BLASTX nr result

ID: Cimicifuga21_contig00026773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026773
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329305.1| predicted protein [Populus trichocarpa] gi|2...    70   7e-10
emb|CAN73732.1| hypothetical protein VITISV_022576 [Vitis vinifera]    69   1e-09
emb|CBI16901.3| unnamed protein product [Vitis vinifera]               68   3e-09
ref|XP_002329304.1| predicted protein [Populus trichocarpa] gi|2...    68   3e-09
ref|XP_002305310.1| predicted protein [Populus trichocarpa] gi|2...    67   8e-09

>ref|XP_002329305.1| predicted protein [Populus trichocarpa] gi|222870759|gb|EEF07890.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = -1

Query: 826 WRWNSPXXXXXXXXXXXXXXXAFSLLVLACSHRKYPDDISSPDDDM-ENPVKRALSQPEF 650
           W WNSP                 +L++LACS+RK   + S  + ++ E P K+   Q +F
Sbjct: 19  WHWNSPVAYVFVGLALMLGLITVALIILACSYRKSLSNSSRREAELDEKPAKQVEIQVDF 78

Query: 649 EPKILVVMAGNSEPTYLAKPVSSVYNIQQQA 557
           EPK++V+MAG+  PTYLAKPVS    I ++A
Sbjct: 79  EPKVVVIMAGDENPTYLAKPVSCNCKIGEKA 109


>emb|CAN73732.1| hypothetical protein VITISV_022576 [Vitis vinifera]
          Length = 101

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 33/87 (37%), Positives = 50/87 (57%)
 Frame = -1

Query: 847 NSMTNESWRWNSPXXXXXXXXXXXXXXXAFSLLVLACSHRKYPDDISSPDDDMENPVKRA 668
           +S ++E WRWNSP                 +L++L+CSH+K     SSPD   + P K  
Sbjct: 6   SSSSSEIWRWNSPFPYLFGGFALILGLIVVALIILSCSHKKRT---SSPDHVKDKPPKTI 62

Query: 667 LSQPEFEPKILVVMAGNSEPTYLAKPV 587
            ++P+  P+++V+MAG+  PTYLA PV
Sbjct: 63  CTEPDTLPRVIVIMAGDENPTYLATPV 89


>emb|CBI16901.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 32/90 (35%), Positives = 51/90 (56%)
 Frame = -1

Query: 847 NSMTNESWRWNSPXXXXXXXXXXXXXXXAFSLLVLACSHRKYPDDISSPDDDMENPVKRA 668
           +S ++E WRWNS                  +L++L+CSH+K      SPD D + P K  
Sbjct: 6   SSSSSEIWRWNSLLPYLFGGLALIIGLIVVALIILSCSHKKRTP---SPDHDKDKPAKTI 62

Query: 667 LSQPEFEPKILVVMAGNSEPTYLAKPVSSV 578
            ++P+  P+++V+MAG+  PTYLA PV ++
Sbjct: 63  CTEPDTLPRVVVIMAGDENPTYLATPVPAL 92


>ref|XP_002329304.1| predicted protein [Populus trichocarpa] gi|222870758|gb|EEF07889.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 36/98 (36%), Positives = 47/98 (47%)
 Frame = -1

Query: 877 MDVVTPASTINSMTNESWRWNSPXXXXXXXXXXXXXXXAFSLLVLACSHRKYPDDISSPD 698
           M   T ++ ++      W WNSP                 +L++LACS+RK     S  D
Sbjct: 1   MRSATNSTAVDGTHGGFWHWNSPVVYFFVGLAFMLGLITVALIILACSYRKSLSSSSRSD 60

Query: 697 DDMENPVKRALSQPEFEPKILVVMAGNSEPTYLAKPVS 584
              E P K    Q + EPKI V+MAG+  PTYL KPVS
Sbjct: 61  AGDEKPAKHEEIQVDLEPKIAVIMAGDENPTYLLKPVS 98


>ref|XP_002305310.1| predicted protein [Populus trichocarpa] gi|222848274|gb|EEE85821.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 34/81 (41%), Positives = 44/81 (54%)
 Frame = -1

Query: 826 WRWNSPXXXXXXXXXXXXXXXAFSLLVLACSHRKYPDDISSPDDDMENPVKRALSQPEFE 647
           W WNSP                 SL++LACS  K   + S+ + + E   K+   Q EFE
Sbjct: 18  WHWNSPVAYVFVGLAFMLGLITVSLIILACSSGKSLSNSSTSEAEDEKSAKQVEIQVEFE 77

Query: 646 PKILVVMAGNSEPTYLAKPVS 584
           P I+V+MAG+  PTYLAKPVS
Sbjct: 78  PNIVVIMAGDDNPTYLAKPVS 98


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