BLASTX nr result

ID: Cimicifuga21_contig00026645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026645
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   197   2e-48
ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   196   6e-48
ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|2...   195   8e-48
emb|CBI15349.3| unnamed protein product [Vitis vinifera]              189   6e-46
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...   189   8e-46

>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Cucumis sativus]
          Length = 1218

 Score =  197 bits (501), Expect = 2e-48
 Identities = 98/177 (55%), Positives = 121/177 (68%)
 Frame = -1

Query: 796  FGFFRILRGSNTILNEESLKLPKYSYISQAVWIRVPNSVRIAVESQNLSFPAGMHAAAHA 617
            FGF+RI +GSN IL+   L LPKYSY SQAVWI VP SV+  V+ +N +F AG+H A+HA
Sbjct: 1047 FGFYRIQKGSNQILDSVDLSLPKYSYNSQAVWIPVPQSVKEEVKRKNFNFRAGLHGASHA 1106

Query: 616  VLNVVPLFIQCSPSDLASECVNPHEITNNCCYKGSMYRRRQVSERLLLYDQHPGGNGISA 437
            +LNVVPL I C+ SDLA EC NPH+              R   ER+LLYDQHPGG G+S 
Sbjct: 1107 LLNVVPLRIICNMSDLAPECANPHD-------------TRYFPERILLYDQHPGGTGMSL 1153

Query: 436  QVQPRFKEIXXXXXXXXXTCRCCGETGCPSCVQLLSCREYNSCLHKNAAIMILKGLL 266
            Q+QP F E+         +CRC GETGCP+CVQ L+C EYN  LHK+AA +I+KG+L
Sbjct: 1154 QIQPVFIELLNAAFELLTSCRCYGETGCPNCVQSLACHEYNEVLHKDAASLIIKGVL 1210


>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Vitis vinifera]
          Length = 1231

 Score =  196 bits (497), Expect = 6e-48
 Identities = 96/177 (54%), Positives = 119/177 (67%)
 Frame = -1

Query: 796  FGFFRILRGSNTILNEESLKLPKYSYISQAVWIRVPNSVRIAVESQNLSFPAGMHAAAHA 617
            FGF RI +GSN + +   L LP YSY SQAVW+RVP SV+ AVE    SF AG+HAA+HA
Sbjct: 1052 FGFRRIWKGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHA 1111

Query: 616  VLNVVPLFIQCSPSDLASECVNPHEITNNCCYKGSMYRRRQVSERLLLYDQHPGGNGISA 437
            VLNVVPL++ C+ SDLA EC NPH+              R + ER+LLYD HPGG G SA
Sbjct: 1112 VLNVVPLYVICNSSDLAPECSNPHD-------------TRYIPERILLYDPHPGGTGFSA 1158

Query: 436  QVQPRFKEIXXXXXXXXXTCRCCGETGCPSCVQLLSCREYNSCLHKNAAIMILKGLL 266
            QV+  F E+         +C C G+TGCP+C+Q L+C EYN  LHK+AAIMI+KG+L
Sbjct: 1159 QVRSHFTELLTAALELLMSCCCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIKGVL 1215


>ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|222859250|gb|EEE96797.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  195 bits (496), Expect = 8e-48
 Identities = 93/177 (52%), Positives = 119/177 (67%)
 Frame = -1

Query: 796 FGFFRILRGSNTILNEESLKLPKYSYISQAVWIRVPNSVRIAVESQNLSFPAGMHAAAHA 617
           FGF+ I RGSN +L+   L LPKYSY SQAVWI VP S++  VE +  SF  G+HAA+HA
Sbjct: 284 FGFYCIQRGSNKVLDTFDLSLPKYSYESQAVWIPVPQSIKKLVEEKQFSFRGGLHAASHA 343

Query: 616 VLNVVPLFIQCSPSDLASECVNPHEITNNCCYKGSMYRRRQVSERLLLYDQHPGGNGISA 437
           +LNVVPL+++C+ SDLA EC NPH+              R   ER+L+YDQHPGG G+S 
Sbjct: 344 LLNVVPLYLRCNSSDLAPECPNPHD-------------SRYFPERILVYDQHPGGTGVSM 390

Query: 436 QVQPRFKEIXXXXXXXXXTCRCCGETGCPSCVQLLSCREYNSCLHKNAAIMILKGLL 266
           Q+QP F E+          C C G+TGCP+CVQ + C EYN  +HK+AAIMIL+G+L
Sbjct: 391 QIQPYFTELLNAALELLTCCHCSGDTGCPNCVQSMVCHEYNEVIHKDAAIMILEGVL 447


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score =  189 bits (480), Expect = 6e-46
 Identities = 96/183 (52%), Positives = 119/183 (65%), Gaps = 6/183 (3%)
 Frame = -1

Query: 796  FGFFRILRGSNTILNEESLKLPKYSYISQAVWIRVPNSVRIAVESQNLSFPAGMHAAAHA 617
            FGF RI +GSN + +   L LP YSY SQAVW+RVP SV+ AVE    SF AG+HAA+HA
Sbjct: 1003 FGFRRIWKGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHA 1062

Query: 616  VLNVVPLFIQCSPSDLASECVNPHEITNNCCYKGSMYRRRQVSERLLLYDQHPGGNGISA 437
            VLNVVPL++ C+ SDLA EC NPH+              R + ER+LLYD HPGG G SA
Sbjct: 1063 VLNVVPLYVICNSSDLAPECSNPHD-------------TRYIPERILLYDPHPGGTGFSA 1109

Query: 436  Q------VQPRFKEIXXXXXXXXXTCRCCGETGCPSCVQLLSCREYNSCLHKNAAIMILK 275
            Q      V+  F E+         +C C G+TGCP+C+Q L+C EYN  LHK+AAIMI+K
Sbjct: 1110 QANTSLSVRSHFTELLTAALELLMSCCCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIK 1169

Query: 274  GLL 266
            G+L
Sbjct: 1170 GVL 1172


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 1189

 Score =  189 bits (479), Expect = 8e-46
 Identities = 93/177 (52%), Positives = 119/177 (67%)
 Frame = -1

Query: 796  FGFFRILRGSNTILNEESLKLPKYSYISQAVWIRVPNSVRIAVESQNLSFPAGMHAAAHA 617
            FGF+RI RG+  IL++  L LPKYSY SQAVWI+VP SV+I+V+     F  G+HAA+HA
Sbjct: 1005 FGFYRIERGTKRILDKCDLSLPKYSYESQAVWIQVPQSVKISVQKY-FPFRKGLHAASHA 1063

Query: 616  VLNVVPLFIQCSPSDLASECVNPHEITNNCCYKGSMYRRRQVSERLLLYDQHPGGNGISA 437
            +L VVPL++ C+ SDLA EC NPH+              R   ER+L+YDQHPGG G+S 
Sbjct: 1064 ILKVVPLYVFCNYSDLAPECPNPHDT-------------RFFPERILVYDQHPGGTGVSV 1110

Query: 436  QVQPRFKEIXXXXXXXXXTCRCCGETGCPSCVQLLSCREYNSCLHKNAAIMILKGLL 266
            Q+QP F E+         +C C G TGCP CVQ ++C EYN  LHKNAAIMI+KG++
Sbjct: 1111 QIQPYFTELLNAALELLTSCHCSGITGCPHCVQSMACHEYNEVLHKNAAIMIIKGVM 1167


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