BLASTX nr result

ID: Cimicifuga21_contig00026495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026495
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vi...   313   2e-83
ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago trun...   311   6e-83
ref|XP_003527915.1| PREDICTED: tRNA modification GTPase MnmE-lik...   311   8e-83
ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-lik...   311   8e-83
ref|XP_004140317.1| PREDICTED: tRNA modification GTPase MnmE-lik...   308   7e-82

>ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vitis vinifera]
           gi|302141924|emb|CBI19127.3| unnamed protein product
           [Vitis vinifera]
          Length = 571

 Score =  313 bits (802), Expect = 2e-83
 Identities = 158/196 (80%), Positives = 176/196 (89%)
 Frame = -1

Query: 590 GIQGGFSKLVKSLRTQCIELLTEIEARLDFDDEMPSLDSNSLMDMIHAMCLEVEKALETA 411
           GIQGGFS LV+SLR QCIELLTEIEARLDFDDEMP LD N +MD IH+M  +VE ALETA
Sbjct: 257 GIQGGFSSLVRSLRIQCIELLTEIEARLDFDDEMPPLDLNLIMDKIHSMSQDVENALETA 316

Query: 410 NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEASINVHGIPIT 231
           NYD+LLQSGLQIAI+GRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEAS+++HGIP+T
Sbjct: 317 NYDQLLQSGLQIAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEASVSIHGIPVT 376

Query: 230 LLDTAGIRETNDIVEKIGVERSETVAMGADVIIMTVSALDGWTSDDAELLQRIQVNQKAT 51
           LLDTAGIRET+DIVEKIGVERSE VA+ ADVIIMT+SALDGWTS D +L  RI  N+K  
Sbjct: 377 LLDTAGIRETDDIVEKIGVERSEAVAISADVIIMTISALDGWTSQDTKLFNRIISNKKFV 436

Query: 50  HSSTPMILVISKIDCA 3
            SSTP+ILV++KIDCA
Sbjct: 437 ESSTPVILVVNKIDCA 452


>ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago truncatula]
           gi|355504724|gb|AES85927.1| tRNA modification GTPase
           mnmE [Medicago truncatula]
          Length = 543

 Score =  311 bits (797), Expect = 6e-83
 Identities = 157/195 (80%), Positives = 179/195 (91%)
 Frame = -1

Query: 590 GIQGGFSKLVKSLRTQCIELLTEIEARLDFDDEMPSLDSNSLMDMIHAMCLEVEKALETA 411
           GIQGGFS LV+SLR QCI+LLTEIEARLDF+DEMP LD N +MD IH M  +VE ALETA
Sbjct: 226 GIQGGFSSLVRSLRNQCIDLLTEIEARLDFEDEMPPLDLNGIMDKIHHMSQDVENALETA 285

Query: 410 NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEASINVHGIPIT 231
           NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDV+EASIN++GIPIT
Sbjct: 286 NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASININGIPIT 345

Query: 230 LLDTAGIRETNDIVEKIGVERSETVAMGADVIIMTVSALDGWTSDDAELLQRIQVNQKAT 51
           LLDTAGIR+T+DIVEKIGVERSE VA GAD+IIMTVSA++GWTS+D +LL+RIQ  +++T
Sbjct: 346 LLDTAGIRDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDTKLLERIQSAKEST 405

Query: 50  HSSTPMILVISKIDC 6
            SSTP+ILV++KIDC
Sbjct: 406 GSSTPVILVVNKIDC 420


>ref|XP_003527915.1| PREDICTED: tRNA modification GTPase MnmE-like [Glycine max]
          Length = 548

 Score =  311 bits (796), Expect = 8e-83
 Identities = 160/195 (82%), Positives = 177/195 (90%)
 Frame = -1

Query: 590 GIQGGFSKLVKSLRTQCIELLTEIEARLDFDDEMPSLDSNSLMDMIHAMCLEVEKALETA 411
           GIQGGFS LV+SLR+QCIELLTEIEARLDFDDEMP LD N  MD IH M  EVE ALETA
Sbjct: 232 GIQGGFSSLVRSLRSQCIELLTEIEARLDFDDEMPPLDLNLTMDKIHNMSREVENALETA 291

