BLASTX nr result

ID: Cimicifuga21_contig00026845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026845
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]    45   5e-09
emb|CAN72914.1| hypothetical protein VITISV_034007 [Vitis vinifera]    45   3e-08
emb|CAN79044.1| hypothetical protein VITISV_043757 [Vitis vinifera]    46   6e-08
emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera]    40   6e-07
emb|CAN62611.1| hypothetical protein VITISV_033248 [Vitis vinifera]    40   8e-07

>emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]
          Length = 971

 Score = 44.7 bits (104), Expect(2) = 5e-09
 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 9/52 (17%)
 Frame = +2

Query: 44  GLMCKIDLTKDYDEVKWNFMDRVMRE---------WIKRCVLSTSLSGLITG 172
           G++CK+D+ K YD+V WNF+  +M++         WI+ C+ + S S +I G
Sbjct: 330 GILCKLDIEKAYDKVDWNFILTIMKKMGFGEKWIRWIQWCISTASFSVMING 381



 Score = 40.4 bits (93), Expect(2) = 5e-09
 Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
 Frame = +1

Query: 178 TGFFRSSRSIRQGDPF*SPNIFAI-H*CFGTTLGRANDLG*L------WASE*GM*LVRV 336
           TGFF+SSR +RQGDP  SP +F I    F   + RA +   L        SE G     V
Sbjct: 384 TGFFQSSRGLRQGDPL-SPYLFVIAKEVFTVFIKRAVEGDFLSGCRVKGRSEEG-----V 437

Query: 337 LVSHFLFAVDTVVF 378
           ++SH LFA DT+VF
Sbjct: 438 IISHLLFADDTLVF 451


>emb|CAN72914.1| hypothetical protein VITISV_034007 [Vitis vinifera]
          Length = 1586

 Score = 45.4 bits (106), Expect(2) = 3e-08
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 9/52 (17%)
 Frame = +2

Query: 44  GLMCKIDLTKDYDEVKWNFMDRVMRE---------WIKRCVLSTSLSGLITG 172
           G MCK+D+ K YD V W+F+  VM++         WIK C+ + S S LI G
Sbjct: 324 GFMCKLDIEKAYDNVDWSFLLTVMQKMGFXEKWIGWIKWCISTASFSVLING 375



 Score = 37.0 bits (84), Expect(2) = 3e-08
 Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
 Frame = +1

Query: 181 GFFRSSRSIRQGDPF*SPNIFAI-H*CFGTTLGRANDLG*L-WASE*GM*LVRVLVSHFL 354
           G F+SSR +RQGDP  SP +F I    F + L R  D G +   +  G     V +SH L
Sbjct: 379 GCFQSSRGLRQGDPL-SPYLFVIAMEVFSSFLKRVVDGGFMSGCTVKGRNGEGVQISHLL 437

Query: 355 FAVDTVVF 378
           FA DT+VF
Sbjct: 438 FADDTLVF 445


>emb|CAN79044.1| hypothetical protein VITISV_043757 [Vitis vinifera]
          Length = 1256

 Score = 46.2 bits (108), Expect(2) = 6e-08
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 9/52 (17%)
 Frame = +2

Query: 44   GLMCKIDLTKDYDEVKWNFMDRVMR---------EWIKRCVLSTSLSGLITG 172
            GL+CK+D+ K YD + WNF+ +V+          EWI  C+ +T  S L+ G
Sbjct: 1021 GLVCKLDIEKAYDSINWNFLMKVLHKMGFGSRWMEWILWCISTTKFSVLVNG 1072



 Score = 35.4 bits (80), Expect(2) = 6e-08
 Identities = 24/66 (36%), Positives = 32/66 (48%)
 Frame = +1

Query: 181  GFFRSSRSIRQGDPF*SPNIFAIH*CFGTTLGRANDLG*LWASE*GM*LVRVLVSHFLFA 360
            GFF +S+ +RQGDP  SP +F         LGR                + + VSH LFA
Sbjct: 1076 GFFSNSKGLRQGDPI-SPYLF--------VLGRGG--------------MEMNVSHLLFA 1112

Query: 361  VDTVVF 378
             DT++F
Sbjct: 1113 DDTIIF 1118


>emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera]
          Length = 3028

 Score = 40.4 bits (93), Expect(2) = 6e-07
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
 Frame = +2

Query: 44   GLMCKIDLTKDYDEVKWNFMDRVMRE---------WIKRCVLSTSLSGLITG 172
            G++CK+DL K YD + W+F+  V++          WI  C+ + + S LI G
Sbjct: 2434 GVLCKLDLEKAYDHINWDFLIFVLQSMGFGEKWIGWISWCISTATFSVLING 2485



 Score = 37.7 bits (86), Expect(2) = 6e-07
 Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +1

Query: 181  GFFRSSRSIRQGDPF*SPNIFAI-H*CFGTTLGRANDLG*LWASE-*GM*LVRVLVSHFL 354
            G+F SSR +RQGDP  SP +F I        + RA   G L      G     VLVSH L
Sbjct: 2489 GYFNSSRGLRQGDPL-SPYLFVIGMEALSRLINRAVGGGFLSGCRVDGRGGNGVLVSHLL 2547

Query: 355  FAVDTVVF 378
            FA DT+VF
Sbjct: 2548 FADDTLVF 2555


>emb|CAN62611.1| hypothetical protein VITISV_033248 [Vitis vinifera]
          Length = 954

 Score = 40.4 bits (93), Expect(2) = 8e-07
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 9/50 (18%)
 Frame = +2

Query: 44  GLMCKIDLTKDYDEVKWNFMDRVMRE---------WIKRCVLSTSLSGLI 166
           G++CK+D+ K YD + WNF+  V+R          WI  C+ + + S LI
Sbjct: 712 GVLCKLDIEKAYDHLNWNFLLSVLRRMGFGERWIGWISWCISTATFSVLI 761



 Score = 37.4 bits (85), Expect(2) = 8e-07
 Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +1

Query: 181 GFFRSSRSIRQGDPF*SPNIFAI-H*CFGTTLGRANDLG*LWASE-*GM*LVRVLVSHFL 354
           GFF  SR +RQGDP  SP +F I    F   + RA   G L   +  G      LVSH L
Sbjct: 767 GFFNKSRXLRQGDPL-SPYLFVIGMEAFSRLIHRAMRGGFLSGCKINGRRGDGTLVSHLL 825

Query: 355 FAVDTVVF 378
           FA DT+VF
Sbjct: 826 FADDTLVF 833


Top