BLASTX nr result

ID: Cimicifuga21_contig00026817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026817
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]   205   5e-51
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi...   191   6e-47
ref|NP_001183023.1| uncharacterized protein LOC100501345 [Zea ma...   187   1e-45
gb|EEE62043.1| hypothetical protein OsJ_16825 [Oryza sativa Japo...   187   1e-45
gb|EAY96238.1| hypothetical protein OsI_18133 [Oryza sativa Indi...   183   2e-44

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score =  205 bits (521), Expect = 5e-51
 Identities = 99/172 (57%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
 Frame = -2

Query: 532  ILPDEITFIGVLCACARGELLSDGKNYFNQMSSVYNITPKFAHYWCMANLYYGAGLVQEA 353
            ++PDEITFIGVLCACAR  LL++G++Y++QM + ++I P FAHYWCMANL+ G GLVQEA
Sbjct: 719  LJPDEITFIGVLCACAREGLLAEGRSYYSQMINTFHIKPNFAHYWCMANLFAGVGLVQEA 778

Query: 352  EEVLRSMP-EDEGXXXXXXXXXXXXXSCRFRGDIKLGEQITMRLIELEPQNGSHYSLLLN 176
            EE+LRSMP EDE              SCRF+G + LGE+I   LIE EPQN S+Y LLLN
Sbjct: 779  EEILRSMPEEDEDLSWESSFWAGLLSSCRFQGXVFLGERIATYLIESEPQNISYYRLLLN 838

Query: 175  IYAAAGRWEEAAEVKTMMEEKGVGQTCGSSLVDLNEMVHEFAVGDRLQPGMD 20
            +YA AGRWE+ A VK M++E+G+ Q  G +L DL E+VHEF +G++ Q GM+
Sbjct: 839  VYAVAGRWEDVARVKEMVKERGIKQMPGCNLADLKEIVHEFKLGEKWQQGME 890


>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 575

 Score =  191 bits (486), Expect = 6e-47
 Identities = 90/176 (51%), Positives = 120/176 (68%), Gaps = 1/176 (0%)
 Frame = -2

Query: 541 KEVILPDEITFIGVLCACARGELLSDGKNYFNQMSSVYNITPKFAHYWCMANLYYGAGLV 362
           K  + PD+ITFIGVLCACAR  LL D +NYF++M +V+ + P F HYWC+AN+Y   GL+
Sbjct: 394 KRKVFPDQITFIGVLCACARAGLLKDAENYFDEMINVFLVRPNFGHYWCLANVYVAVGLI 453

Query: 361 QEAEEVLRSMPED-EGXXXXXXXXXXXXXSCRFRGDIKLGEQITMRLIELEPQNGSHYSL 185
           ++A E+LR+MPED E              +CRF GD+ LGEQI   LI++EP+N S+Y L
Sbjct: 454 EQAVEILRNMPEDNEDFSSESVVWIDLLTTCRFVGDVSLGEQIAKYLIDMEPKNDSYYRL 513

Query: 184 LLNIYAAAGRWEEAAEVKTMMEEKGVGQTCGSSLVDLNEMVHEFAVGDRLQPGMDE 17
           LLNIYA AGRWE+ + +K +M+EK +G   G  LVDL E+VH   +G+ LQ  M E
Sbjct: 514 LLNIYAVAGRWEDVSRIKLLMKEKRLGTMSGCRLVDLKEIVHSLKLGNHLQERMKE 569


>ref|NP_001183023.1| uncharacterized protein LOC100501345 [Zea mays]
           gi|238008826|gb|ACR35448.1| unknown [Zea mays]
          Length = 361

 Score =  187 bits (475), Expect = 1e-45
 Identities = 94/177 (53%), Positives = 121/177 (68%)
 Frame = -2

Query: 532 ILPDEITFIGVLCACARGELLSDGKNYFNQMSSVYNITPKFAHYWCMANLYYGAGLVQEA 353
           + PD +TFIGVLCACAR  LL DGK YF QM++ YN  P F+HYWCMANLY   GL++EA
Sbjct: 171 VQPDGVTFIGVLCACARLGLLEDGKAYFEQMNTTYNFKPTFSHYWCMANLYGSVGLLEEA 230

