BLASTX nr result

ID: Cimicifuga21_contig00026799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026799
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57...    65   7e-09
ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycin...    64   1e-08
gb|AFK44646.1| unknown [Medicago truncatula]                           62   4e-08
gb|ACJ85554.1| unknown [Medicago truncatula]                           62   4e-08

>ref|XP_003542610.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Glycine max]
          Length = 376

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/95 (37%), Positives = 49/95 (51%)
 Frame = -1

Query: 302 WSTLPEHLLDLIVQRLSLPDRFRFGCVCKPWRSVCGLLQFQNHHPLLMMVPRPTRTTSSE 123
           WS LP  LL+LI+ RLSL D  R   VCK W SV   +   N  P LM  P+       +
Sbjct: 36  WSDLPTELLELILSRLSLDDNVRASVVCKRWHSVATSVCVVNQSPWLMYFPK-----FGD 90

Query: 122 DFGFYSLCDGKVYEADIPELSNRQICGSNFGFWMM 18
            + FY     K Y  ++PELS  ++C +  G W++
Sbjct: 91  WYEFYDPVHRKTYSIELPELSGSRVCYTKDG-WLL 124


>ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|222842402|gb|EEE79949.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
 Frame = -1

Query: 308 TRWSTLPEHLLDLIVQR-LSLPDRFRFGCVCKPWRSVCGLLQFQNHHPLLMMVP---RPT 141
           +RWS LP  LL LI Q+  +  D      VCK WRS       +  H LL  +P    P 
Sbjct: 2   SRWSDLPPELLQLITQKQTNYVDYLCVRAVCKSWRSALP----KKPHDLLCQLPWLLLPY 57

Query: 140 RTTSSEDFGFYSLCDGKVYEADIPELSNRQICGSNFGFWMM 18
           +  S    GFY+L DGK Y  ++PE   ++ CGS+ G+ +M
Sbjct: 58  QNDSPNHRGFYNLADGKTYRLELPEAYEKRCCGSSHGWLVM 98


>ref|NP_001241212.1| uncharacterized protein LOC100809651 [Glycine max]
           gi|255641457|gb|ACU21004.1| unknown [Glycine max]
          Length = 376

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/108 (35%), Positives = 54/108 (50%)
 Frame = -1

Query: 341 IPFELRLLPMETRWSTLPEHLLDLIVQRLSLPDRFRFGCVCKPWRSVCGLLQFQNHHPLL 162
           +  E   L ++T WS LP  LL+LI+ RLSL D  R   VCK W SV   +   N  P L
Sbjct: 24  VEVENEYLELQT-WSDLPTELLELILSRLSLDDNVRASVVCKRWHSVATSVCVVNQSPWL 82

Query: 161 MMVPRPTRTTSSEDFGFYSLCDGKVYEADIPELSNRQICGSNFGFWMM 18
           M  P+       + + FY     K Y  ++PEL   ++C +  G W++
Sbjct: 83  MYFPK-----FGDWYEFYDPAHRKTYSIELPELRGSRVCYTKDG-WLL 124


>gb|AFK44646.1| unknown [Medicago truncatula]
          Length = 376

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/95 (32%), Positives = 48/95 (50%)
 Frame = -1

Query: 302 WSTLPEHLLDLIVQRLSLPDRFRFGCVCKPWRSVCGLLQFQNHHPLLMMVPRPTRTTSSE 123
           W+ LP  LL++I+ RL+L D  R   VCK W  V   ++  N  P LM  P+       +
Sbjct: 36  WADLPAELLEMIISRLALEDNVRASAVCKSWNFVANAVRMVNQSPWLMYFPK-----FGQ 90

Query: 122 DFGFYSLCDGKVYEADIPELSNRQICGSNFGFWMM 18
            + FY     K Y  + PEL+  ++C +  G W++
Sbjct: 91  WYEFYDPVQRKTYSIEFPELNGSRVCYTKDG-WLL 124


>gb|ACJ85554.1| unknown [Medicago truncatula]
          Length = 220

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/95 (32%), Positives = 48/95 (50%)
 Frame = -1

Query: 302 WSTLPEHLLDLIVQRLSLPDRFRFGCVCKPWRSVCGLLQFQNHHPLLMMVPRPTRTTSSE 123
           W+ LP  LL++I+ RL+L D  R   VCK W  V   ++  N  P LM  P+       +
Sbjct: 36  WADLPAELLEMIISRLALEDNVRASAVCKSWNFVANAVRMVNQSPWLMYFPK-----FGQ 90

Query: 122 DFGFYSLCDGKVYEADIPELSNRQICGSNFGFWMM 18
            + FY     K Y  + PEL+  ++C +  G W++
Sbjct: 91  WYEFYDPVQRKTYSIEFPELNGSRVCYTKDG-WLL 124


Top