BLASTX nr result

ID: Cimicifuga21_contig00026522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026522
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536438.1| PREDICTED: ABC transporter C family member 1...    77   3e-12
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...    76   5e-12
emb|CBI22551.3| unnamed protein product [Vitis vinifera]               76   5e-12
emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]    76   5e-12
ref|XP_003564286.1| PREDICTED: ABC transporter C family member 1...    76   7e-12

>ref|XP_003536438.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1479

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
 Frame = -3

Query: 178  ILWVSSGRIVF--EQ*RYYFASAKELMWINGTTKSMLANHLSESMAGATTIRAFRKEDRF 5
            +L+VS   I F     RYYFASAKELM +NGTTKS +ANHL+ES+AGA TIRAF +EDRF
Sbjct: 1054 VLFVSIPMIYFAISLQRYYFASAKELMRLNGTTKSFVANHLAESVAGAVTIRAFEEEDRF 1113

Query: 4    F 2
            F
Sbjct: 1114 F 1114



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -1

Query: 672  VGATINTYSNLGVLAVVTWQVLFVSIPMVYLAIWLQ 565
            VGAT+N Y+NL VLAVVTWQVLFVSIPM+Y AI LQ
Sbjct: 1034 VGATMNCYANLTVLAVVTWQVLFVSIPMIYFAISLQ 1069


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = -3

Query: 136  RYYFASAKELMWINGTTKSMLANHLSESMAGATTIRAFRKEDRFF 2
            RYYFASAKELM INGTTKS++ANHL+ES+AGA TIRAF +E+RFF
Sbjct: 1123 RYYFASAKELMRINGTTKSLVANHLAESIAGAMTIRAFEEEERFF 1167



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -1

Query: 669  GATINTYSNLGVLAVVTWQVLFVSIPMVYLAIWLQ 565
            GAT N YSNLGVLAVVTWQVLFVSIPM+Y+AI LQ
Sbjct: 1088 GATTNAYSNLGVLAVVTWQVLFVSIPMIYVAIRLQ 1122


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = -3

Query: 136  RYYFASAKELMWINGTTKSMLANHLSESMAGATTIRAFRKEDRFF 2
            RYYFASAKELM INGTTKS++ANHL+ES+AGA TIRAF +E+RFF
Sbjct: 986  RYYFASAKELMRINGTTKSLVANHLAESIAGAMTIRAFEEEERFF 1030



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -1

Query: 669  GATINTYSNLGVLAVVTWQVLFVSIPMVYLAIWLQ 565
            GAT N YSNLGVLAVVTWQVLFVSIPM+Y+AI LQ
Sbjct: 951  GATTNAYSNLGVLAVVTWQVLFVSIPMIYVAIRLQ 985


>emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]
          Length = 1480

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = -3

Query: 136  RYYFASAKELMWINGTTKSMLANHLSESMAGATTIRAFRKEDRFF 2
            RYYFASAKELM INGTTKS++ANHL+ES+AGA TIRAF +E+RFF
Sbjct: 1071 RYYFASAKELMRINGTTKSLVANHLAESIAGAMTIRAFEEEERFF 1115



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -1

Query: 669  GATINTYSNLGVLAVVTWQVLFVSIPMVYLAIWLQ 565
            GAT N YSNLGVLAVVTWQVLFVSIPM+Y+AI LQ
Sbjct: 1036 GATTNAYSNLGVLAVVTWQVLFVSIPMIYVAIRLQ 1070


>ref|XP_003564286.1| PREDICTED: ABC transporter C family member 10-like isoform 2
            [Brachypodium distachyon]
          Length = 1217

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
 Frame = -3

Query: 232  YTFLSGYISNLNETLQTSILWVSSGRIVFEQ*----------RYYFASAKELMWINGTTK 83
            +TF+    ++LN      +L V +  ++F             RYY ASAKELM INGTTK
Sbjct: 790  FTFMFSVSASLNAYSNLGVLAVVTWEVLFVSVPMIVLAIRLQRYYLASAKELMRINGTTK 849

Query: 82   SMLANHLSESMAGATTIRAFRKEDRFF 2
            S LANHL ES++GA TIRAF +EDRFF
Sbjct: 850  SALANHLGESISGAITIRAFEEEDRFF 876



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = -1

Query: 672 VGATINTYSNLGVLAVVTWQVLFVSIPMVYLAIWLQ 565
           V A++N YSNLGVLAVVTW+VLFVS+PM+ LAI LQ
Sbjct: 796 VSASLNAYSNLGVLAVVTWEVLFVSVPMIVLAIRLQ 831


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