BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026599
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...    65   4e-09
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    65   4e-09
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   59   3e-07
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...    58   9e-07
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    57   1e-06

>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/68 (44%), Positives = 44/68 (64%)
 Frame = +3

Query: 18  FFLAMEAMGLLLRVQHEQGKFTLHPKCNEPFITHLTFADDLIIFCGADITTAHAIKEALG 197
           F L M+ +   L +   +G+F LHPKC  P ITHL+FADD+++FC   +++  AI + L 
Sbjct: 208 FVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILD 267

Query: 198 GFRKYSGL 221
            F+K SGL
Sbjct: 268 VFKKGSGL 275


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/68 (44%), Positives = 44/68 (64%)
 Frame = +3

Query: 18  FFLAMEAMGLLLRVQHEQGKFTLHPKCNEPFITHLTFADDLIIFCGADITTAHAIKEALG 197
           F L M+ +   L +   +G+F LHPKC  P ITHL+FADD+++FC   +++  AI + L 
Sbjct: 208 FVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILD 267

Query: 198 GFRKYSGL 221
            F+K SGL
Sbjct: 268 VFKKGSGL 275


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/71 (38%), Positives = 41/71 (57%)
 Frame = +3

Query: 9   PSPFFLAMEAMGLLLRVQHEQGKFTLHPKCNEPFITHLTFADDLIIFCGADITTAHAIKE 188
           P  F ++ME +  +L     + + +LHPKC+ P ITHL FADD++IF   +  +   +K 
Sbjct: 111 PYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKN 170

Query: 189 ALGGFRKYSGL 221
            L  F + SGL
Sbjct: 171 TLDSFSRASGL 181


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/71 (40%), Positives = 40/71 (56%)
 Frame = +3

Query: 9   PSPFFLAMEAMGLLLRVQHEQGKFTLHPKCNEPFITHLTFADDLIIFCGADITTAHAIKE 188
           P  F LAME    LL+ + + G    HPK  +  I+HL FADD+++F     ++ H I E
Sbjct: 659 PYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISE 718

Query: 189 ALGGFRKYSGL 221
           AL  F  +SGL
Sbjct: 719 ALDDFASWSGL 729


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/71 (40%), Positives = 40/71 (56%)
 Frame = +3

Query: 9   PSPFFLAMEAMGLLLRVQHEQGKFTLHPKCNEPFITHLTFADDLIIFCGADITTAHAIKE 188
           P  F LAME    LL+ + + G    HPK  +  I+HL FADD+++F     ++ H I E
Sbjct: 659 PYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISE 718

Query: 189 ALGGFRKYSGL 221
           AL  F  +SGL
Sbjct: 719 ALDDFASWSGL 729