Query: 410 NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEASINVHGIPIT 231
           NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDV+EASI+V GIPIT
Sbjct: 292 NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPIT 351

Query: 230 LLDTAGIRETNDIVEKIGVERSETVAMGADVIIMTVSALDGWTSDDAELLQRIQVNQKAT 51
           LLDTAGIR+T+DIVEKIGVERSE VA GAD+IIMTVSA++GWTS+D +LL+RIQ  + +T
Sbjct: 352 LLDTAGIRDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDTKLLERIQSTKGST 411

Query: 50  HSSTPMILVISKIDC 6
            SSTP+ILV++KIDC
Sbjct: 412 GSSTPVILVVNKIDC 426


>ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-like [Glycine max]
          Length = 520

 Score =  311 bits (796), Expect = 8e-83
 Identities = 159/195 (81%), Positives = 178/195 (91%)
 Frame = -1

Query: 590 GIQGGFSKLVKSLRTQCIELLTEIEARLDFDDEMPSLDSNSLMDMIHAMCLEVEKALETA 411
           GIQGGFS LV+SLR+QCIELLTEIEARLDFDDEMP LD N +MD IH M  EVE ALETA
Sbjct: 204 GIQGGFSSLVRSLRSQCIELLTEIEARLDFDDEMPPLDLNLIMDKIHNMSREVENALETA 263

Query: 410 NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEASINVHGIPIT 231
           NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDV+EASI+V GIPIT
Sbjct: 264 NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPIT 323

Query: 230 LLDTAGIRETNDIVEKIGVERSETVAMGADVIIMTVSALDGWTSDDAELLQRIQVNQKAT 51
           LLDTAGIR+T+DIVEKIGVERSE VA GAD+IIMT+SA++GWTS+D +LL+RIQ  + +T
Sbjct: 324 LLDTAGIRDTDDIVEKIGVERSEAVARGADLIIMTMSAVEGWTSEDTKLLERIQSTKGST 383

Query: 50  HSSTPMILVISKIDC 6
            SSTP+ILV++KIDC
Sbjct: 384 GSSTPVILVVNKIDC 398


>ref|XP_004140317.1| PREDICTED: tRNA modification GTPase MnmE-like [Cucumis sativus]
           gi|449526047|ref|XP_004170026.1| PREDICTED: tRNA
           modification GTPase MnmE-like [Cucumis sativus]
          Length = 561

 Score =  308 bits (788), Expect = 7e-82
 Identities = 156/196 (79%), Positives = 174/196 (88%)
 Frame = -1

Query: 590 GIQGGFSKLVKSLRTQCIELLTEIEARLDFDDEMPSLDSNSLMDMIHAMCLEVEKALETA 411
           GIQGGFS LVKSLRTQCIELLTEIEARLDFDDEMP LD N +M+ +HAM  EVE ALETA
Sbjct: 246 GIQGGFSSLVKSLRTQCIELLTEIEARLDFDDEMPPLDLNIVMEKVHAMSQEVETALETA 305

Query: 410 NYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEASINVHGIPIT 231
           NYDKLLQSG+QIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDV+EA++ V GIP+T
Sbjct: 306 NYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTVSGIPVT 365

Query: 230 LLDTAGIRETNDIVEKIGVERSETVAMGADVIIMTVSALDGWTSDDAELLQRIQVNQKAT 51
           LLDTAGIRET+DIVEKIGVERSE  A+GADVIIM +SALDGWT++D  LL RI   +K+ 
Sbjct: 366 LLDTAGIRETDDIVEKIGVERSEAAALGADVIIMAISALDGWTAEDTILLNRILSKKKSD 425

Query: 50  HSSTPMILVISKIDCA 3
            S TP++LVI+KIDCA
Sbjct: 426 ESCTPILLVINKIDCA 441


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