BLASTX nr result

ID: Cimicifuga21_contig00026511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026511
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618121.1| Major centromere autoantigen B [Medicago tru...   110   1e-28
ref|XP_003619048.1| Tigger transposable element-derived protein ...   109   2e-28
ref|XP_003601771.1| Tigger transposable element-derived protein ...   109   2e-28
ref|XP_003516939.1| PREDICTED: ARS-binding protein 1-like [Glyci...   109   2e-28
ref|XP_003604271.1| Tigger transposable element-derived protein ...   109   3e-28

>ref|XP_003618121.1| Major centromere autoantigen B [Medicago truncatula]
           gi|355519456|gb|AET01080.1| Major centromere autoantigen
           B [Medicago truncatula]
          Length = 488

 Score =  110 bits (275), Expect(2) = 1e-28
 Identities = 56/72 (77%), Positives = 59/72 (81%)
 Frame = +2

Query: 17  SSNDEGLKNVELFFLPPNMTSKI*PCHAGIIRAFKMHYRR*FYHNLLEGCEVGQPIPEKT 196
           S N EGL+NVELFFLPPNMTSKI PC AGIIRAFKMHYRR FY  +LEG EVGQ  P K 
Sbjct: 292 SRNIEGLRNVELFFLPPNMTSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKI 351

Query: 197 NVLDAMNLAISA 232
           NVLDA+NLAI A
Sbjct: 352 NVLDAINLAIPA 363



 Score = 41.2 bits (95), Expect(2) = 1e-28
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +3

Query: 240 DVQGNTIANCFQHCKIRSADNMASENLDEPLY 335
           DV+  TIANCF+HCKIRSA ++   NLDE  +
Sbjct: 367 DVRKETIANCFRHCKIRSASDVVG-NLDESTF 397


>ref|XP_003619048.1| Tigger transposable element-derived protein [Medicago truncatula]
           gi|355494063|gb|AES75266.1| Tigger transposable
           element-derived protein [Medicago truncatula]
          Length = 498

 Score =  109 bits (272), Expect(2) = 2e-28
 Identities = 55/70 (78%), Positives = 58/70 (82%)
 Frame = +2

Query: 23  NDEGLKNVELFFLPPNMTSKI*PCHAGIIRAFKMHYRR*FYHNLLEGCEVGQPIPEKTNV 202
           N EGL+NVELFFLPPNMTSKI PC AGIIRAFKMHYRR FY  +LEG EVGQ  P K NV
Sbjct: 271 NIEGLRNVELFFLPPNMTSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINV 330

Query: 203 LDAMNLAISA 232
           LDA+NLAI A
Sbjct: 331 LDAINLAIPA 340



 Score = 41.2 bits (95), Expect(2) = 2e-28
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +3

Query: 240 DVQGNTIANCFQHCKIRSADNMASENLDEPLY 335
           DV+  TIANCF+HCKIRSA ++   NLDE  +
Sbjct: 344 DVRKETIANCFRHCKIRSASDVVG-NLDESTF 374


>ref|XP_003601771.1| Tigger transposable element-derived protein [Medicago truncatula]
           gi|355490819|gb|AES72022.1| Tigger transposable
           element-derived protein [Medicago truncatula]
          Length = 488

 Score =  109 bits (272), Expect(2) = 2e-28
 Identities = 55/70 (78%), Positives = 58/70 (82%)
 Frame = +2

Query: 23  NDEGLKNVELFFLPPNMTSKI*PCHAGIIRAFKMHYRR*FYHNLLEGCEVGQPIPEKTNV 202
           N EGL+NVELFFLPPNMTSKI PC AGIIRAFKMHYRR FY  +LEG EVGQ  P K NV
Sbjct: 294 NIEGLRNVELFFLPPNMTSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINV 353

Query: 203 LDAMNLAISA 232
           LDA+NLAI A
Sbjct: 354 LDAINLAIPA 363



 Score = 41.2 bits (95), Expect(2) = 2e-28
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +3

Query: 240 DVQGNTIANCFQHCKIRSADNMASENLDEPLY 335
           DV+  TIANCF+HCKIRSA ++   NLDE  +
Sbjct: 367 DVRKETIANCFRHCKIRSASDVVG-NLDESTF 397


>ref|XP_003516939.1| PREDICTED: ARS-binding protein 1-like [Glycine max]
          Length = 247

 Score =  109 bits (273), Expect(2) = 2e-28
 Identities = 58/81 (71%), Positives = 61/81 (75%)
 Frame = +2

Query: 23  NDEGLKNVELFFLPPNMTSKI*PCHAGIIRAFKMHYRR*FYHNLLEGCEVGQPIPEKTNV 202
           N EGL+NVELFFLPPNMTSKI PC AGIIRAFKMHYRR FY  +LEG EVGQ  P K NV
Sbjct: 20  NIEGLRNVELFFLPPNMTSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINV 79

Query: 203 LDAMNLAISALERCPRKYNCE 265
           LDA+NLAI A     RK   E
Sbjct: 80  LDAINLAIPAWTIDVRKETIE 100



 Score = 40.8 bits (94), Expect(2) = 2e-28
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 240 DVQGNTIANCFQHCKIRSADNMASENLDEPLY 335
           DV+  TI NCFQHCKIRS  ++A  NLDE  +
Sbjct: 93  DVRKETIENCFQHCKIRSTSDVA-RNLDESTF 123


>ref|XP_003604271.1| Tigger transposable element-derived protein [Medicago truncatula]
           gi|355505326|gb|AES86468.1| Tigger transposable
           element-derived protein [Medicago truncatula]
          Length = 414

 Score =  109 bits (272), Expect(2) = 3e-28
 Identities = 55/70 (78%), Positives = 58/70 (82%)
 Frame = +2

Query: 23  NDEGLKNVELFFLPPNMTSKI*PCHAGIIRAFKMHYRR*FYHNLLEGCEVGQPIPEKTNV 202
           N EGL+NVELFFLPPNMTSKI PC AGIIRAFKMHYRR FY  +LEG EVGQ  P K NV
Sbjct: 187 NIEGLRNVELFFLPPNMTSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINV 246

Query: 203 LDAMNLAISA 232
           LDA+NLAI A
Sbjct: 247 LDAINLAIPA 256



 Score = 40.8 bits (94), Expect(2) = 3e-28
 Identities = 18/32 (56%), Positives = 24/32 (75%)
 Frame = +3

Query: 240 DVQGNTIANCFQHCKIRSADNMASENLDEPLY 335
           D++  TIANCF+HCKIRSA ++   NLDE  +
Sbjct: 260 DIRKETIANCFRHCKIRSASDVVG-NLDESTF 290


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