BLASTX nr result

ID: Cimicifuga21_contig00026521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026521
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299907.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002313340.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002513500.1| conserved hypothetical protein [Ricinus comm...    82   6e-14
ref|XP_002529632.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_002322706.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13

>ref|XP_002299907.1| predicted protein [Populus trichocarpa] gi|222847165|gb|EEE84712.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/65 (58%), Positives = 53/65 (81%)
 Frame = +2

Query: 152 DSNGFEVSSSDCSTPKAQRHRIPKIESCPPAPKKRRVLDLHCSSQRSPIPFFALPDVELF 331
           D  G ++S+S CSTPKA+R RIP+I++CPPAP+K R++  +CS QR PI FFA PD+ELF
Sbjct: 59  DFEGVDISASACSTPKAERFRIPEIQTCPPAPRKERIIS-NCSLQRRPIAFFAPPDLELF 117

Query: 332 FYFAV 346
           F++A+
Sbjct: 118 FFYAI 122


>ref|XP_002313340.1| predicted protein [Populus trichocarpa] gi|222849748|gb|EEE87295.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/66 (57%), Positives = 55/66 (83%)
 Frame = +2

Query: 152 DSNGFEVSSSDCSTPKAQRHRIPKIESCPPAPKKRRVLDLHCSSQRSPIPFFALPDVELF 331
           D  G ++S+S CSTPKA+R RIP+I++CPPAP+K+R++ + CS QR PI FFA PD+ELF
Sbjct: 61  DVEGVDISTSACSTPKAERFRIPEIQTCPPAPRKQRMISI-CSLQRRPIAFFAPPDLELF 119

Query: 332 FYFAVQ 349
           F++A++
Sbjct: 120 FFYALR 125


>ref|XP_002513500.1| conserved hypothetical protein [Ricinus communis]
           gi|223547408|gb|EEF48903.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/83 (50%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
 Frame = +2

Query: 98  LPYSSTKPMTIHEDE-DIRDSNGFEVSSSDCSTPKAQRHRIPKIESCPPAPKKRRVLDLH 274
           LP SS+   ++  D  D    +    ++S CSTPKAQ+ RIP+I +CPPAPKK+R++  +
Sbjct: 53  LPSSSSTTTSLKIDGFDFEGVDDHISTTSPCSTPKAQKFRIPEIVTCPPAPKKQRMIS-N 111

Query: 275 CSSQRSPIPFFALPDVELFFYFA 343
           CS QR PI FFA PD+ELFF++A
Sbjct: 112 CSLQRRPIAFFAPPDIELFFFYA 134


>ref|XP_002529632.1| conserved hypothetical protein [Ricinus communis]
           gi|223530917|gb|EEF32777.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 129

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 7/96 (7%)
 Frame = +2

Query: 77  NQDKPMALPYSSTKPMTIHEDEDIRD-------SNGFEVSSSDCSTPKAQRHRIPKIESC 235
           + D  +   Y++T      +D+++++       S+  + SSS CSTPKAQR +IPK+ SC
Sbjct: 29  SMDIDLPCDYTTTSNSWSCKDQEVQEVKEGKATSSTSDCSSSSCSTPKAQRFKIPKLLSC 88

Query: 236 PPAPKKRRVLDLHCSSQRSPIPFFALPDVELFFYFA 343
           PPAP KRRV   + SS+ SPI FFA PD+ELFF  A
Sbjct: 89  PPAPMKRRVAS-NWSSKISPITFFASPDIELFFLLA 123


>ref|XP_002322706.1| predicted protein [Populus trichocarpa] gi|222867336|gb|EEF04467.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
 Frame = +2

Query: 98  LPYSSTKPMTIHEDE---DIRDSNGFEVSSSDCSTPKAQRHRIPKIESCPPAPKKRRVLD 268
           LP S +   T  ++    +I D  G +     CSTPKAQR +IP+I SCPPAP KRR   
Sbjct: 28  LPCSHSTTSTSSKESCTVNINDQEG-DKDIVGCSTPKAQRFKIPEILSCPPAPMKRRA-T 85

Query: 269 LHCSSQRSPIPFFALPDVELFFYFA 343
             CSS++SPI FFA PD+ELFF+FA
Sbjct: 86  TKCSSKKSPIVFFAPPDIELFFFFA 110


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