ +Q
Sbjct: 121 GV-SVDDMVSHLQGQQ 135


Top