BLASTX nr result
ID: Cimicifuga21_contig00026645
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00026645 (796 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 197 2e-48 ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 196 6e-48 ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|2... 195 8e-48 emb|CBI15349.3| unnamed protein product [Vitis vinifera] 189 6e-46 ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ... 189 8e-46 >ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase HRQ1-like [Cucumis sativus] Length = 1218 Score = 197 bits (501), Expect = 2e-48 Identities = 98/177 (55%), Positives = 121/177 (68%) Frame = -1 Query: 796 FGFFRILRGSNTILNEESLKLPKYSYISQAVWIRVPNSVRIAVESQNLSFPAGMHAAAHA 617 FGF+RI +GSN IL+ L LPKYSY SQAVWI VP SV+ V+ +N +F AG+H A+HA Sbjct: 1047 FGFYRIQKGSNQILDSVDLSLPKYSYNSQAVWIPVPQSVKEEVKRKNFNFRAGLHGASHA 1106 Query: 616 VLNVVPLFIQCSPSDLASECVNPHEITNNCCYKGSMYRRRQVSERLLLYDQHPGGNGISA 437 +LNVVPL I C+ SDLA EC NPH+ R ER+LLYDQHPGG G+S Sbjct: 1107 LLNVVPLRIICNMSDLAPECANPHD-------------TRYFPERILLYDQHPGGTGMSL 1153 Query: 436 QVQPRFKEIXXXXXXXXXTCRCCGETGCPSCVQLLSCREYNSCLHKNAAIMILKGLL 266 Q+QP F E+ +CRC GETGCP+CVQ L+C EYN LHK+AA +I+KG+L Sbjct: 1154 QIQPVFIELLNAAFELLTSCRCYGETGCPNCVQSLACHEYNEVLHKDAASLIIKGVL 1210 >ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase HRQ1-like [Vitis vinifera] Length = 1231 Score = 196 bits (497), Expect = 6e-48 Identities = 96/177 (54%), Positives = 119/177 (67%) Frame = -1 Query: 796 FGFFRILRGSNTILNEESLKLPKYSYISQAVWIRVPNSVRIAVESQNLSFPAGMHAAAHA 617 FGF RI +GSN + + L LP YSY SQAVW+RVP SV+ AVE SF AG+HAA+HA Sbjct: 1052 FGFRRIWKGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHA 1111 Query: 616 VLNVVPLFIQCSPSDLASECVNPHEITNNCCYKGSMYRRRQVSERLLLYDQHPGGNGISA 437 VLNVVPL++ C+ SDLA EC NPH+ R + ER+LLYD HPGG G SA Sbjct: 1112 VLNVVPLYVICNSSDLAPECSNPHD-------------TRYIPERILLYDPHPGGTGFSA 1158 Query: 436 QVQPRFKEIXXXXXXXXXTCRCCGETGCPSCVQLLSCREYNSCLHKNAAIMILKGLL 266 QV+ F E+ +C C G+TGCP+C+Q L+C EYN LHK+AAIMI+KG+L Sbjct: 1159 QVRSHFTELLTAALELLMSCCCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIKGVL 1215 >ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|222859250|gb|EEE96797.1| predicted protein [Populus trichocarpa] Length = 460 Score = 195 bits (496), Expect = 8e-48 Identities = 93/177 (52%), Positives = 119/177 (67%) Frame = -1 Query: 796 FGFFRILRGSNTILNEESLKLPKYSYISQAVWIRVPNSVRIAVESQNLSFPAGMHAAAHA 617 FGF+ I RGSN +L+ L LPKYSY SQAVWI VP S++ VE + SF G+HAA+HA Sbjct: 284 FGFYCIQRGSNKVLDTFDLSLPKYSYESQAVWIPVPQSIKKLVEEKQFSFRGGLHAASHA 343 Query: 616 VLNVVPLFIQCSPSDLASECVNPHEITNNCCYKGSMYRRRQVSERLLLYDQHPGGNGISA 437 +LNVVPL+++C+ SDLA EC NPH+ R ER+L+YDQHPGG G+S Sbjct: 344 LLNVVPLYLRCNSSDLAPECPNPHD-------------SRYFPERILVYDQHPGGTGVSM 390 Query: 436 QVQPRFKEIXXXXXXXXXTCRCCGETGCPSCVQLLSCREYNSCLHKNAAIMILKGLL 266 Q+QP F E+ C C G+TGCP+CVQ + C EYN +HK+AAIMIL+G+L Sbjct: 391 QIQPYFTELLNAALELLTCCHCSGDTGCPNCVQSMVCHEYNEVIHKDAAIMILEGVL 447 >emb|CBI15349.3| unnamed protein product [Vitis vinifera] Length = 1188 Score = 189 bits (480), Expect = 6e-46 Identities = 96/183 (52%), Positives = 119/183 (65%), Gaps = 6/183 (3%) Frame = -1 Query: 796 FGFFRILRGSNTILNEESLKLPKYSYISQAVWIRVPNSVRIAVESQNLSFPAGMHAAAHA 617 FGF RI +GSN + + L LP YSY SQAVW+RVP SV+ AVE SF AG+HAA+HA Sbjct: 1003 FGFRRIWKGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHA 1062 Query: 616 VLNVVPLFIQCSPSDLASECVNPHEITNNCCYKGSMYRRRQVSERLLLYDQHPGGNGISA 437 VLNVVPL++ C+ SDLA EC NPH+ R + ER+LLYD HPGG G SA Sbjct: 1063 VLNVVPLYVICNSSDLAPECSNPHD-------------TRYIPERILLYDPHPGGTGFSA 1109 Query: 436 Q------VQPRFKEIXXXXXXXXXTCRCCGETGCPSCVQLLSCREYNSCLHKNAAIMILK 275 Q V+ F E+ +C C G+TGCP+C+Q L+C EYN LHK+AAIMI+K Sbjct: 1110 QANTSLSVRSHFTELLTAALELLMSCCCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIK 1169 Query: 274 GLL 266 G+L Sbjct: 1170 GVL 1172 >ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1189 Score = 189 bits (479), Expect = 8e-46 Identities = 93/177 (52%), Positives = 119/177 (67%) Frame = -1 Query: 796 FGFFRILRGSNTILNEESLKLPKYSYISQAVWIRVPNSVRIAVESQNLSFPAGMHAAAHA 617 FGF+RI RG+ IL++ L LPKYSY SQAVWI+VP SV+I+V+ F G+HAA+HA Sbjct: 1005 FGFYRIERGTKRILDKCDLSLPKYSYESQAVWIQVPQSVKISVQKY-FPFRKGLHAASHA 1063 Query: 616 VLNVVPLFIQCSPSDLASECVNPHEITNNCCYKGSMYRRRQVSERLLLYDQHPGGNGISA 437 +L VVPL++ C+ SDLA EC NPH+ R ER+L+YDQHPGG G+S Sbjct: 1064 ILKVVPLYVFCNYSDLAPECPNPHDT-------------RFFPERILVYDQHPGGTGVSV 1110 Query: 436 QVQPRFKEIXXXXXXXXXTCRCCGETGCPSCVQLLSCREYNSCLHKNAAIMILKGLL 266 Q+QP F E+ +C C G TGCP CVQ ++C EYN LHKNAAIMI+KG++ Sbjct: 1111 QIQPYFTELLNAALELLTSCHCSGITGCPHCVQSMACHEYNEVLHKNAAIMIIKGVM 1167