BLASTX nr result
ID: Cimicifuga21_contig00026765
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00026765 (304 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2... 90 2e-16 ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 87 2e-15 emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera] 87 2e-15 ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containi... 86 3e-15 ref|XP_002533788.1| pentatricopeptide repeat-containing protein,... 85 5e-15 >ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1| predicted protein [Populus trichocarpa] Length = 701 Score = 90.1 bits (222), Expect = 2e-16 Identities = 40/56 (71%), Positives = 45/56 (80%) Frame = -1 Query: 298 YMKRNRMFTDKWKYKSEFLKYHRYLYRSLKAEKTKTEAQRKRLEHVRAFRKWVGID 131 YMK M+ DKW YK EFLK H+ LYRSLKA + +TEAQ KRLEHV+AFRKWVGID Sbjct: 646 YMKERNMYCDKWMYKDEFLKLHKNLYRSLKASEARTEAQSKRLEHVKAFRKWVGID 701 >ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g17616-like, partial [Vitis vinifera] Length = 457 Score = 86.7 bits (213), Expect = 2e-15 Identities = 38/56 (67%), Positives = 45/56 (80%) Frame = -1 Query: 298 YMKRNRMFTDKWKYKSEFLKYHRYLYRSLKAEKTKTEAQRKRLEHVRAFRKWVGID 131 +MK M+ DKW YKSEFLK+H+ LYR+LKA T+TEAQ KRLE+V AFRKW GID Sbjct: 402 HMKEQNMYCDKWMYKSEFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKWAGID 457 >emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera] Length = 854 Score = 86.7 bits (213), Expect = 2e-15 Identities = 38/56 (67%), Positives = 45/56 (80%) Frame = -1 Query: 298 YMKRNRMFTDKWKYKSEFLKYHRYLYRSLKAEKTKTEAQRKRLEHVRAFRKWVGID 131 +MK M+ DKW YKSEFLK+H+ LYR+LKA T+TEAQ KRLE+V AFRKW GID Sbjct: 799 HMKEQNMYCDKWMYKSEFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKWAGID 854 >ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein At4g17616-like [Glycine max] Length = 684 Score = 85.9 bits (211), Expect = 3e-15 Identities = 37/58 (63%), Positives = 47/58 (81%) Frame = -1 Query: 304 LEYMKRNRMFTDKWKYKSEFLKYHRYLYRSLKAEKTKTEAQRKRLEHVRAFRKWVGID 131 + +M+ + M+ DKW YK+EFL+ H+ LYRSLKA T+TEAQ KRLEHV+ FRKWVGID Sbjct: 627 ISHMRDHNMYPDKWMYKNEFLRLHKNLYRSLKASNTRTEAQSKRLEHVQEFRKWVGID 684 >ref|XP_002533788.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223526289|gb|EEF28601.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 689 Score = 85.1 bits (209), Expect = 5e-15 Identities = 38/56 (67%), Positives = 44/56 (78%) Frame = -1 Query: 298 YMKRNRMFTDKWKYKSEFLKYHRYLYRSLKAEKTKTEAQRKRLEHVRAFRKWVGID 131 YMK +M+TDKW YKSEFLK H+ LY+ LKA T+ E QRKRLE V+ FRKWVGID Sbjct: 634 YMKECKMYTDKWMYKSEFLKLHKNLYKCLKASDTRNEVQRKRLEFVQTFRKWVGID 689