BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026540
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   125   4e-27
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   124   9e-27
ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata sub...   119   3e-25
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   116   2e-24
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   114   1e-23

>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  125 bits (315), Expect = 4e-27
 Identities = 72/144 (50%), Positives = 91/144 (63%), Gaps = 4/144 (2%)
 Frame = -1

Query: 434 ELPRDVISLIFTKIGIMEILNTAQYVCSSWRNLSKEPHFFRSLDLR---DRWDMLDCNLE 264
           ELP DV S+I  K+G +EIL  AQYVCSSWR + ++P  +R +D+R   D WDM D NLE
Sbjct: 19  ELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDM-DYNLE 77

Query: 263 VHGNVEIPKTVC-DVVERSCGQLVELAIGFYATDGLLHYIVDRSNSLKCLRLDSCYRVSD 87
                     +C   V+RSCGQL+   I  + TD LL YI    N L  LRL  C R+SD
Sbjct: 78  ---------ELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISD 128

Query: 86  QGLIELVKKVPSLEELELSNCSFE 15
           +GL+E V K+P LE+LELS CSF+
Sbjct: 129 EGLVEAVSKLPLLEDLELSFCSFD 152


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  124 bits (312), Expect = 9e-27
 Identities = 62/139 (44%), Positives = 94/139 (67%)
 Frame = -1

Query: 434 ELPRDVISLIFTKIGIMEILNTAQYVCSSWRNLSKEPHFFRSLDLRDRWDMLDCNLEVHG 255
           ELPRDV S+I +K+  +EIL++AQ+VCS WR L +EP  +R++D+ +  D+ D   ++  
Sbjct: 22  ELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGDLCDLGYDLE- 80

Query: 254 NVEIPKTVCDVVERSCGQLVELAIGFYATDGLLHYIVDRSNSLKCLRLDSCYRVSDQGLI 75
                +     V+RS GQL+ + I  +ATD LL+YI+DRS+ ++ LRL SCY +SD GL 
Sbjct: 81  -----EMARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGISDDGLS 135

Query: 74  ELVKKVPSLEELELSNCSF 18
           E +K++P L E++L  CSF
Sbjct: 136 EGIKRLPLLVEIDLCYCSF 154


>ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320679|gb|EFH51101.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  119 bits (299), Expect = 3e-25
 Identities = 64/139 (46%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
 Frame = -1

Query: 434 ELPRDVISLIFTKIGIMEILNTAQYVCSSWRNLSKEPHFFRSLDLRDRWDMLDCNLEVHG 255
           ELP ++ SLI  ++G +EIL  AQ VC SWR + K+P  +R +D+ +  D+ D       
Sbjct: 20  ELPPELTSLILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLEDMEF---- 75

Query: 254 NVEIPKTVC-DVVERSCGQLVELAIGFYATDGLLHYIVDRSNSLKCLRLDSCYRVSDQGL 78
           N++I   +C   V+RS G LVE+ I ++ TDGLL+YI DRS++L+ LRL  C +++D GL
Sbjct: 76  NLDI---MCRHAVDRSQGGLVEIDIWYFGTDGLLNYIADRSSNLRSLRLTRCSQITDDGL 132

Query: 77  IELVKKVPSLEELELSNCS 21
           +E V K+P LE+LELS CS
Sbjct: 133 VEAVLKLPLLEDLELSYCS 151


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 1/174 (0%)
 Frame = -1

Query: 530 SPPTTAEEEEGGKWLIDNYXXXXXXXXXXXFHELPRDVISLIFTKIGIMEILNTAQYVCS 351
           SPP   +E+    W                  ELPRDV +LI  K+G  +IL +AQ+VCS
Sbjct: 6   SPPPQLQEDSYRNWA-----------------ELPRDVTALILDKVGAFDILGSAQFVCS 48

Query: 350 SWRNLSKEPHFFRSLDLRDRWDMLDCNLEVHGNVEIPKTVC-DVVERSCGQLVELAIGFY 174
           SW ++ K+P  +RS+++    D  D   ++       + +C + V+RS G L+ ++I ++
Sbjct: 49  SWNSVCKDPSMWRSVEIHPLCDFWDLPFDL-------EALCRNAVDRSRGGLISISIEYF 101

Query: 173 ATDGLLHYIVDRSNSLKCLRLDSCYRVSDQGLIELVKKVPSLEELELSNCSFET 12
           ATD L+ YI DRS+ LK LRL S Y +SD    +  KK P LEEL++S CS  T
Sbjct: 102 ATDSLIKYIADRSSHLKRLRLLSSYTLSDAAFSKAAKKFPLLEELDISYCSLST 155


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  114 bits (285), Expect = 1e-23
 Identities = 58/139 (41%), Positives = 88/139 (63%)
 Frame = -1

Query: 434 ELPRDVISLIFTKIGIMEILNTAQYVCSSWRNLSKEPHFFRSLDLRDRWDMLDCNLEVHG 255
           +LPRDV+  IF K+G +EIL  AQ VCS WR +SKEP  +R++D+R+  D       +  
Sbjct: 22  DLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRNSGD-------IET 74

Query: 254 NVEIPKTVCDVVERSCGQLVELAIGFYATDGLLHYIVDRSNSLKCLRLDSCYRVSDQGLI 75
           N          ++ S G L+ + I ++ATD LL +I   +++L+ LRL  CY++SD+GL 
Sbjct: 75  NFVFLAMCHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLACCYQISDEGLC 134

Query: 74  ELVKKVPSLEELELSNCSF 18
           E+ K++P LEEL++S  SF
Sbjct: 135 EIAKELPQLEELDISISSF 153