BLASTX nr result

ID: Cimicifuga21_contig00026707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026707
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263519.1| PREDICTED: uncharacterized membrane protein ...   217   7e-55
emb|CAN71954.1| hypothetical protein VITISV_024312 [Vitis vinifera]   217   7e-55
ref|XP_002301410.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|XP_002876638.1| hypothetical protein ARALYDRAFT_907735 [Arab...   213   1e-53
emb|CAB71107.1| putative protein [Arabidopsis thaliana]               212   2e-53

>ref|XP_002263519.1| PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera]
           gi|297745470|emb|CBI40550.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  217 bits (553), Expect = 7e-55
 Identities = 104/128 (81%), Positives = 112/128 (87%)
 Frame = +1

Query: 1   SMKIVLNFFVERRWDFRILFASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLI 180
           S+K+VLNFFVER+WD RI+FASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLI
Sbjct: 123 SVKVVLNFFVERKWDLRIMFASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLI 182

Query: 181 VMYDAIGVRRHAGMQAEVLNMIIADLFQGHPISQRKLKELLGHTPSQXXXXXXXXXXXXC 360
           VMYDA GVRRHAGMQAEVLNMI+ DLF+GHPISQRKLKE+LGHTPSQ            C
Sbjct: 183 VMYDATGVRRHAGMQAEVLNMIVEDLFKGHPISQRKLKEILGHTPSQVLAGAVLGIVIAC 242

Query: 361 ICCRGSLV 384
           ICC+G LV
Sbjct: 243 ICCQGCLV 250


>emb|CAN71954.1| hypothetical protein VITISV_024312 [Vitis vinifera]
          Length = 185

 Score =  217 bits (553), Expect = 7e-55
 Identities = 104/128 (81%), Positives = 112/128 (87%)
 Frame = +1

Query: 1   SMKIVLNFFVERRWDFRILFASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLI 180
           S+K+VLNFFVER+WD RI+FASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLI
Sbjct: 56  SVKVVLNFFVERKWDLRIMFASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLI 115

Query: 181 VMYDAIGVRRHAGMQAEVLNMIIADLFQGHPISQRKLKELLGHTPSQXXXXXXXXXXXXC 360
           VMYDA GVRRHAGMQAEVLNMI+ DLF+GHPISQRKLKE+LGHTPSQ            C
Sbjct: 116 VMYDATGVRRHAGMQAEVLNMIVEDLFKGHPISQRKLKEILGHTPSQVLAGAVLGIVIAC 175

Query: 361 ICCRGSLV 384
           ICC+G LV
Sbjct: 176 ICCQGCLV 183


>ref|XP_002301410.1| predicted protein [Populus trichocarpa] gi|222843136|gb|EEE80683.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  216 bits (549), Expect = 2e-54
 Identities = 103/128 (80%), Positives = 110/128 (85%)
 Frame = +1

Query: 1   SMKIVLNFFVERRWDFRILFASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLI 180
           SMK+ LNFFVER+WD R+LFASGGMPSSH+ALCTALTTSVA CHGVADSLFPVCLGFSLI
Sbjct: 46  SMKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVAFCHGVADSLFPVCLGFSLI 105

Query: 181 VMYDAIGVRRHAGMQAEVLNMIIADLFQGHPISQRKLKELLGHTPSQXXXXXXXXXXXXC 360
           VMYDAIGVRRHAGMQAEVLNMI+ DLFQGHPISQRKLKELLGH PSQ            C
Sbjct: 106 VMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHNPSQVLAGALLGILVAC 165

Query: 361 ICCRGSLV 384
           +CC+G LV
Sbjct: 166 VCCQGCLV 173


>ref|XP_002876638.1| hypothetical protein ARALYDRAFT_907735 [Arabidopsis lyrata subsp.
           lyrata] gi|297322476|gb|EFH52897.1| hypothetical protein
           ARALYDRAFT_907735 [Arabidopsis lyrata subsp. lyrata]
          Length = 285

 Score =  213 bits (543), Expect = 1e-53
 Identities = 102/130 (78%), Positives = 112/130 (86%)
 Frame = +1

Query: 1   SMKIVLNFFVERRWDFRILFASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLI 180
           S K+V+NFF+ER+WDFR+L+ASGGMPSSH+ALC ALTTSVALCHGVADSLFPVCLGFSLI
Sbjct: 156 SSKMVINFFIERKWDFRLLYASGGMPSSHSALCMALTTSVALCHGVADSLFPVCLGFSLI 215

Query: 181 VMYDAIGVRRHAGMQAEVLNMIIADLFQGHPISQRKLKELLGHTPSQXXXXXXXXXXXXC 360
           VMYDAIGVRRHAGMQAEVLN+II DLF+GHPISQRKLKELLGHTPSQ            C
Sbjct: 216 VMYDAIGVRRHAGMQAEVLNLIIRDLFEGHPISQRKLKELLGHTPSQVLAGALVGVVIAC 275

Query: 361 ICCRGSLVPA 390
            CC+G LV A
Sbjct: 276 FCCQGYLVSA 285


>emb|CAB71107.1| putative protein [Arabidopsis thaliana]
          Length = 197

 Score =  212 bits (540), Expect = 2e-53
 Identities = 101/128 (78%), Positives = 111/128 (86%)
 Frame = +1

Query: 1   SMKIVLNFFVERRWDFRILFASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLI 180
           S K+V+NFF+ER+WDFR+L+ASGGMPSSH+ALC ALTTSVALCHGVADSLFPVCLGFSLI
Sbjct: 68  SSKMVINFFIERKWDFRLLYASGGMPSSHSALCMALTTSVALCHGVADSLFPVCLGFSLI 127

Query: 181 VMYDAIGVRRHAGMQAEVLNMIIADLFQGHPISQRKLKELLGHTPSQXXXXXXXXXXXXC 360
           VMYDAIGVRRHAGMQAEVLN+II DLF+GHPISQRKLKELLGHTPSQ            C
Sbjct: 128 VMYDAIGVRRHAGMQAEVLNLIIRDLFEGHPISQRKLKELLGHTPSQVLAGALVGIVIAC 187

Query: 361 ICCRGSLV 384
            CC+G LV
Sbjct: 188 FCCQGYLV 195


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