BLASTX nr result

ID: Cimicifuga21_contig00026601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026601
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26209.3| unnamed protein product [Vitis vinifera]              153   3e-35
ref|XP_002300849.1| predicted protein [Populus trichocarpa] gi|2...   148   1e-33
emb|CAN75990.1| hypothetical protein VITISV_012195 [Vitis vinifera]   146   3e-33
ref|XP_002307579.1| predicted protein [Populus trichocarpa] gi|2...   146   4e-33
ref|XP_002277799.2| PREDICTED: protein FANTASTIC FOUR 3-like [Vi...   145   7e-33

>emb|CBI26209.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  153 bits (387), Expect = 3e-35
 Identities = 98/232 (42%), Positives = 123/232 (53%), Gaps = 21/232 (9%)
 Frame = -3

Query: 638 WSFIQTLTNTTQSVSIDAKEDQQKPYVHPLYKHSASQLSNKSLELCTETLGSETGXXXXX 459
           WSFI  L+N +Q    +A E +Q  YVHPL K SAS LS+KSLE+CTE LGSETG     
Sbjct: 134 WSFIHALSNGSQGQK-EAME-KQCSYVHPLVKRSASTLSDKSLEMCTEDLGSETGTHVVE 191

Query: 458 XXXXXXXXXXXXXXXSPTKERSRVRTTFGCYKKVNYGSFPPPLTSISGSNCYSIRPHREG 279
                           P++E  + R       K N  +FPPPLT+ISGSN   IRPHRE 
Sbjct: 192 NTMFAVPASASEPGDCPSRELLQSRQLLRA-TKANSQNFPPPLTTISGSNSLQIRPHRED 250

Query: 278 GRLVMKAVLVPSPNTCFQAERRDGRLKLHYIKXXXXXXXXXXDLEREEKQVEHE------ 117
           GRL+MKAV     +T FQ ER +GRL+L  +K            + +E+ +E E      
Sbjct: 251 GRLIMKAVKASLAHTLFQVERSEGRLRLCLLKDPTSNLDWQVAAQEKEEDIEEEEEEEEE 310

Query: 116 ---------GNEEDFLD------EEIHGINANAGGEIGVGKIQRPSRCKEGG 6
                    G+E+D  D      EE+ G N   G E+G+ K QRPSRCKEGG
Sbjct: 311 EVVEEEEEDGDEQDEEDGEFNWSEEMEGKNMEVGVEMGMEKYQRPSRCKEGG 362


>ref|XP_002300849.1| predicted protein [Populus trichocarpa] gi|222842575|gb|EEE80122.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  148 bits (373), Expect = 1e-33
 Identities = 92/227 (40%), Positives = 120/227 (52%), Gaps = 16/227 (7%)
 Frame = -3

Query: 638 WSFIQTLTNTTQSVSIDAKEDQQKPYVHPLYKHSASQLSNKSLELCTETLGSETGXXXXX 459
           WSF+Q++ N T   +    E   K YV P +K S+S LS KSLE+CTE LGSETG     
Sbjct: 65  WSFLQSIANNTSQTTT---EKNDKVYVPPNFKSSSSMLSEKSLEMCTEGLGSETGSEGSE 121

Query: 458 XXXXXXXXXXXXXXXSPTKERSRVRTTFGCYKKVNYGSFPPPLTSISGSNCYSIRPHREG 279
                            T+   ++R T    + V   SFPPPL+SISGSN   +RPHREG
Sbjct: 122 SRDGMAFLSLENVDHE-TRAAPKLRETRTTSRSV---SFPPPLSSISGSNNVRVRPHREG 177

Query: 278 GRLVMKAVLVPSPNTCFQAERRDGRLKLHYIKXXXXXXXXXXDLER-----EEKQVEHEG 114
           GRLV++AV V S +    AER DGRL+LH +K            E      EE  V+ +G
Sbjct: 178 GRLVLEAVTVSSCHVHLHAERTDGRLRLHLMKDSSPNNFDNEVQEAEAEYGEEVVVQDDG 237

Query: 113 NEE-----------DFLDEEIHGINANAGGEIGVGKIQRPSRCKEGG 6
            ++           D   EE+ GIN + GGE+G+GK+ RP RCK+ G
Sbjct: 238 GDDQSGDDEAGGGGDICGEELEGINGSVGGEMGMGKLARPGRCKQSG 284


>emb|CAN75990.1| hypothetical protein VITISV_012195 [Vitis vinifera]
          Length = 411

 Score =  146 bits (369), Expect = 3e-33
 Identities = 101/253 (39%), Positives = 124/253 (49%), Gaps = 42/253 (16%)
 Frame = -3

Query: 638 WSFIQTLTNTTQSVSIDAKEDQQKPYVHPLYKHSASQLSNKSLELCTETLGSETGXXXXX 459
           WSFI  L+N +Q    +A E +Q  YVHPL K SAS LS+KSLE+CTE LGSETG     
Sbjct: 144 WSFIHALSNGSQGQK-EAME-KQCSYVHPLVKRSASTLSDKSLEMCTEDLGSETGTHVVE 201

