BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026733
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16226.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   133   2e-29
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   112   2e-23
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   105   4e-21
ref|XP_004166766.1| PREDICTED: DNA-directed RNA polymerase III s...    97   1e-18

>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/102 (62%), Positives = 79/102 (77%)
 Frame = +3

Query: 6   VLNPVRVLALFKKMLDEDCELLYLSDRPEKLIITDXXXXXXXXXXXXFMDGGEHSNENDI 185
           +LNPV+VL+LFK+M+DEDC+LL L++RPEKL++T+            FMDGG  SNEND+
Sbjct: 219 ILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDV 278

Query: 186 TSKLKLIIQANASLRQDLQCTGSRSKCLVDWELLQIEVAQYI 311
           T +LK IIQANASL Q+LQ TGS SKCL  W+ LQIEVAQYI
Sbjct: 279 TERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYI 320


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
           vinifera]
          Length = 1383

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/102 (62%), Positives = 79/102 (77%)
 Frame = +3

Query: 6   VLNPVRVLALFKKMLDEDCELLYLSDRPEKLIITDXXXXXXXXXXXXFMDGGEHSNENDI 185
           +LNPV+VL+LFK+M+DEDC+LL L++RPEKL++T+            FMDGG  SNEND+
Sbjct: 219 ILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDV 278

Query: 186 TSKLKLIIQANASLRQDLQCTGSRSKCLVDWELLQIEVAQYI 311
           T +LK IIQANASL Q+LQ TGS SKCL  W+ LQIEVAQYI
Sbjct: 279 TERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYI 320


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Cucumis sativus]
          Length = 1400

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/102 (56%), Positives = 73/102 (71%)
 Frame = +3

Query: 6   VLNPVRVLALFKKMLDEDCELLYLSDRPEKLIITDXXXXXXXXXXXXFMDGGEHSNENDI 185
           +LNP RVL LF++M DEDCELL+LS+RPEKLIIT+             MDG + SNENDI
Sbjct: 216 ILNPFRVLCLFQRMSDEDCELLFLSNRPEKLIITNVLVPPIAIRPSVIMDGSQ-SNENDI 274

Query: 186 TSKLKLIIQANASLRQDLQCTGSRSKCLVDWELLQIEVAQYI 311
           T +LK IIQ NAS+ Q+L  + S++KCL  W++LQ EVAQ I
Sbjct: 275 TERLKRIIQQNASVSQELSTSNSQAKCLESWDMLQSEVAQLI 316


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Glycine max]
          Length = 1391

 Score =  105 bits (262), Expect = 4e-21
 Identities = 58/102 (56%), Positives = 73/102 (71%)
 Frame = +3

Query: 6   VLNPVRVLALFKKMLDEDCELLYLSDRPEKLIITDXXXXXXXXXXXXFMDGGEHSNENDI 185
           +LNP +VL+LFK+MLDEDCELLY+++RPEKLI+T+             MD    SNENDI
Sbjct: 219 ILNPFQVLSLFKRMLDEDCELLYVAERPEKLIMTNVVVPPIAIRPSVVMD-ESLSNENDI 277

Query: 186 TSKLKLIIQANASLRQDLQCTGSRSKCLVDWELLQIEVAQYI 311
           T +LK IIQANA LRQ+LQ +   SK L  W++LQ EVAQ+I
Sbjct: 278 TERLKNIIQANAVLRQELQESTFSSKFLDGWDILQNEVAQFI 319


>ref|XP_004166766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like,
           partial [Cucumis sativus]
          Length = 286

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/88 (56%), Positives = 63/88 (71%)
 Frame = +3

Query: 6   VLNPVRVLALFKKMLDEDCELLYLSDRPEKLIITDXXXXXXXXXXXXFMDGGEHSNENDI 185
           +LNP RVL LF++M DEDCELL+LS+RPEKLIIT+             MDG + SNENDI
Sbjct: 200 ILNPFRVLCLFQRMSDEDCELLFLSNRPEKLIITNVLVPPIAIRPSVIMDGSQ-SNENDI 258

Query: 186 TSKLKLIIQANASLRQDLQCTGSRSKCL 269
           T +LK IIQ NAS+ Q+L  + S++KCL
Sbjct: 259 TERLKRIIQQNASVSQELSTSNSQAKCL 286