BLASTX nr result

ID: Cimicifuga21_contig00026765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026765
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    87   2e-15
emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]    87   2e-15
ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15
ref|XP_002533788.1| pentatricopeptide repeat-containing protein,...    85   5e-15

>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/56 (71%), Positives = 45/56 (80%)
 Frame = -1

Query: 298 YMKRNRMFTDKWKYKSEFLKYHRYLYRSLKAEKTKTEAQRKRLEHVRAFRKWVGID 131
           YMK   M+ DKW YK EFLK H+ LYRSLKA + +TEAQ KRLEHV+AFRKWVGID
Sbjct: 646 YMKERNMYCDKWMYKDEFLKLHKNLYRSLKASEARTEAQSKRLEHVKAFRKWVGID 701


>ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g17616-like, partial [Vitis vinifera]
          Length = 457

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = -1

Query: 298 YMKRNRMFTDKWKYKSEFLKYHRYLYRSLKAEKTKTEAQRKRLEHVRAFRKWVGID 131
           +MK   M+ DKW YKSEFLK+H+ LYR+LKA  T+TEAQ KRLE+V AFRKW GID
Sbjct: 402 HMKEQNMYCDKWMYKSEFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKWAGID 457


>emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]
          Length = 854

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = -1

Query: 298 YMKRNRMFTDKWKYKSEFLKYHRYLYRSLKAEKTKTEAQRKRLEHVRAFRKWVGID 131
           +MK   M+ DKW YKSEFLK+H+ LYR+LKA  T+TEAQ KRLE+V AFRKW GID
Sbjct: 799 HMKEQNMYCDKWMYKSEFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKWAGID 854


>ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g17616-like [Glycine max]
          Length = 684

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 37/58 (63%), Positives = 47/58 (81%)
 Frame = -1

Query: 304 LEYMKRNRMFTDKWKYKSEFLKYHRYLYRSLKAEKTKTEAQRKRLEHVRAFRKWVGID 131
           + +M+ + M+ DKW YK+EFL+ H+ LYRSLKA  T+TEAQ KRLEHV+ FRKWVGID
Sbjct: 627 ISHMRDHNMYPDKWMYKNEFLRLHKNLYRSLKASNTRTEAQSKRLEHVQEFRKWVGID 684


>ref|XP_002533788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526289|gb|EEF28601.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 689

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = -1

Query: 298 YMKRNRMFTDKWKYKSEFLKYHRYLYRSLKAEKTKTEAQRKRLEHVRAFRKWVGID 131
           YMK  +M+TDKW YKSEFLK H+ LY+ LKA  T+ E QRKRLE V+ FRKWVGID
Sbjct: 634 YMKECKMYTDKWMYKSEFLKLHKNLYKCLKASDTRNEVQRKRLEFVQTFRKWVGID 689


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