BLASTX nr result
ID: Cimicifuga21_contig00026768
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00026768
(629 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31329.3| unnamed protein product [Vitis vinifera] 194 1e-48
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi... 194 1e-48
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera] 194 2e-48
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,... 191 7e-47
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2... 191 9e-47
>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 194 bits (492), Expect(2) = 1e-48
Identities = 100/169 (59%), Positives = 124/169 (73%), Gaps = 6/169 (3%)
Frame = +1
Query: 1 VTYTSLIAGLGMQGEGQAAVRLFEEMNERGIKPDHVAMVAALSACSHSGLVFEGQMMFEK 180
+TYTS+IAG GMQGEGQAA++LFEEMN IKPDH+ M+A LSACSHSGLV +GQ++FEK
Sbjct: 461 MTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEK 520
Query: 181 MINIYRINPQVEHFACMVDLYGTAGLLRKAARIIIEMPFQPTHAMLATLIRACRIHGNTT 360
M ++Y + P +EHFACM DL+G AGLL KA II MP++PT AM ATLI ACRIH NT
Sbjct: 521 MRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTE 580
Query: 361 IKEWAT-KFLEMRPEE*IYCDLFAKFWQ-----SKLAEFRKLVKIVGIR 489
I EWA K LEM+PE Y L A + +KLA+ R ++ +G+R
Sbjct: 581 IGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVR 629
Score = 25.0 bits (53), Expect(2) = 1e-48
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 515 FLVPDGSNQHLRKIYLFLKMLTGRMKE 595
FLV D SN + +IY L+ LT MKE
Sbjct: 646 FLVDDTSNANADEIYPLLEGLTMVMKE 672
>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like
[Vitis vinifera]
Length = 748
Score = 194 bits (492), Expect(2) = 1e-48
Identities = 100/169 (59%), Positives = 124/169 (73%), Gaps = 6/169 (3%)
Frame = +1
Query: 1 VTYTSLIAGLGMQGEGQAAVRLFEEMNERGIKPDHVAMVAALSACSHSGLVFEGQMMFEK 180
+TYTS+IAG GMQGEGQAA++LFEEMN IKPDH+ M+A LSACSHSGLV +GQ++FEK
Sbjct: 506 MTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEK 565
Query: 181 MINIYRINPQVEHFACMVDLYGTAGLLRKAARIIIEMPFQPTHAMLATLIRACRIHGNTT 360
M ++Y + P +EHFACM DL+G AGLL KA II MP++PT AM ATLI ACRIH NT
Sbjct: 566 MRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTE 625
Query: 361 IKEWAT-KFLEMRPEE*IYCDLFAKFWQ-----SKLAEFRKLVKIVGIR 489
I EWA K LEM+PE Y L A + +KLA+ R ++ +G+R
Sbjct: 626 IGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVR 674
Score = 25.0 bits (53), Expect(2) = 1e-48
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 515 FLVPDGSNQHLRKIYLFLKMLTGRMKE 595
FLV D SN + +IY L+ LT MKE
Sbjct: 691 FLVDDTSNANADEIYPLLEGLTMVMKE 717
>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 194 bits (494), Expect(2) = 2e-48
Identities = 100/169 (59%), Positives = 124/169 (73%), Gaps = 6/169 (3%)
Frame = +1
Query: 1 VTYTSLIAGLGMQGEGQAAVRLFEEMNERGIKPDHVAMVAALSACSHSGLVFEGQMMFEK 180
+TYTS+IAG GMQGEGQAA++LFEEMN IKPDH+ M+A LSACSHSGLV +GQ++FEK
Sbjct: 580 MTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEK 639
Query: 181 MINIYRINPQVEHFACMVDLYGTAGLLRKAARIIIEMPFQPTHAMLATLIRACRIHGNTT 360
M ++Y + P +EHFACM DL+G AGLL KA II MP++PT AM ATLI ACRIH NT
Sbjct: 640 MRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTE 699
Query: 361 IKEWAT-KFLEMRPEE*IYCDLFAKFWQ-----SKLAEFRKLVKIVGIR 489
I EWA K LEM+PE Y L A + +KLA+ R ++ +G+R
Sbjct: 700 IGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVR 748
Score = 23.5 bits (49), Expect(2) = 2e-48
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 515 FLVPDGSNQHLRKIYLFLKMLTGRMKE 595
FLV D SN + +IY L+ LT +KE
Sbjct: 765 FLVDDTSNANADEIYPLLEGLTMVIKE 791
>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 730
Score = 191 bits (486), Expect = 7e-47
Identities = 107/202 (52%), Positives = 134/202 (66%), Gaps = 6/202 (2%)
Frame = +1
Query: 1 VTYTSLIAGLGMQGEGQAAVRLFEEMNERGIKPDHVAMVAALSACSHSGLVFEGQMMFEK 180
VTYTSLIAG G+QGEG+ A++LF+EM +R IKPDHV MVA LSACSHSGLV EG +FE
Sbjct: 499 VTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFEL 558
Query: 181 MINIYRINPQVEHFACMVDLYGTAGLLRKAARIIIEMPFQPTHAMLATLIRACRIHGNTT 360
M + Y I P++EHFACMVDL+G AGLL KA +I MP++P+ AM ATL+ ACRIHGN
Sbjct: 559 MPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAE 618
Query: 361 IKEWAT-KFLEMRPEE*IYCDLFAKFWQ-----SKLAEFRKLVKIVGIRNFMSIWGSVSC 522
I EWA K LEMRPE Y L A + SKLA+ R ++ +G+R + C
Sbjct: 619 IGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRK------APGC 672
Query: 523 SGWIKSTSAKDIFVFEDVDWPH 588
+ W+ S F+ +D PH
Sbjct: 673 A-WVDVGSGFFPFLVDDTSKPH 693
>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
predicted protein [Populus trichocarpa]
Length = 683
Score = 191 bits (485), Expect = 9e-47
Identities = 102/170 (60%), Positives = 123/170 (72%), Gaps = 7/170 (4%)
Frame = +1
Query: 1 VTYTSLIAGLGMQGEGQAAVRLFEEMNERGIKPDHVAMVAALSACSHSGLVFEGQMMFEK 180
VTYTSLIAG G+QGEG+ A++LF+EM + IKPD V MVA LSACSHSGLV EG ++FEK
Sbjct: 448 VTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEK 507
Query: 181 MINIYRINPQVEHFACMVDLYGTAGLLRKAARIIIEMPFQPTHAMLATLIRACRIHGNTT 360
M +Y I P VEHF+CMVDL+G AGLL KA ++I MP++PT AM ATL+ ACRIHGNT
Sbjct: 508 MSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTE 567
Query: 361 IKEWAT-KFLEMRPEE*IYCDLFAKF------WQSKLAEFRKLVKIVGIR 489
I EWA K LEM+PE Y L A W SKLAE R ++ +G+R
Sbjct: 568 IGEWAAEKLLEMKPENPGYYVLIANMHAAAGRW-SKLAEVRTYMRDLGVR 616