BLASTX nr result

ID: Cimicifuga21_contig00026872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026872
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...    40   5e-06

>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 40.4 bits (93), Expect(2) = 5e-06
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = +3

Query: 852 EETSWRQISRTKFYQDGQANTEFFHALANFRRRRNN 959
           +E+ W Q SR K+ + G  NT+FFH +A+ R+ RN+
Sbjct: 334 KESYWSQQSRIKWLKQGDRNTKFFHVVASIRKHRNS 369



 Score = 36.6 bits (83), Expect(2) = 5e-06
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +2

Query: 602 CWIS--RCT*RLMKQ*NKSSISLGVXXXXXXXXXXXXMWNKEVFGRVDQKIEEIVARIDE 775
           CW+S  RC  RL+K   + S  +G+             WN++VFG ++  I+++   I++
Sbjct: 244 CWLSDPRCM-RLVKDTWQKSSPMGLVQKLKTVKKDLKDWNEKVFGNIEANIKQLEHEINQ 302

Query: 776 LDK 784
           LDK
Sbjct: 303 LDK 305


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