Query: 352 EEVLRSMPEDEGXXXXXXXXXXXXXSCRFRGDIKLGEQITMRLIELEPQNGSHYSLLLNI 173
           E +L+++PED                CRFR D +LGE+I +RLIELEP N +HY+LL N+
Sbjct: 231 EGLLQNIPED----LKARALGGLLGLCRFRRDWRLGERIALRLIELEPSNNAHYALLCNV 286

Query: 172 YAAAGRWEEAAEVKTMMEEKGVGQTCGSSLVDLNEMVHEFAVGDRLQPGMDEVYIML 2
           YAAAGRWEE   VK +M+E+    + G  LV+LNE+V EF + +R QP   E+Y +L
Sbjct: 287 YAAAGRWEEVHRVKAIMKERDERFSPGHRLVNLNEIVDEFKIRER-QPENQEIYFIL 342


>gb|EEE62043.1| hypothetical protein OsJ_16825 [Oryza sativa Japonica Group]
          Length = 553

 Score =  187 bits (475), Expect = 1e-45
 Identities = 94/177 (53%), Positives = 121/177 (68%)
 Frame = -2

Query: 532 ILPDEITFIGVLCACARGELLSDGKNYFNQMSSVYNITPKFAHYWCMANLYYGAGLVQEA 353
           +LPDE+TFIGVLCAC R  LL DGK YF QMS++YNI P FAHYWCMANLY   GL++EA
Sbjct: 362 LLPDEVTFIGVLCACTRLALLDDGKAYFEQMSTMYNIKPTFAHYWCMANLYASVGLLEEA 421

Query: 352 EEVLRSMPEDEGXXXXXXXXXXXXXSCRFRGDIKLGEQITMRLIELEPQNGSHYSLLLNI 173
           E +L SMPE+                CRFRG+ +LGE+I +RLIELEP N  HY+LL N+
Sbjct: 422 EGLLTSMPEE----LKAHALGGLLGLCRFRGEWELGERIVLRLIELEPNNSVHYALLCNV 477

Query: 172 YAAAGRWEEAAEVKTMMEEKGVGQTCGSSLVDLNEMVHEFAVGDRLQPGMDEVYIML 2
           YA+AGRWE+   VK +++E+    + G  LV+LNE++H+F      QP   E+Y +L
Sbjct: 478 YASAGRWEDVHRVKAIIKERDEKLSPGHRLVNLNEILHQFR---ERQPENQEIYGIL 531


>gb|EAY96238.1| hypothetical protein OsI_18133 [Oryza sativa Indica Group]
          Length = 357

 Score =  183 bits (464), Expect = 2e-44
 Identities = 93/179 (51%), Positives = 121/179 (67%)
 Frame = -2

Query: 538 EVILPDEITFIGVLCACARGELLSDGKNYFNQMSSVYNITPKFAHYWCMANLYYGAGLVQ 359
           ++I  DE+TFIGVLCAC R  LL DGK YF QMS++YNI P FAHYWCMANLY   GL++
Sbjct: 164 DMIGQDEVTFIGVLCACTRLALLDDGKAYFEQMSTMYNIKPTFAHYWCMANLYASVGLLE 223

Query: 358 EAEEVLRSMPEDEGXXXXXXXXXXXXXSCRFRGDIKLGEQITMRLIELEPQNGSHYSLLL 179
           EAE +L SMPE+                CRFRG+ +LGE+I +RLIELEP N  HY+LL 
Sbjct: 224 EAEGLLTSMPEE----LKAHALGGLLGLCRFRGEWELGERIVLRLIELEPSNSVHYALLC 279

Query: 178 NIYAAAGRWEEAAEVKTMMEEKGVGQTCGSSLVDLNEMVHEFAVGDRLQPGMDEVYIML 2
           N+YA+AGRWE+   VK +++E+    + G  LV+LNE++H+F      QP   E+Y +L
Sbjct: 280 NVYASAGRWEDVHRVKAIIKERDEKLSPGHRLVNLNEILHQFR---ERQPENQEIYGIL 335


Top