Query: 458 XXXXXXXXXXXXXXXSPTKERSRVRTTFGCYKKVNYGSFPPPLTSISGSNCYSIRPHREG 279
                           P++E  + R       K N  +FPPPLT+ISGSN   IRPHRE 
Sbjct: 202 NTMFAVPASASEPGDCPSRELLQSRQLLRA-TKANSQNFPPPLTTISGSNSLQIRPHRED 260

Query: 278 GRLVMKAVLVPSPNTCFQAERRDGRLKLHYIK--------------------------XX 177
           GRL+MKAV     +T FQ ER +GRL+L  +K                            
Sbjct: 261 GRLIMKAVKASPAHTLFQVERSEGRLRLCLLKDPTSNLDWQVAAQESEGSSDANEREEIE 320

Query: 176 XXXXXXXXDLEREEKQVEHEGNEEDFLD----------------EEIHGINANAGGEIGV 45
                   D+E EE++ E E +EED  D                EE+ G N   G E+G+
Sbjct: 321 NEEEKEEEDIEEEEEEEEEEEDEEDEEDEDGDEQDEEDGEFNWSEEMEGKNMEVGVEMGM 380

Query: 44  GKIQRPSRCKEGG 6
            K QRPSRCKEGG
Sbjct: 381 EKYQRPSRCKEGG 393


>ref|XP_002307579.1| predicted protein [Populus trichocarpa] gi|222857028|gb|EEE94575.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  146 bits (368), Expect = 4e-33
 Identities = 90/227 (39%), Positives = 122/227 (53%), Gaps = 16/227 (7%)
 Frame = -3

Query: 638 WSFIQTLTNTTQSVSIDAKEDQQKPYVHPLYKHSASQLSNKSLELCTETLGSETGXXXXX 459
           WSF+Q++ N T   +    ++  K YV P +K S+S L+ KSLE+CTE+LGSETG     
Sbjct: 59  WSFLQSIANNTSQTT----KENDKVYVPPNFKRSSSMLNEKSLEMCTESLGSETGSEMSE 114

Query: 458 XXXXXXXXXXXXXXXSPTKERSRVRTTFGCYKKVNYGSFPPPLTSISGSNCYSIRPHREG 279
                            T+E  + R      + V   SFPPPL+SISGSN   +RPHREG
Sbjct: 115 SSDDMAVLPLENVNYE-TRETPKSREARRTSRSV---SFPPPLSSISGSNNVRVRPHREG 170

Query: 278 GRLVMKAVLVPSPNTCFQAERRDGRLKLHYIKXXXXXXXXXXDLER-----EEKQVEHEG 114
           GRLV++AV + S +    AER DGRL+LH +           + E      EE  VE +G
Sbjct: 171 GRLVLEAVTISSCHVYLHAERTDGRLRLHLMNHCSSNNFDNEEEEAEAESGEEIVVEEDG 230

Query: 113 NEEDFLD-----------EEIHGINANAGGEIGVGKIQRPSRCKEGG 6
           +++   D           EE+ G + N GGE+G+GK+ RP RCKEGG
Sbjct: 231 DDDQSGDNEAEGGDGIWGEELEGSSVNTGGEMGMGKLARPGRCKEGG 277


>ref|XP_002277799.2| PREDICTED: protein FANTASTIC FOUR 3-like [Vitis vinifera]
          Length = 343

 Score =  145 bits (366), Expect = 7e-33
 Identities = 100/251 (39%), Positives = 124/251 (49%), Gaps = 40/251 (15%)
 Frame = -3

Query: 638 WSFIQTLTNTTQSVSIDAKEDQQKPYVHPLYKHSASQLSNKSLELCTETLGSETGXXXXX 459
           WSFI  L+N +Q    +A E +Q  YVHPL K SAS LS+KSLE+CTE LGSETG     
Sbjct: 78  WSFIHALSNGSQGQK-EAME-KQCSYVHPLVKRSASTLSDKSLEMCTEDLGSETGTHVVE 135

Query: 458 XXXXXXXXXXXXXXXSPTKERSRVRTTFGCYKKVNYGSFPPPLTSISGSNCYSIRPHREG 279
                           P++E  + R       K N  +FPPPLT+ISGSN   IRPHRE 
Sbjct: 136 NTMFAVPASASEPGDCPSRELLQSRQLLRA-TKANSQNFPPPLTTISGSNSLQIRPHRED 194

Query: 278 GRLVMKAVLVPSPNTCFQAERRDGRLKLHYIKXXXXXXXXXXDL---------------- 147
           GRL+MKAV     +T FQ ER +GRL+L  +K                            
Sbjct: 195 GRLIMKAVKASLAHTLFQVERSEGRLRLCLLKDPTSNLDWQVAAQESEGSSDANEREEIE 254

Query: 146 ---EREEKQVEHE---------------GNEEDFLD------EEIHGINANAGGEIGVGK 39
              E+EE+ +E E               G+E+D  D      EE+ G N   G E+G+ K
Sbjct: 255 NEEEKEEEDIEEEEEEEEEEVVEEEEEDGDEQDEEDGEFNWSEEMEGKNMEVGVEMGMEK 314

Query: 38  IQRPSRCKEGG 6
            QRPSRCKEGG
Sbjct: 315 YQRPSRCKEGG 325


Top