BLASTX nr result

ID: Cimicifuga21_contig00026844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026844
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519306.1| nucleic acid binding protein, putative [Rici...    64   1e-08
gb|AFK45800.1| unknown [Lotus japonicus]                               64   2e-08
ref|XP_002312298.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_003631686.1| PREDICTED: uncharacterized protein LOC100259...    62   6e-08
emb|CBI22430.3| unnamed protein product [Vitis vinifera]               62   6e-08

>ref|XP_002519306.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223541621|gb|EEF43170.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 455

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/55 (49%), Positives = 40/55 (72%)
 Frame = +1

Query: 76  KLVVYPEGNAKMNVKDHLSLSLAIADAKSLPVDWVVNTTFRIFLFDQVRGKYMTI 240
           KLV+YP+GN   NV +HLSL +A+AD+ +L + W V+  FR+FL DQ+R  Y+ +
Sbjct: 199 KLVLYPKGNKSKNVMEHLSLYIAMADSSNLQLGWEVHVVFRLFLLDQIRDNYLIL 253


>gb|AFK45800.1| unknown [Lotus japonicus]
          Length = 154

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = +1

Query: 76  KLVVYPEGNAKMNVKDHLSLSLAIADAKSLPVDWVVNTTFRIFLFDQVRGKYMTI 240
           +L++YP GN K N   H+SL LAIAD   LP  W VN  F++F+FDQ    Y+TI
Sbjct: 64  RLILYPSGNHKSNGSGHVSLYLAIADTDDLPEGWEVNVNFKLFVFDQKNNNYLTI 118


>ref|XP_002312298.1| predicted protein [Populus trichocarpa] gi|222852118|gb|EEE89665.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = +1

Query: 76  KLVVYPEGNAKMNVKDHLSLSLAIADAKSLPVDWVVNTTFRIFLFDQVRGKYM 234
           KLV+YP GN   NVKD++SL LA  DA SLP+ W V+  FR+FL DQ +  Y+
Sbjct: 57  KLVLYPSGNKSRNVKDYISLYLAKVDASSLPLGWEVHVIFRLFLLDQNKDSYL 109


>ref|XP_003631686.1| PREDICTED: uncharacterized protein LOC100259955 isoform 2 [Vitis
           vinifera]
          Length = 314

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/55 (45%), Positives = 38/55 (69%)
 Frame = +1

Query: 76  KLVVYPEGNAKMNVKDHLSLSLAIADAKSLPVDWVVNTTFRIFLFDQVRGKYMTI 240
           +L +YP GN K   +DH+SL L I+DA+ LPV W V   F++F+F+ +  KY+T+
Sbjct: 52  RLCLYPNGNKKSGGEDHISLYLEISDAQKLPVGWEVTVNFKLFVFNHIHEKYLTV 106


>emb|CBI22430.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/55 (45%), Positives = 38/55 (69%)
 Frame = +1

Query: 76  KLVVYPEGNAKMNVKDHLSLSLAIADAKSLPVDWVVNTTFRIFLFDQVRGKYMTI 240
           +L +YP GN K   +DH+SL L I+DA+ LPV W V   F++F+F+ +  KY+T+
Sbjct: 410 RLCLYPNGNKKSGGEDHISLYLEISDAQKLPVGWEVTVNFKLFVFNHIHEKYLTV 464



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 22/54 (40%), Positives = 38/54 (70%)
 Frame = +1

Query: 79  LVVYPEGNAKMNVKDHLSLSLAIADAKSLPVDWVVNTTFRIFLFDQVRGKYMTI 240
           L +YP GN K + + H+SL L I++A++LP+ W V   F++F+F+ +  KY+T+
Sbjct: 69  LCIYPNGNKKSDGEGHISLYLEISEAQNLPLGWEVTVNFKLFVFNHIHEKYLTV 122


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