BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026849
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19489.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [...   159   3e-37
dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]           157   6e-37
ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula...   157   8e-37
emb|CAJ38367.1| polyA-binding protein [Plantago major]                156   1e-36

>emb|CBI19489.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  159 bits (401), Expect = 3e-37
 Identities = 81/101 (80%), Positives = 86/101 (85%)
 Frame = +3

Query: 3   TSCKVMRDPSGISRGSGFVAFSTSEEANRALTEMNGKMVASKPLYVALAQRKEDRRARLQ 182
           TSCKVMRDPSGISRGSGFVAFSTSEEA+RALTEMNGKMV SKPLYVALAQRKE+RRARLQ
Sbjct: 327 TSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQ 386

Query: 183 AQFSQMRPVAMPPNVAHRXXXXXXXXXXXXQQIFYGQGPPA 305
           AQFSQMRPV+M P+VA R            QQ+FYGQGPPA
Sbjct: 387 AQFSQMRPVSMAPSVAPRMPMYPPGAPGLGQQLFYGQGPPA 427



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/58 (43%), Positives = 35/58 (60%)
 Frame = +3

Query: 6   SCKVMRDPSGISRGSGFVAFSTSEEANRALTEMNGKMVASKPLYVALAQRKEDRRARL 179
           SCK+  DPSG S+G GFV F   E A  A+ ++NG ++  K +YV    RK++R   L
Sbjct: 134 SCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFLRKQERETAL 191


>ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|147773643|emb|CAN76464.1| hypothetical protein
           VITISV_017035 [Vitis vinifera]
          Length = 640

 Score =  159 bits (401), Expect = 3e-37
 Identities = 81/101 (80%), Positives = 86/101 (85%)
 Frame = +3

Query: 3   TSCKVMRDPSGISRGSGFVAFSTSEEANRALTEMNGKMVASKPLYVALAQRKEDRRARLQ 182
           TSCKVMRDPSGISRGSGFVAFSTSEEA+RALTEMNGKMV SKPLYVALAQRKE+RRARLQ
Sbjct: 327 TSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQ 386

Query: 183 AQFSQMRPVAMPPNVAHRXXXXXXXXXXXXQQIFYGQGPPA 305
           AQFSQMRPV+M P+VA R            QQ+FYGQGPPA
Sbjct: 387 AQFSQMRPVSMAPSVAPRMPMYPPGAPGLGQQLFYGQGPPA 427



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/58 (43%), Positives = 35/58 (60%)
 Frame = +3

Query: 6   SCKVMRDPSGISRGSGFVAFSTSEEANRALTEMNGKMVASKPLYVALAQRKEDRRARL 179
           SCK+  DPSG S+G GFV F   E A  A+ ++NG ++  K +YV    RK++R   L
Sbjct: 134 SCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFLRKQERETAL 191


>dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
          Length = 657

 Score =  157 bits (398), Expect = 6e-37
 Identities = 78/101 (77%), Positives = 87/101 (86%)
 Frame = +3

Query: 3   TSCKVMRDPSGISRGSGFVAFSTSEEANRALTEMNGKMVASKPLYVALAQRKEDRRARLQ 182
           TSCKVMRDPSGISRGSGFVAFSTSEEA+RAL+EMNGKM+ SKPLYVALAQRKE+RRA+LQ
Sbjct: 347 TSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQRKEERRAKLQ 406

Query: 183 AQFSQMRPVAMPPNVAHRXXXXXXXXXXXXQQIFYGQGPPA 305
           AQFSQ+RPVAMPP++A R            QQ+FYGQGPPA
Sbjct: 407 AQFSQLRPVAMPPSLAPRMPIYPPGAPGIGQQLFYGQGPPA 447



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/65 (43%), Positives = 40/65 (61%)
 Frame = +3

Query: 3   TSCKVMRDPSGISRGSGFVAFSTSEEANRALTEMNGKMVASKPLYVALAQRKEDRRARLQ 182
           TS  VMRD  G S+  GF+ F T+E+A +A+  +NGK    K  YV  AQ+K +R   L+
Sbjct: 244 TSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSEREQELK 303

Query: 183 AQFSQ 197
           ++F Q
Sbjct: 304 SKFEQ 308


>ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
           gi|355508977|gb|AES90119.1| Poly(A)-binding protein
           [Medicago truncatula]
          Length = 654

 Score =  157 bits (397), Expect = 8e-37
 Identities = 79/101 (78%), Positives = 85/101 (84%)
 Frame = +3

Query: 3   TSCKVMRDPSGISRGSGFVAFSTSEEANRALTEMNGKMVASKPLYVALAQRKEDRRARLQ 182
           TSCKVMRDP+G+SRGSGFVAFST EEA+RAL EMNGKMVASKPLYV LAQRKEDRRARLQ
Sbjct: 343 TSCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQRKEDRRARLQ 402

Query: 183 AQFSQMRPVAMPPNVAHRXXXXXXXXXXXXQQIFYGQGPPA 305
           AQF+QMRPV+MPP+VA R            QQIFYGQGPPA
Sbjct: 403 AQFAQMRPVSMPPSVAPRMPMYPPGGPGMGQQIFYGQGPPA 443



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/65 (43%), Positives = 40/65 (61%)
 Frame = +3

Query: 3   TSCKVMRDPSGISRGSGFVAFSTSEEANRALTEMNGKMVASKPLYVALAQRKEDRRARLQ 182
           TS  VMRD  G S+  GFV F ++++A RA+  +NGK +  K  YV  AQ+K +R   L+
Sbjct: 240 TSAVVMRDGDGKSKCFGFVNFESTDDAARAVEALNGKKIDDKEWYVGKAQKKSEREHELK 299

Query: 183 AQFSQ 197
            +F Q
Sbjct: 300 IKFEQ 304


>emb|CAJ38367.1| polyA-binding protein [Plantago major]
          Length = 314

 Score =  156 bits (395), Expect = 1e-36
 Identities = 79/101 (78%), Positives = 85/101 (84%)
 Frame = +3

Query: 3   TSCKVMRDPSGISRGSGFVAFSTSEEANRALTEMNGKMVASKPLYVALAQRKEDRRARLQ 182
           TSCKVMRDPSGISRGSGFVAFST EE+ RAL+EMNGKMV SKPLYVALAQRKE+RRARLQ
Sbjct: 3   TSCKVMRDPSGISRGSGFVAFSTPEESARALSEMNGKMVISKPLYVALAQRKEERRARLQ 62

Query: 183 AQFSQMRPVAMPPNVAHRXXXXXXXXXXXXQQIFYGQGPPA 305
           AQFSQMRPVAMPP++A R            QQ+FYGQGPPA
Sbjct: 63  AQFSQMRPVAMPPSIAPRMPMYPPGAPGIGQQLFYGQGPPA 103